RNA–Protein interactions for RNA: ENST00000497049.5

SIK3-213, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-213ENST00000497049 LIMD1Q9UGP4 676 aa8.5□□□□□ -1.05
SIK3-213ENST00000497049 PARD3Q8TEW0 1356 aa8.49□□□□□ -1.05
SIK3-213ENST00000497049 RGPD8O14715 1765 aaPredicted RBP8.49□□□□□ -1.05
SIK3-213ENST00000497049 RNF223E7ERA6 249 aa8.49□□□□□ -1.05
SIK3-213ENST00000497049 LILRB3O75022 631 aa8.49□□□□□ -1.05
SIK3-213ENST00000497049 PPP2R1AP30153 589 aa8.49□□□□□ -1.05
SIK3-213ENST00000497049 HELBQ8NG08 1087 aaPredicted RBP8.49□□□□□ -1.05
SIK3-213ENST00000497049 BCL11AQ9H165 835 aa8.49□□□□□ -1.05
SIK3-213ENST00000497049 MYOM1P52179 1685 aa8.49□□□□□ -1.05
SIK3-213ENST00000497049 TOPAZ1Q8N9V7 1692 aa8.49□□□□□ -1.05
SIK3-213ENST00000497049 MYBBP1AQ9BQG0 1328 aaKnown RBP8.49□□□□□ -1.05
SIK3-213ENST00000497049 AATKQ6ZMQ8 1374 aa8.48□□□□□ -1.05
SIK3-213ENST00000497049 GCP02774 474 aa8.48□□□□□ -1.05
SIK3-213ENST00000497049 PRR7Q8TB68 274 aa8.48□□□□□ -1.05
SIK3-213ENST00000497049 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.48□□□□□ -1.05
SIK3-213ENST00000497049 POLKQ9UBT6 870 aa8.48□□□□□ -1.05
SIK3-213ENST00000497049 PCDHB15Q9Y5E8 787 aa8.48□□□□□ -1.05
SIK3-213ENST00000497049 V9GY48 417 aaPredicted RBP8.48□□□□□ -1.05
SIK3-213ENST00000497049 ITSN1Q15811 1721 aa8.48□□□□□ -1.05
SIK3-213ENST00000497049 ARHGEF10O15013 1369 aa8.48□□□□□ -1.05
SIK3-213ENST00000497049 MTHFSP49914 203 aa8.47□□□□□ -1.05
SIK3-213ENST00000497049 CNGB1Q14028 1251 aaPredicted RBP8.47□□□□□ -1.05
SIK3-213ENST00000497049 PTPRNQ16849 979 aa8.47□□□□□ -1.05
SIK3-213ENST00000497049 CSPP1Q1MSJ5 1256 aa8.47□□□□□ -1.05
SIK3-213ENST00000497049 NUTM2GQ5VZR2 741 aa8.47□□□□□ -1.05
SIK3-213ENST00000497049 PPP2R2DQ66LE6 453 aa8.47□□□□□ -1.05
SIK3-213ENST00000497049 KIF1AQ12756 1690 aa8.46□□□□□ -1.05
SIK3-213ENST00000497049 PXDNQ92626 1479 aa8.46□□□□□ -1.05
SIK3-213ENST00000497049 TNNT2P45379 298 aaPredicted RBP8.46□□□□□ -1.06
SIK3-213ENST00000497049 ARHGEF25Q86VW2 580 aa8.46□□□□□ -1.06
SIK3-213ENST00000497049 FBXO41Q8TF61 875 aa8.46□□□□□ -1.06
SIK3-213ENST00000497049 SYMPKQ92797 1274 aaKnown RBP8.46□□□□□ -1.06
SIK3-213ENST00000497049 USP19O94966 1318 aa8.46□□□□□ -1.06
SIK3-213ENST00000497049 INSRP06213 1382 aa8.46□□□□□ -1.06
SIK3-213ENST00000497049 AKAP12Q02952 1782 aa8.45□□□□□ -1.06
SIK3-213ENST00000497049 FBLN1P23142 703 aa8.45□□□□□ -1.06
SIK3-213ENST00000497049 QPCTQ16769 361 aa8.45□□□□□ -1.06
SIK3-213ENST00000497049 FCF1Q9Y324 198 aaKnown RBP8.45□□□□□ -1.06
SIK3-213ENST00000497049 SUPT16HQ9Y5B9 1047 aaKnown RBP8.45□□□□□ -1.06
SIK3-213ENST00000497049 OVOS2A0A0J9YW53 1432 aa8.45□□□□□ -1.06
SIK3-213ENST00000497049 OVOS2Q6IE36 1432 aa8.45□□□□□ -1.06
SIK3-213ENST00000497049 ZBTB24O43167 697 aaPredicted RBP8.44□□□□□ -1.06
SIK3-213ENST00000497049 CCNYL3P0C7X3 344 aa8.44□□□□□ -1.06
SIK3-213ENST00000497049 RPIAP49247 311 aa8.44□□□□□ -1.06
SIK3-213ENST00000497049 CABLES1Q8TDN4 633 aa8.44□□□□□ -1.06
SIK3-213ENST00000497049 PNISRQ8TF01 805 aaKnown RBP8.44□□□□□ -1.06
SIK3-213ENST00000497049 IP6K1Q92551 441 aa8.44□□□□□ -1.06
SIK3-213ENST00000497049 CFAP53Q96M91 514 aa8.44□□□□□ -1.06
SIK3-213ENST00000497049 NUDT12Q9BQG2 462 aa8.44□□□□□ -1.06
SIK3-213ENST00000497049 PRDM9Q9NQV7 894 aa8.44□□□□□ -1.06
SIK3-213ENST00000497049 KIF24Q5T7B8 1368 aa8.44□□□□□ -1.06
SIK3-213ENST00000497049 PNPLA6Q8IY17 1366 aa8.44□□□□□ -1.06
SIK3-213ENST00000497049 TNS3Q68CZ2 1445 aa8.44□□□□□ -1.06
SIK3-213ENST00000497049 MON2Q7Z3U7 1717 aa8.43□□□□□ -1.06
SIK3-213ENST00000497049 AMPHP49418 695 aa8.43□□□□□ -1.06
SIK3-213ENST00000497049 RRS1Q15050 365 aaKnown RBP8.43□□□□□ -1.06
SIK3-213ENST00000497049 CCDC184Q52MB2 194 aa8.43□□□□□ -1.06
SIK3-213ENST00000497049 MAP3K19Q56UN5 1328 aa8.43□□□□□ -1.06
SIK3-213ENST00000497049 AHDC1Q5TGY3 1603 aaPredicted RBP8.43□□□□□ -1.06
SIK3-213ENST00000497049 CFAP99D6REC4 459 aa8.42□□□□□ -1.06
SIK3-213ENST00000497049 HSPA1LP34931 641 aa8.42□□□□□ -1.06
SIK3-213ENST00000497049 TMEM259Q4ZIN3 620 aa8.42□□□□□ -1.06
SIK3-213ENST00000497049 LYPD8Q6UX82 237 aa8.42□□□□□ -1.06
SIK3-213ENST00000497049 MRS2Q9HD23 443 aa8.42□□□□□ -1.06
SIK3-213ENST00000497049 NUDCQ9Y266 331 aa8.42□□□□□ -1.06
SIK3-213ENST00000497049 EMILIN1Q9Y6C2 1016 aa8.42□□□□□ -1.06
SIK3-213ENST00000497049 ROBO1Q9Y6N7 1651 aa8.41□□□□□ -1.06
SIK3-213ENST00000497049 CPDO75976 1380 aa8.41□□□□□ -1.06
SIK3-213ENST00000497049 FAM83GA6ND36 823 aa8.41□□□□□ -1.06
SIK3-213ENST00000497049 PPM1GO15355 546 aaPredicted RBP8.41□□□□□ -1.06
SIK3-213ENST00000497049 DIAPH1O60610 1272 aaKnown RBP8.41□□□□□ -1.06
SIK3-213ENST00000497049 CD2BP2O95400 341 aaKnown RBP8.41□□□□□ -1.06
SIK3-213ENST00000497049 HOXC9P31274 260 aa8.41□□□□□ -1.06
SIK3-213ENST00000497049 IL13P35225 146 aa8.41□□□□□ -1.06
SIK3-213ENST00000497049 SLC19A1P41440 591 aa8.41□□□□□ -1.06
SIK3-213ENST00000497049 ZC3H6P61129 1189 aaKnown RBP8.41□□□□□ -1.06
SIK3-213ENST00000497049 TMEM132AQ24JP5 1023 aa8.41□□□□□ -1.06
SIK3-213ENST00000497049 PROCA1Q8NCQ7 364 aaPredicted RBP8.41□□□□□ -1.06
SIK3-213ENST00000497049 TRPM3Q9HCF6 1732 aaPredicted RBP8.4□□□□□ -1.06
SIK3-213ENST00000497049 NRKQ7Z2Y5 1582 aa8.4□□□□□ -1.06
SIK3-213ENST00000497049 JCADQ9P266 1359 aa8.4□□□□□ -1.06
SIK3-213ENST00000497049 SPATA31A6Q5VVP1 1343 aa8.4□□□□□ -1.06
SIK3-213ENST00000497049 HSP90AB2PQ58FF8 381 aa8.4□□□□□ -1.06
SIK3-213ENST00000497049 TSC1Q92574 1164 aa8.4□□□□□ -1.06
SIK3-213ENST00000497049 PRKD2Q9BZL6 878 aa8.4□□□□□ -1.06
SIK3-213ENST00000497049 NHSL1Q5SYE7 1610 aa8.4□□□□□ -1.07
SIK3-213ENST00000497049 PPEF1O14829 653 aaPredicted RBP8.39□□□□□ -1.07
SIK3-213ENST00000497049 RTL5Q5HYW3 569 aaPredicted RBP8.39□□□□□ -1.07
SIK3-213ENST00000497049 CCDC24Q8N4L8 307 aa8.39□□□□□ -1.07
SIK3-213ENST00000497049 PNNQ9H307 717 aaKnown RBP8.39□□□□□ -1.07
SIK3-213ENST00000497049 EVA1BQ9NVM1 165 aa8.39□□□□□ -1.07
SIK3-213ENST00000497049 ADAMTS8Q9UP79 889 aa8.39□□□□□ -1.07
SIK3-213ENST00000497049 ALS2Q96Q42 1657 aa8.39□□□□□ -1.07
SIK3-213ENST00000497049 SLIT3O75094 1523 aa8.39□□□□□ -1.07
SIK3-213ENST00000497049 FLT4P35916 1363 aa8.38□□□□□ -1.07
SIK3-213ENST00000497049 PIK3C2AO00443 1686 aa8.38□□□□□ -1.07
SIK3-213ENST00000497049 APBB1O00213 710 aa8.38□□□□□ -1.07
SIK3-213ENST00000497049 RFC5P40937 340 aa8.38□□□□□ -1.07
SIK3-213ENST00000497049 EIF4A2Q14240 407 aaKnown RBP8.38□□□□□ -1.07
SIK3-213ENST00000497049 PNMA1Q8ND90 353 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms