RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 CCDC88AQ3V6T2 1871 aa29.89■■■□□ 2.37
CDKN2A-208ENST00000498124 ZNF622Q969S3 477 aaKnown RBP eCLIP29.88■■■□□ 2.37
CDKN2A-208ENST00000498124 KDM2BQ8NHM5 1336 aa29.88■■■□□ 2.37
CDKN2A-208ENST00000498124 CACNA1SQ13698 1873 aa29.87■■■□□ 2.37
CDKN2A-208ENST00000498124 SLX4Q8IY92 1834 aa29.86■■■□□ 2.37
CDKN2A-208ENST00000498124 RGL2O15211 777 aa29.85■■■□□ 2.37
CDKN2A-208ENST00000498124 NEFMP07197 916 aa29.85■■■□□ 2.37
CDKN2A-208ENST00000498124 ST5P78524 1137 aa29.85■■■□□ 2.37
CDKN2A-208ENST00000498124 SRGNP10124 158 aa29.84■■■□□ 2.37
CDKN2A-208ENST00000498124 RBM46Q8TBY0 533 aaKnown RBP29.84■■■□□ 2.37
CDKN2A-208ENST00000498124 PNISRQ8TF01 805 aaKnown RBP29.84■■■□□ 2.37
CDKN2A-208ENST00000498124 ZNF652Q9Y2D9 606 aa29.84■■■□□ 2.37
CDKN2A-208ENST00000498124 C21orf2O43822 256 aa29.83■■■□□ 2.37
CDKN2A-208ENST00000498124 EIF4A1P60842 406 aaKnown RBP29.83■■■□□ 2.37
CDKN2A-208ENST00000498124 MAPK8IP3Q9UPT6 1336 aa29.82■■■□□ 2.36
CDKN2A-208ENST00000498124 RALBP1Q15311 655 aa29.82■■■□□ 2.36
CDKN2A-208ENST00000498124 STYK1Q6J9G0 422 aa29.82■■■□□ 2.36
CDKN2A-208ENST00000498124 NBPF5PQ86XG9 351 aaPredicted RBP29.82■■■□□ 2.36
CDKN2A-208ENST00000498124 RRAGCQ9HB90 399 aa29.82■■■□□ 2.36
CDKN2A-208ENST00000498124 HLFQ16534 295 aa29.81■■■□□ 2.36
CDKN2A-208ENST00000498124 ZNF219Q9P2Y4 722 aaPredicted RBP29.81■■■□□ 2.36
CDKN2A-208ENST00000498124 DICER1Q9UPY3 1922 aaKnown RBP29.81■■■□□ 2.36
CDKN2A-208ENST00000498124 NPHP1O15259 732 aa29.8■■■□□ 2.36
CDKN2A-208ENST00000498124 PRPF40BQ6NWY9 871 aaKnown RBP29.8■■■□□ 2.36
CDKN2A-208ENST00000498124 NIP7Q9Y221 180 aaKnown RBP eCLIP29.8■■■□□ 2.36
CDKN2A-208ENST00000498124 APLP1P51693 650 aa29.79■■■□□ 2.36
CDKN2A-208ENST00000498124 CNKSR1Q969H4 720 aa29.79■■■□□ 2.36
CDKN2A-208ENST00000498124 MASTLQ96GX5 879 aa29.79■■■□□ 2.36
CDKN2A-208ENST00000498124 WDR90Q96KV7 1748 aa29.79■■■□□ 2.36
CDKN2A-208ENST00000498124 KLRG2A4D1S0 409 aaPredicted RBP29.78■■■□□ 2.36
CDKN2A-208ENST00000498124 GLTPD2A6NH11 291 aa29.78■■■□□ 2.36
CDKN2A-208ENST00000498124 PNNQ9H307 717 aaKnown RBP29.78■■■□□ 2.36
CDKN2A-208ENST00000498124 LTBP3Q9NS15 1303 aa29.77■■■□□ 2.36
CDKN2A-208ENST00000498124 C16orf71Q8IYS4 520 aaPredicted RBP29.77■■■□□ 2.36
CDKN2A-208ENST00000498124 NUP98P52948 1817 aa29.77■■■□□ 2.36
CDKN2A-208ENST00000498124 FSTL1Q12841 308 aa29.74■■■□□ 2.35
CDKN2A-208ENST00000498124 TTLL7Q6ZT98 887 aa29.74■■■□□ 2.35
CDKN2A-208ENST00000498124 C7orf43Q8WVR3 580 aa29.74■■■□□ 2.35
CDKN2A-208ENST00000498124 TPTE2Q6XPS3 522 aa29.73■■■□□ 2.35
CDKN2A-208ENST00000498124 DNAJC5GQ8N7S2 189 aa29.73■■■□□ 2.35
CDKN2A-208ENST00000498124 TAOK3Q9H2K8 898 aa29.73■■■□□ 2.35
CDKN2A-208ENST00000498124 ABCC12Q96J65 1359 aa29.73■■■□□ 2.35
CDKN2A-208ENST00000498124 MAP3K15Q6ZN16 1313 aa29.72■■■□□ 2.35
CDKN2A-208ENST00000498124 FAM177BA6PVY3 158 aa29.72■■■□□ 2.35
CDKN2A-208ENST00000498124 ERVV-1B6SEH8 477 aa29.72■■■□□ 2.35
CDKN2A-208ENST00000498124 NGEFQ8N5V2 710 aa29.72■■■□□ 2.35
CDKN2A-208ENST00000498124 RRP7AQ9Y3A4 280 aaKnown RBP29.72■■■□□ 2.35
CDKN2A-208ENST00000498124 MYBBP1AQ9BQG0 1328 aaKnown RBP29.71■■■□□ 2.35
CDKN2A-208ENST00000498124 NPR1P16066 1061 aa29.71■■■□□ 2.35
CDKN2A-208ENST00000498124 RIPK4P57078 832 aa29.71■■■□□ 2.35
CDKN2A-208ENST00000498124 POTECB2RU33 542 aa29.7■■■□□ 2.35
CDKN2A-208ENST00000498124 TMPOP42166 694 aaKnown RBP29.7■■■□□ 2.35
CDKN2A-208ENST00000498124 TSPYL4Q9UJ04 414 aa29.7■■■□□ 2.35
CDKN2A-208ENST00000498124 MYL6BP14649 208 aa29.69■■■□□ 2.34
CDKN2A-208ENST00000498124 ERFEQ4G0M1 354 aa29.69■■■□□ 2.34
CDKN2A-208ENST00000498124 LRP10Q7Z4F1 713 aa29.69■■■□□ 2.34
CDKN2A-208ENST00000498124 ERBB4Q15303 1308 aa29.69■■■□□ 2.34
CDKN2A-208ENST00000498124 UBN2Q6ZU65 1347 aa29.69■■■□□ 2.34
CDKN2A-208ENST00000498124 VEGFAP15692 232 aaPredicted RBP29.68■■■□□ 2.34
CDKN2A-208ENST00000498124 SOGA3Q5TF21 947 aa29.68■■■□□ 2.34
CDKN2A-208ENST00000498124 HTRA3P83110 453 aa29.67■■■□□ 2.34
CDKN2A-208ENST00000498124 KIF6Q6ZMV9 814 aa29.67■■■□□ 2.34
CDKN2A-208ENST00000498124 IBTKQ9P2D0 1353 aaPredicted RBP29.66■■■□□ 2.34
CDKN2A-208ENST00000498124 SNED1Q8TER0 1413 aa29.66■■■□□ 2.34
CDKN2A-208ENST00000498124 OLFM4Q6UX06 510 aa29.66■■■□□ 2.34
CDKN2A-208ENST00000498124 SMC1BQ8NDV3 1235 aa29.66■■■□□ 2.34
CDKN2A-208ENST00000498124 ZBTB3Q9H5J0 574 aa29.66■■■□□ 2.34
CDKN2A-208ENST00000498124 RIC1Q4ADV7 1423 aa29.65■■■□□ 2.34
CDKN2A-208ENST00000498124 PDIA6Q15084 440 aa29.65■■■□□ 2.34
CDKN2A-208ENST00000498124 CCDC93Q567U6 631 aa29.65■■■□□ 2.34
CDKN2A-208ENST00000498124 NUTM1Q86Y26 1132 aa29.65■■■□□ 2.34
CDKN2A-208ENST00000498124 BABAM1Q9NWV8 329 aa29.65■■■□□ 2.34
CDKN2A-208ENST00000498124 CRY2Q49AN0 593 aa29.64■■■□□ 2.34
CDKN2A-208ENST00000498124 CCDC146Q8IYE0 955 aa29.64■■■□□ 2.34
CDKN2A-208ENST00000498124 GPTP24298 496 aa29.63■■■□□ 2.33
CDKN2A-208ENST00000498124 NYXQ9GZU5 481 aa29.63■■■□□ 2.33
CDKN2A-208ENST00000498124 LMOD3Q0VAK6 560 aa29.62■■■□□ 2.33
CDKN2A-208ENST00000498124 PROSER3Q2NL68 480 aa29.62■■■□□ 2.33
CDKN2A-208ENST00000498124 ZNF34Q8IZ26 560 aa29.62■■■□□ 2.33
CDKN2A-208ENST00000498124 DPY19L2Q6NUT2 758 aa29.61■■■□□ 2.33
CDKN2A-208ENST00000498124 GTF2E1P29083 439 aaPredicted RBP29.6■■■□□ 2.33
CDKN2A-208ENST00000498124 FKBP4Q02790 459 aaKnown RBP eCLIP29.6■■■□□ 2.33
CDKN2A-208ENST00000498124 SUSD4Q5VX71 490 aa29.6■■■□□ 2.33
CDKN2A-208ENST00000498124 GIGYF2Q6Y7W6 1299 aaKnown RBP29.6■■■□□ 2.33
CDKN2A-208ENST00000498124 PRKRIP1Q9H875 184 aaPredicted RBP29.6■■■□□ 2.33
CDKN2A-208ENST00000498124 NTSR2O95665 410 aa29.59■■■□□ 2.33
CDKN2A-208ENST00000498124 ANXA1P04083 346 aa29.59■■■□□ 2.33
CDKN2A-208ENST00000498124 TRIM35Q9UPQ4 493 aa29.59■■■□□ 2.33
CDKN2A-208ENST00000498124 PCNTO95613 3336 aa29.58■■■□□ 2.33
CDKN2A-208ENST00000498124 DDNO94850 711 aaPredicted RBP29.58■■■□□ 2.33
CDKN2A-208ENST00000498124 EIF2S2P20042 333 aaKnown RBP29.58■■■□□ 2.33
CDKN2A-208ENST00000498124 ALDH1B1P30837 517 aa29.57■■■□□ 2.32
CDKN2A-208ENST00000498124 NEUROD2Q15784 382 aa29.57■■■□□ 2.32
CDKN2A-208ENST00000498124 RUNDC1Q96C34 613 aa29.57■■■□□ 2.32
CDKN2A-208ENST00000498124 ZNF277Q9NRM2 450 aaPredicted RBP29.57■■■□□ 2.32
CDKN2A-208ENST00000498124 ANKRD36CQ5JPF3 1778 aa29.57■■■□□ 2.32
CDKN2A-208ENST00000498124 KRT24Q2M2I5 525 aa29.56■■■□□ 2.32
CDKN2A-208ENST00000498124 KLRG1Q96E93 195 aa29.56■■■□□ 2.32
CDKN2A-208ENST00000498124 CHL1O00533 1208 aa29.55■■■□□ 2.32
CDKN2A-208ENST00000498124 HOXA10P31260 410 aaPredicted RBP29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms