RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 PHACTR1Q9C0D0 580 aa12.29□□□□□ -0.44
TARDBP-210ENST00000496840 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.28□□□□□ -0.44
TARDBP-210ENST00000496840 ATG7O95352 703 aa12.28□□□□□ -0.44
TARDBP-210ENST00000496840 FAM182BQ5T319 152 aa12.28□□□□□ -0.44
TARDBP-210ENST00000496840 ACDQ96AP0 544 aa12.28□□□□□ -0.44
TARDBP-210ENST00000496840 HCN4Q9Y3Q4 1203 aa12.28□□□□□ -0.44
TARDBP-210ENST00000496840 MAPTP10636 758 aaKnown RBP12.27□□□□□ -0.45
TARDBP-210ENST00000496840 WEE1P30291 646 aa12.27□□□□□ -0.45
TARDBP-210ENST00000496840 MAP3K10Q02779 954 aa12.27□□□□□ -0.45
TARDBP-210ENST00000496840 PBXIP1Q96AQ6 731 aa12.27□□□□□ -0.45
TARDBP-210ENST00000496840 EFSO43281 561 aa12.26□□□□□ -0.45
TARDBP-210ENST00000496840 BCRP11274 1271 aa12.26□□□□□ -0.45
TARDBP-210ENST00000496840 BMP4P12644 408 aa12.26□□□□□ -0.45
TARDBP-210ENST00000496840 LAMC2Q13753 1193 aa12.26□□□□□ -0.45
TARDBP-210ENST00000496840 SWI5Q1ZZU3 235 aa12.26□□□□□ -0.45
TARDBP-210ENST00000496840 ERICH6Q7L0X2 663 aa12.26□□□□□ -0.45
TARDBP-210ENST00000496840 ALDH16A1Q8IZ83 802 aa12.26□□□□□ -0.45
TARDBP-210ENST00000496840 KLRG1Q96E93 195 aa12.26□□□□□ -0.45
TARDBP-210ENST00000496840 OXCT2Q9BYC2 517 aaPredicted RBP12.26□□□□□ -0.45
TARDBP-210ENST00000496840 NEUROD4Q9HD90 331 aa12.26□□□□□ -0.45
TARDBP-210ENST00000496840 ZMIZ1Q9ULJ6 1067 aa12.26□□□□□ -0.45
TARDBP-210ENST00000496840 ADAMTS8Q9UP79 889 aa12.26□□□□□ -0.45
TARDBP-210ENST00000496840 DCDC2BA2VCK2 349 aa12.25□□□□□ -0.45
TARDBP-210ENST00000496840 C2CD2LO14523 706 aa12.25□□□□□ -0.45
TARDBP-210ENST00000496840 KHNYNO15037 678 aaKnown RBP12.25□□□□□ -0.45
TARDBP-210ENST00000496840 CTBSQ01459 385 aa12.25□□□□□ -0.45
TARDBP-210ENST00000496840 LRRC69Q6ZNQ3 347 aa12.25□□□□□ -0.45
TARDBP-210ENST00000496840 CHMP7Q8WUX9 453 aaPredicted RBP12.25□□□□□ -0.45
TARDBP-210ENST00000496840 ANKIB1Q9P2G1 1089 aa12.25□□□□□ -0.45
TARDBP-210ENST00000496840 ACIN1Q9UKV3 1341 aaKnown RBP12.25□□□□□ -0.45
TARDBP-210ENST00000496840 FOXO3O43524 673 aa12.24□□□□□ -0.45
TARDBP-210ENST00000496840 ENAMQ9NRM1 1142 aa12.24□□□□□ -0.45
TARDBP-210ENST00000496840 GDF2Q9UK05 429 aaPredicted RBP12.24□□□□□ -0.45
TARDBP-210ENST00000496840 HCN2Q9UL51 889 aa12.24□□□□□ -0.45
TARDBP-210ENST00000496840 HIF1AQ16665 826 aa12.23□□□□□ -0.45
TARDBP-210ENST00000496840 OIP5O43482 229 aa12.22□□□□□ -0.45
TARDBP-210ENST00000496840 LGR5O75473 907 aa12.22□□□□□ -0.45
TARDBP-210ENST00000496840 CCDC82Q8N4S0 544 aa12.22□□□□□ -0.45
TARDBP-210ENST00000496840 GOLGA6L1Q8N7Z2 621 aa12.22□□□□□ -0.45
TARDBP-210ENST00000496840 RTN1Q16799 776 aa12.21□□□□□ -0.45
TARDBP-210ENST00000496840 AVENQ9NQS1 362 aaPredicted RBP12.21□□□□□ -0.45
TARDBP-210ENST00000496840 MARK1Q9P0L2 795 aa12.21□□□□□ -0.45
TARDBP-210ENST00000496840 ARAFP10398 606 aa12.2□□□□□ -0.46
TARDBP-210ENST00000496840 CD33P20138 364 aa12.2□□□□□ -0.46
TARDBP-210ENST00000496840 FAM69CQ0P6D2 419 aa12.2□□□□□ -0.46
TARDBP-210ENST00000496840 STK32AQ8WU08 396 aa12.2□□□□□ -0.46
TARDBP-210ENST00000496840 SUSD3Q96L08 255 aa12.2□□□□□ -0.46
TARDBP-210ENST00000496840 C1orf115Q9H7X2 142 aa12.2□□□□□ -0.46
TARDBP-210ENST00000496840 HSH2DQ96JZ2 352 aa12.19□□□□□ -0.46
TARDBP-210ENST00000496840 SLCO4C1Q6ZQN7 724 aa12.18□□□□□ -0.46
TARDBP-210ENST00000496840 NGLY1Q96IV0 654 aa12.18□□□□□ -0.46
TARDBP-210ENST00000496840 STRN4Q9NRL3 753 aa12.18□□□□□ -0.46
TARDBP-210ENST00000496840 IER5Q5VY09 327 aa12.17□□□□□ -0.46
TARDBP-210ENST00000496840 ZNF280CQ8ND82 737 aa12.17□□□□□ -0.46
TARDBP-210ENST00000496840 KCNQ4P56696 695 aa12.16□□□□□ -0.46
TARDBP-210ENST00000496840 TYRO3Q06418 890 aa12.16□□□□□ -0.46
TARDBP-210ENST00000496840 GGA1Q9UJY5 639 aa12.16□□□□□ -0.46
TARDBP-210ENST00000496840 RNF225M0QZC1 329 aaPredicted RBP12.15□□□□□ -0.46
TARDBP-210ENST00000496840 MARSP56192 900 aaKnown RBP12.15□□□□□ -0.46
TARDBP-210ENST00000496840 OCLNQ16625 522 aa12.15□□□□□ -0.46
TARDBP-210ENST00000496840 TMEM164Q5U3C3 297 aa12.15□□□□□ -0.46
TARDBP-210ENST00000496840 ZNF468Q5VIY5 522 aaPredicted RBP12.15□□□□□ -0.46
TARDBP-210ENST00000496840 C1orf229Q6ZS94 237 aaPredicted RBP12.15□□□□□ -0.46
TARDBP-210ENST00000496840 VTI1AQ96AJ9 217 aa12.15□□□□□ -0.46
TARDBP-210ENST00000496840 MYO19Q96H55 970 aa12.15□□□□□ -0.46
TARDBP-210ENST00000496840 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.15□□□□□ -0.46
TARDBP-210ENST00000496840 ADH6P28332 368 aa12.14□□□□□ -0.47
TARDBP-210ENST00000496840 KCNMA1Q12791 1236 aa12.14□□□□□ -0.47
TARDBP-210ENST00000496840 GALNT6Q8NCL4 622 aa12.14□□□□□ -0.47
TARDBP-210ENST00000496840 NEDD1Q8NHV4 660 aa12.14□□□□□ -0.47
TARDBP-210ENST00000496840 CEP63Q96MT8 703 aa12.14□□□□□ -0.47
TARDBP-210ENST00000496840 BRD7Q9NPI1 651 aa12.14□□□□□ -0.47
TARDBP-210ENST00000496840 TGFBR3LH3BV60 316 aa12.13□□□□□ -0.47
TARDBP-210ENST00000496840 PPP1R15AO75807 674 aaPredicted RBP12.13□□□□□ -0.47
TARDBP-210ENST00000496840 SFSWAPQ12872 951 aaKnown RBP12.13□□□□□ -0.47
TARDBP-210ENST00000496840 BTLAQ7Z6A9 289 aa12.13□□□□□ -0.47
TARDBP-210ENST00000496840 EDARADDQ8WWZ3 215 aa12.13□□□□□ -0.47
TARDBP-210ENST00000496840 CLP1Q92989 425 aaKnown RBP12.13□□□□□ -0.47
TARDBP-210ENST00000496840 SCARF2Q96GP6 870 aaPredicted RBP12.13□□□□□ -0.47
TARDBP-210ENST00000496840 QTRT2Q9H974 415 aaKnown RBP12.13□□□□□ -0.47
TARDBP-210ENST00000496840 DNMT3AQ9Y6K1 912 aaPredicted RBP12.13□□□□□ -0.47
TARDBP-210ENST00000496840 SHISA8B8ZZ34 492 aa12.12□□□□□ -0.47
TARDBP-210ENST00000496840 FKBP5Q13451 457 aaPredicted RBP12.12□□□□□ -0.47
TARDBP-210ENST00000496840 PRIMPOLQ96LW4 560 aa12.12□□□□□ -0.47
TARDBP-210ENST00000496840 PRR12Q9ULL5 1215 aa12.12□□□□□ -0.47
TARDBP-210ENST00000496840 PRMT3O60678 531 aa12.11□□□□□ -0.47
TARDBP-210ENST00000496840 EPXP11678 715 aa12.11□□□□□ -0.47
TARDBP-210ENST00000496840 KLF15Q9UIH9 416 aa12.11□□□□□ -0.47
TARDBP-210ENST00000496840 KCNH4Q9UQ05 1017 aa12.11□□□□□ -0.47
TARDBP-210ENST00000496840 BCS1LQ9Y276 419 aa12.11□□□□□ -0.47
TARDBP-210ENST00000496840 NEURL1BA8MQ27 555 aa12.1□□□□□ -0.47
TARDBP-210ENST00000496840 COL26A1Q96A83 441 aa12.1□□□□□ -0.47
TARDBP-210ENST00000496840 CXXC1Q9P0U4 656 aaPredicted RBP12.1□□□□□ -0.47
TARDBP-210ENST00000496840 DMGDHQ9UI17 866 aaKnown RBP12.1□□□□□ -0.47
TARDBP-210ENST00000496840 GSK3AP49840 483 aa12.08□□□□□ -0.48
TARDBP-210ENST00000496840 FCHSD1Q86WN1 690 aa12.08□□□□□ -0.48
TARDBP-210ENST00000496840 PCBP4P57723 403 aaKnown RBP12.07□□□□□ -0.48
TARDBP-210ENST00000496840 SPEM2Q0P670 501 aa12.07□□□□□ -0.48
TARDBP-210ENST00000496840 DGKZQ13574 1117 aa12.07□□□□□ -0.48
TARDBP-210ENST00000496840 GRIN2CQ14957 1233 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms