RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 ST5P78524 1137 aa15.56■□□□□ 0.08
NUDCD3-211ENST00000497978 PRR5LQ6MZQ0 368 aa15.56■□□□□ 0.08
NUDCD3-211ENST00000497978 CLEC4GQ6UXB4 293 aa15.56■□□□□ 0.08
NUDCD3-211ENST00000497978 MAPK8IP3Q9UPT6 1336 aa15.56■□□□□ 0.08
NUDCD3-211ENST00000497978 SBF1O95248 1867 aa15.55■□□□□ 0.08
NUDCD3-211ENST00000497978 LMNB1P20700 586 aa15.55■□□□□ 0.08
NUDCD3-211ENST00000497978 RASSF7Q02833 373 aa15.55■□□□□ 0.08
NUDCD3-211ENST00000497978 NFE2L2Q16236 605 aa15.55■□□□□ 0.08
NUDCD3-211ENST00000497978 PLEKHF1Q96S99 279 aa15.55■□□□□ 0.08
NUDCD3-211ENST00000497978 BCORQ6W2J9 1755 aa15.54■□□□□ 0.08
NUDCD3-211ENST00000497978 ZC3H4Q9UPT8 1303 aaKnown RBP15.54■□□□□ 0.08
NUDCD3-211ENST00000497978 RALBP1Q15311 655 aa15.54■□□□□ 0.08
NUDCD3-211ENST00000497978 NBPF5PQ86XG9 351 aaPredicted RBP15.54■□□□□ 0.08
NUDCD3-211ENST00000497978 CCDC24Q8N4L8 307 aa15.54■□□□□ 0.08
NUDCD3-211ENST00000497978 MIS18AQ9NYP9 233 aa15.54■□□□□ 0.08
NUDCD3-211ENST00000497978 ANKRD31Q8N7Z5 1873 aa15.54■□□□□ 0.08
NUDCD3-211ENST00000497978 DLG5Q8TDM6 1919 aa15.53■□□□□ 0.08
NUDCD3-211ENST00000497978 RGL2O15211 777 aa15.53■□□□□ 0.08
NUDCD3-211ENST00000497978 CNKSR1Q969H4 720 aa15.53■□□□□ 0.08
NUDCD3-211ENST00000497978 NBPF26B4DH59 902 aa15.52■□□□□ 0.08
NUDCD3-211ENST00000497978 APLP1P51693 650 aa15.52■□□□□ 0.08
NUDCD3-211ENST00000497978 NBPF10Q6P3W6 841 aaKnown RBP15.52■□□□□ 0.08
NUDCD3-211ENST00000497978 NBPF15Q8N660 670 aa15.52■□□□□ 0.08
NUDCD3-211ENST00000497978 RBM46Q8TBY0 533 aaKnown RBP15.52■□□□□ 0.08
NUDCD3-211ENST00000497978 C21orf2O43822 256 aa15.51■□□□□ 0.07
NUDCD3-211ENST00000497978 STYK1Q6J9G0 422 aa15.51■□□□□ 0.07
NUDCD3-211ENST00000497978 TPTE2Q6XPS3 522 aa15.51■□□□□ 0.07
NUDCD3-211ENST00000497978 MASTLQ96GX5 879 aa15.51■□□□□ 0.07
NUDCD3-211ENST00000497978 RRAGCQ9HB90 399 aa15.51■□□□□ 0.07
NUDCD3-211ENST00000497978 SRGNP10124 158 aa15.5■□□□□ 0.07
NUDCD3-211ENST00000497978 NIP7Q9Y221 180 aaKnown RBP eCLIP15.5■□□□□ 0.07
NUDCD3-211ENST00000497978 LAMB4A4D0S4 1761 aa15.49■□□□□ 0.07
NUDCD3-211ENST00000497978 KDM3BQ7LBC6 1761 aa15.49■□□□□ 0.07
NUDCD3-211ENST00000497978 COL11A2P13942 1736 aaPredicted RBP15.49■□□□□ 0.07
NUDCD3-211ENST00000497978 TNRC6CQ9HCJ0 1690 aaKnown RBP15.49■□□□□ 0.07
NUDCD3-211ENST00000497978 NFKBIEO00221 500 aa15.49■□□□□ 0.07
NUDCD3-211ENST00000497978 EIF4A1P60842 406 aaKnown RBP15.49■□□□□ 0.07
NUDCD3-211ENST00000497978 SOGA3Q5TF21 947 aa15.49■□□□□ 0.07
NUDCD3-211ENST00000497978 THUMPD2Q9BTF0 503 aaKnown RBP15.49■□□□□ 0.07
NUDCD3-211ENST00000497978 CCDC88AQ3V6T2 1871 aa15.48■□□□□ 0.07
NUDCD3-211ENST00000497978 GLTPD2A6NH11 291 aa15.48■□□□□ 0.07
NUDCD3-211ENST00000497978 GTF2E1P29083 439 aaPredicted RBP15.48■□□□□ 0.07
NUDCD3-211ENST00000497978 FSTL1Q12841 308 aa15.48■□□□□ 0.07
NUDCD3-211ENST00000497978 DDX10Q13206 875 aaKnown RBP15.48■□□□□ 0.07
NUDCD3-211ENST00000497978 PRPF40BQ6NWY9 871 aaKnown RBP15.48■□□□□ 0.07
NUDCD3-211ENST00000497978 NGEFQ8N5V2 710 aa15.48■□□□□ 0.07
NUDCD3-211ENST00000497978 PRELPP51888 382 aa15.47■□□□□ 0.07
NUDCD3-211ENST00000497978 RIPK4P57078 832 aa15.47■□□□□ 0.07
NUDCD3-211ENST00000497978 LMOD3Q0VAK6 560 aa15.47■□□□□ 0.07
NUDCD3-211ENST00000497978 DPY19L2Q6NUT2 758 aa15.47■□□□□ 0.07
NUDCD3-211ENST00000497978 KIF6Q6ZMV9 814 aa15.47■□□□□ 0.07
NUDCD3-211ENST00000497978 TAOK3Q9H2K8 898 aa15.47■□□□□ 0.07
NUDCD3-211ENST00000497978 RRP7AQ9Y3A4 280 aaKnown RBP15.47■□□□□ 0.07
NUDCD3-211ENST00000497978 LTBP3Q9NS15 1303 aa15.46■□□□□ 0.07
NUDCD3-211ENST00000497978 FAM177BA6PVY3 158 aa15.46■□□□□ 0.07
NUDCD3-211ENST00000497978 ERVV-1B6SEH8 477 aa15.46■□□□□ 0.07
NUDCD3-211ENST00000497978 VEGFAP15692 232 aaPredicted RBP15.46■□□□□ 0.07
NUDCD3-211ENST00000497978 NPR1P16066 1061 aa15.46■□□□□ 0.07
NUDCD3-211ENST00000497978 POLA2Q14181 598 aa15.46■□□□□ 0.07
NUDCD3-211ENST00000497978 HLFQ16534 295 aa15.46■□□□□ 0.07
NUDCD3-211ENST00000497978 ERFEQ4G0M1 354 aa15.46■□□□□ 0.07
NUDCD3-211ENST00000497978 TSPYL4Q9UJ04 414 aa15.46■□□□□ 0.07
NUDCD3-211ENST00000497978 FER1L6Q2WGJ9 1857 aa15.46■□□□□ 0.06
NUDCD3-211ENST00000497978 TIAM2Q8IVF5 1701 aa15.46■□□□□ 0.06
NUDCD3-211ENST00000497978 MYBBP1AQ9BQG0 1328 aaKnown RBP15.45■□□□□ 0.06
NUDCD3-211ENST00000497978 SLX4Q8IY92 1834 aa15.45■□□□□ 0.06
NUDCD3-211ENST00000497978 MYL6BP14649 208 aa15.45■□□□□ 0.06
NUDCD3-211ENST00000497978 SMC1BQ8NDV3 1235 aa15.45■□□□□ 0.06
NUDCD3-211ENST00000497978 NYXQ9GZU5 481 aa15.45■□□□□ 0.06
NUDCD3-211ENST00000497978 ERBB4Q15303 1308 aa15.44■□□□□ 0.06
NUDCD3-211ENST00000497978 MAP3K15Q6ZN16 1313 aa15.44■□□□□ 0.06
NUDCD3-211ENST00000497978 ARFGEF2Q9Y6D5 1785 aa15.44■□□□□ 0.06
NUDCD3-211ENST00000497978 CACNA1SQ13698 1873 aa15.44■□□□□ 0.06
NUDCD3-211ENST00000497978 KLRG2A4D1S0 409 aaPredicted RBP15.44■□□□□ 0.06
NUDCD3-211ENST00000497978 TMPOP42166 694 aaKnown RBP15.44■□□□□ 0.06
NUDCD3-211ENST00000497978 BABAM1Q9NWV8 329 aa15.44■□□□□ 0.06
NUDCD3-211ENST00000497978 ALDH1B1P30837 517 aa15.43■□□□□ 0.06
NUDCD3-211ENST00000497978 CCDC93Q567U6 631 aa15.43■□□□□ 0.06
NUDCD3-211ENST00000497978 DICER1Q9UPY3 1922 aaKnown RBP15.43■□□□□ 0.06
NUDCD3-211ENST00000497978 WDR43Q15061 677 aaKnown RBP eCLIP15.42■□□□□ 0.06
NUDCD3-211ENST00000497978 TTLL7Q6ZT98 887 aa15.42■□□□□ 0.06
NUDCD3-211ENST00000497978 ZBTB3Q9H5J0 574 aa15.42■□□□□ 0.06
NUDCD3-211ENST00000497978 NUP98P52948 1817 aa15.41■□□□□ 0.06
NUDCD3-211ENST00000497978 ABCB7O75027 752 aa15.41■□□□□ 0.06
NUDCD3-211ENST00000497978 EIF2S2P20042 333 aaKnown RBP15.41■□□□□ 0.06
NUDCD3-211ENST00000497978 RTKN2Q8IZC4 609 aa15.41■□□□□ 0.06
NUDCD3-211ENST00000497978 WDR90Q96KV7 1748 aa15.4■□□□□ 0.06
NUDCD3-211ENST00000497978 NEUROD2Q15784 382 aa15.4■□□□□ 0.06
NUDCD3-211ENST00000497978 CCDC146Q8IYE0 955 aa15.4■□□□□ 0.06
NUDCD3-211ENST00000497978 DNAJC5GQ8N7S2 189 aa15.4■□□□□ 0.06
NUDCD3-211ENST00000497978 C7orf43Q8WVR3 580 aa15.4■□□□□ 0.06
NUDCD3-211ENST00000497978 RUNDC1Q96C34 613 aa15.4■□□□□ 0.06
NUDCD3-211ENST00000497978 IBTKQ9P2D0 1353 aaPredicted RBP15.39■□□□□ 0.05
NUDCD3-211ENST00000497978 GPTP24298 496 aa15.39■□□□□ 0.05
NUDCD3-211ENST00000497978 FKBP4Q02790 459 aaKnown RBP eCLIP15.39■□□□□ 0.05
NUDCD3-211ENST00000497978 GIGYF2Q6Y7W6 1299 aaKnown RBP15.39■□□□□ 0.05
NUDCD3-211ENST00000497978 NUTM1Q86Y26 1132 aa15.39■□□□□ 0.05
NUDCD3-211ENST00000497978 RPGRQ92834 1020 aaKnown RBP15.39■□□□□ 0.05
NUDCD3-211ENST00000497978 CEP350Q5VT06 3117 aa15.39■□□□□ 0.05
NUDCD3-211ENST00000497978 CRY2Q49AN0 593 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms