RNA–Protein interactions for RNA: ENST00000497388.5

CPA4-211, Transcript of carboxypeptidase A4, humanhuman

TSL 4

Gene CPA4, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-211ENST00000497388 ZBTB3Q9H5J0 574 aa13.51□□□□□ -0.25
CPA4-211ENST00000497388 SALL2Q9Y467 1007 aaPredicted RBP13.51□□□□□ -0.25
CPA4-211ENST00000497388 ANKRD31Q8N7Z5 1873 aa13.5□□□□□ -0.25
CPA4-211ENST00000497388 CHL1O00533 1208 aa13.5□□□□□ -0.25
CPA4-211ENST00000497388 ZNF526Q8TF50 670 aaPredicted RBP13.5□□□□□ -0.25
CPA4-211ENST00000497388 ZNF428Q96B54 188 aa13.5□□□□□ -0.25
CPA4-211ENST00000497388 PIM2Q9P1W9 311 aa13.5□□□□□ -0.25
CPA4-211ENST00000497388 ZNF219Q9P2Y4 722 aaPredicted RBP13.5□□□□□ -0.25
CPA4-211ENST00000497388 NIP7Q9Y221 180 aaKnown RBP eCLIP13.5□□□□□ -0.25
CPA4-211ENST00000497388 GPTP24298 496 aa13.49□□□□□ -0.25
CPA4-211ENST00000497388 PDIA6Q15084 440 aa13.49□□□□□ -0.25
CPA4-211ENST00000497388 DALRD3Q5D0E6 543 aaKnown RBP13.49□□□□□ -0.25
CPA4-211ENST00000497388 KIF6Q6ZMV9 814 aa13.49□□□□□ -0.25
CPA4-211ENST00000497388 NBPF5PQ86XG9 351 aaPredicted RBP13.49□□□□□ -0.25
CPA4-211ENST00000497388 CNBD1Q8NA66 436 aa13.49□□□□□ -0.25
CPA4-211ENST00000497388 MBIPQ9NS73 344 aa13.49□□□□□ -0.25
CPA4-211ENST00000497388 COL11A2P13942 1736 aaPredicted RBP13.48□□□□□ -0.25
CPA4-211ENST00000497388 ELL2O00472 640 aaPredicted RBP13.48□□□□□ -0.25
CPA4-211ENST00000497388 AIMP1Q12904 312 aaKnown RBP13.48□□□□□ -0.25
CPA4-211ENST00000497388 ZNF622Q969S3 477 aaKnown RBP eCLIP13.48□□□□□ -0.25
CPA4-211ENST00000497388 ZNF652Q9Y2D9 606 aa13.48□□□□□ -0.25
CPA4-211ENST00000497388 MAP3K15Q6ZN16 1313 aa13.47□□□□□ -0.25
CPA4-211ENST00000497388 H0YIN7 160 aa13.47□□□□□ -0.25
CPA4-211ENST00000497388 FAM9BQ8IZU0 186 aa13.47□□□□□ -0.25
CPA4-211ENST00000497388 ATP10DQ9P241 1426 aa13.47□□□□□ -0.25
CPA4-211ENST00000497388 ST5P78524 1137 aa13.46□□□□□ -0.25
CPA4-211ENST00000497388 RASSF7Q02833 373 aa13.46□□□□□ -0.25
CPA4-211ENST00000497388 NUTM1Q86Y26 1132 aa13.46□□□□□ -0.25
CPA4-211ENST00000497388 XAGE3Q8WTP9 111 aa13.46□□□□□ -0.25
CPA4-211ENST00000497388 CFAP44Q96MT7 982 aa13.46□□□□□ -0.25
CPA4-211ENST00000497388 BABAM1Q9NWV8 329 aa13.46□□□□□ -0.25
CPA4-211ENST00000497388 CHPF2Q9P2E5 772 aa13.46□□□□□ -0.25
CPA4-211ENST00000497388 NUP98P52948 1817 aa13.46□□□□□ -0.26
CPA4-211ENST00000497388 CACNA1SQ13698 1873 aa13.45□□□□□ -0.26
CPA4-211ENST00000497388 HDGFL1Q5TGJ6 251 aa13.45□□□□□ -0.26
CPA4-211ENST00000497388 DUSP27Q5VZP5 1158 aa13.45□□□□□ -0.26
CPA4-211ENST00000497388 CLEC4GQ6UXB4 293 aa13.45□□□□□ -0.26
CPA4-211ENST00000497388 LRP10Q7Z4F1 713 aa13.45□□□□□ -0.26
CPA4-211ENST00000497388 TSR2Q969E8 191 aaKnown RBP13.45□□□□□ -0.26
CPA4-211ENST00000497388 BRIP1Q9BX63 1249 aa13.45□□□□□ -0.26
CPA4-211ENST00000497388 ARFGEF1Q9Y6D6 1849 aa13.45□□□□□ -0.26
CPA4-211ENST00000497388 DLEC1Q9Y238 1755 aa13.45□□□□□ -0.26
CPA4-211ENST00000497388 ZNF853P0CG23 659 aa13.44□□□□□ -0.26
CPA4-211ENST00000497388 COPS6Q7L5N1 327 aa13.44□□□□□ -0.26
CPA4-211ENST00000497388 C8orf58Q8NAV2 365 aa13.44□□□□□ -0.26
CPA4-211ENST00000497388 IFT57Q9NWB7 429 aa13.44□□□□□ -0.26
CPA4-211ENST00000497388 ABCC12Q96J65 1359 aa13.44□□□□□ -0.26
CPA4-211ENST00000497388 UBN2Q6ZU65 1347 aa13.43□□□□□ -0.26
CPA4-211ENST00000497388 TCERG1O14776 1098 aaKnown RBP13.43□□□□□ -0.26
CPA4-211ENST00000497388 GTF2E1P29083 439 aaPredicted RBP13.43□□□□□ -0.26
CPA4-211ENST00000497388 PDE6BP35913 854 aa13.43□□□□□ -0.26
CPA4-211ENST00000497388 GNAI1P63096 354 aa13.43□□□□□ -0.26
CPA4-211ENST00000497388 ERFEQ4G0M1 354 aa13.43□□□□□ -0.26
CPA4-211ENST00000497388 TTLL6Q8N841 843 aa13.43□□□□□ -0.26
CPA4-211ENST00000497388 TNRC6CQ9HCJ0 1690 aaKnown RBP13.43□□□□□ -0.26
CPA4-211ENST00000497388 ERBB4Q15303 1308 aa13.42□□□□□ -0.26
CPA4-211ENST00000497388 ERVV-1B6SEH8 477 aa13.42□□□□□ -0.26
CPA4-211ENST00000497388 C21orf2O43822 256 aa13.42□□□□□ -0.26
CPA4-211ENST00000497388 SUSD4Q5VX71 490 aa13.42□□□□□ -0.26
CPA4-211ENST00000497388 C9orf131Q5VYM1 1079 aa13.42□□□□□ -0.26
CPA4-211ENST00000497388 TPTE2Q6XPS3 522 aa13.42□□□□□ -0.26
CPA4-211ENST00000497388 WWC1Q8IX03 1113 aa13.42□□□□□ -0.26
CPA4-211ENST00000497388 ADCY9O60503 1353 aa13.42□□□□□ -0.26
CPA4-211ENST00000497388 CALD1Q05682 793 aaKnown RBP13.41□□□□□ -0.26
CPA4-211ENST00000497388 OLFM4Q6UX06 510 aa13.41□□□□□ -0.26
CPA4-211ENST00000497388 SLC51AQ86UW1 340 aa13.41□□□□□ -0.26
CPA4-211ENST00000497388 TSPYL6Q8N831 410 aa13.41□□□□□ -0.26
CPA4-211ENST00000497388 DDX21Q9NR30 783 aaKnown RBP eCLIP13.41□□□□□ -0.26
CPA4-211ENST00000497388 RNF181Q9P0P0 153 aa13.41□□□□□ -0.26
CPA4-211ENST00000497388 SLX4Q8IY92 1834 aa13.41□□□□□ -0.26
CPA4-211ENST00000497388 SRGNP10124 158 aa13.4□□□□□ -0.26
CPA4-211ENST00000497388 PRELPP51888 382 aa13.4□□□□□ -0.26
CPA4-211ENST00000497388 GIGYF2Q6Y7W6 1299 aaKnown RBP13.4□□□□□ -0.26
CPA4-211ENST00000497388 C3orf67Q6ZVT6 689 aa13.4□□□□□ -0.26
CPA4-211ENST00000497388 ZNF34Q8IZ26 560 aa13.4□□□□□ -0.26
CPA4-211ENST00000497388 PRPF40BQ6NWY9 871 aaKnown RBP13.39□□□□□ -0.27
CPA4-211ENST00000497388 SYNE4Q8N205 404 aa13.39□□□□□ -0.27
CPA4-211ENST00000497388 GPBP1L1Q9HC44 474 aaPredicted RBP13.39□□□□□ -0.27
CPA4-211ENST00000497388 ATP5J2-PTCD1G3V325 749 aa13.38□□□□□ -0.27
CPA4-211ENST00000497388 NFKBIEO00221 500 aa13.38□□□□□ -0.27
CPA4-211ENST00000497388 NTSR2O95665 410 aa13.38□□□□□ -0.27
CPA4-211ENST00000497388 STYK1Q6J9G0 422 aa13.38□□□□□ -0.27
CPA4-211ENST00000497388 MASTLQ96GX5 879 aa13.38□□□□□ -0.27
CPA4-211ENST00000497388 PHAXQ9H814 394 aaKnown RBP13.38□□□□□ -0.27
CPA4-211ENST00000497388 DBF4Q9UBU7 674 aaPredicted RBP13.38□□□□□ -0.27
CPA4-211ENST00000497388 SBF1O95248 1867 aa13.38□□□□□ -0.27
CPA4-211ENST00000497388 RGL2O15211 777 aa13.37□□□□□ -0.27
CPA4-211ENST00000497388 HOXB7P09629 217 aa13.37□□□□□ -0.27
CPA4-211ENST00000497388 RTL5Q5HYW3 569 aaPredicted RBP13.37□□□□□ -0.27
CPA4-211ENST00000497388 CNKSR1Q969H4 720 aa13.37□□□□□ -0.27
CPA4-211ENST00000497388 NYXQ9GZU5 481 aa13.37□□□□□ -0.27
CPA4-211ENST00000497388 ANKRD36CQ5JPF3 1778 aa13.37□□□□□ -0.27
CPA4-211ENST00000497388 CCDC88AQ3V6T2 1871 aa13.36□□□□□ -0.27
CPA4-211ENST00000497388 HCLS1P14317 486 aaPredicted RBP13.36□□□□□ -0.27
CPA4-211ENST00000497388 NPR1P16066 1061 aa13.36□□□□□ -0.27
CPA4-211ENST00000497388 CCDC27Q2M243 656 aa13.36□□□□□ -0.27
CPA4-211ENST00000497388 NLRP10Q86W26 655 aa13.36□□□□□ -0.27
CPA4-211ENST00000497388 UTP14AQ9BVJ6 771 aaKnown RBP13.36□□□□□ -0.27
CPA4-211ENST00000497388 SPINK5Q9NQ38 1064 aaPredicted RBP13.36□□□□□ -0.27
CPA4-211ENST00000497388 FANCIQ9NVI1 1328 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms