RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 FHDC1Q9C0D6 1143 aaPredicted RBP8.08□□□□□ -1.12
CACNA1C-229ENST00000496818 LIMD1Q9UGP4 676 aa8.08□□□□□ -1.12
CACNA1C-229ENST00000496818 COL18A1P39060 1754 aa8.07□□□□□ -1.12
CACNA1C-229ENST00000496818 MOXD2PA6NHM9 499 aa8.07□□□□□ -1.12
CACNA1C-229ENST00000496818 NEUROD1Q13562 356 aa8.07□□□□□ -1.12
CACNA1C-229ENST00000496818 SAMD7Q7Z3H4 446 aa8.07□□□□□ -1.12
CACNA1C-229ENST00000496818 NME9Q86XW9 330 aa8.07□□□□□ -1.12
CACNA1C-229ENST00000496818 TMC1Q8TDI8 760 aa8.07□□□□□ -1.12
CACNA1C-229ENST00000496818 ANKRD24Q8TF21 1146 aa8.07□□□□□ -1.12
CACNA1C-229ENST00000496818 ACSBG1Q96GR2 724 aa8.07□□□□□ -1.12
CACNA1C-229ENST00000496818 CARD11Q9BXL7 1154 aa8.07□□□□□ -1.12
CACNA1C-229ENST00000496818 TERF2IPQ9NYB0 399 aa8.07□□□□□ -1.12
CACNA1C-229ENST00000496818 TONSLQ96HA7 1378 aa8.07□□□□□ -1.12
CACNA1C-229ENST00000496818 MAP3K5Q99683 1374 aa8.07□□□□□ -1.12
CACNA1C-229ENST00000496818 PAPPAQ13219 1627 aa8.07□□□□□ -1.12
CACNA1C-229ENST00000496818 MON2Q7Z3U7 1717 aa8.06□□□□□ -1.12
CACNA1C-229ENST00000496818 USP54Q70EL1 1684 aa8.06□□□□□ -1.12
CACNA1C-229ENST00000496818 SLC10A3P09131 477 aa8.06□□□□□ -1.12
CACNA1C-229ENST00000496818 POLD1P28340 1107 aa8.06□□□□□ -1.12
CACNA1C-229ENST00000496818 ANKRD13DQ6ZTN6 518 aa8.06□□□□□ -1.12
CACNA1C-229ENST00000496818 PDGFDQ9GZP0 370 aaPredicted RBP8.06□□□□□ -1.12
CACNA1C-229ENST00000496818 A0A1W2PP64 1363 aa8.06□□□□□ -1.12
CACNA1C-229ENST00000496818 SMG6Q86US8 1419 aaKnown RBP8.05□□□□□ -1.12
CACNA1C-229ENST00000496818 DIXDC1Q155Q3 683 aa8.05□□□□□ -1.12
CACNA1C-229ENST00000496818 ARXQ96QS3 562 aa8.05□□□□□ -1.12
CACNA1C-229ENST00000496818 SIN3AQ96ST3 1273 aa8.05□□□□□ -1.12
CACNA1C-229ENST00000496818 SYT17Q9BSW7 474 aa8.05□□□□□ -1.12
CACNA1C-229ENST00000496818 NBPF3Q9H094 633 aa8.05□□□□□ -1.12
CACNA1C-229ENST00000496818 CD163L1Q9NR16 1453 aa8.05□□□□□ -1.12
CACNA1C-229ENST00000496818 BHMG1C9JSJ3 638 aaPredicted RBP8.04□□□□□ -1.12
CACNA1C-229ENST00000496818 KDM4AO75164 1064 aa8.04□□□□□ -1.12
CACNA1C-229ENST00000496818 GCGRP47871 477 aa8.04□□□□□ -1.12
CACNA1C-229ENST00000496818 LSM11P83369 360 aaKnown RBP eCLIP8.04□□□□□ -1.12
CACNA1C-229ENST00000496818 SLC27A3Q5K4L6 730 aa8.04□□□□□ -1.12
CACNA1C-229ENST00000496818 MRPL50Q8N5N7 158 aaKnown RBP8.04□□□□□ -1.12
CACNA1C-229ENST00000496818 ZNF784Q8NCA9 323 aaPredicted RBP8.04□□□□□ -1.12
CACNA1C-229ENST00000496818 SYTL4Q96C24 671 aaPredicted RBP8.04□□□□□ -1.12
CACNA1C-229ENST00000496818 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.04□□□□□ -1.12
CACNA1C-229ENST00000496818 RTL1A6NKG5 1358 aa8.04□□□□□ -1.12
CACNA1C-229ENST00000496818 FAM208AQ9UK61 1670 aaKnown RBP8.03□□□□□ -1.12
CACNA1C-229ENST00000496818 ANKRD36BQ8N2N9 1353 aa8.03□□□□□ -1.12
CACNA1C-229ENST00000496818 ZNF827Q17R98 1081 aa8.03□□□□□ -1.12
CACNA1C-229ENST00000496818 ADGRD1Q6QNK2 874 aa8.03□□□□□ -1.12
CACNA1C-229ENST00000496818 SLC16A10Q8TF71 515 aa8.03□□□□□ -1.12
CACNA1C-229ENST00000496818 HLA-CQ95604 372 aa8.03□□□□□ -1.12
CACNA1C-229ENST00000496818 COG3Q96JB2 828 aa8.03□□□□□ -1.12
CACNA1C-229ENST00000496818 ZFRQ96KR1 1074 aaKnown RBP8.03□□□□□ -1.12
CACNA1C-229ENST00000496818 ZMYND15Q9H091 742 aa8.03□□□□□ -1.12
CACNA1C-229ENST00000496818 PCDHB15Q9Y5E8 787 aa8.03□□□□□ -1.12
CACNA1C-229ENST00000496818 SBF2Q86WG5 1849 aa8.03□□□□□ -1.12
CACNA1C-229ENST00000496818 SENP3-EIF4A1A0A087X0R7 540 aa8.02□□□□□ -1.13
CACNA1C-229ENST00000496818 GUCA2AQ02747 115 aa8.02□□□□□ -1.13
CACNA1C-229ENST00000496818 GPR162Q16538 588 aa8.02□□□□□ -1.13
CACNA1C-229ENST00000496818 RSBN1LQ6PCB5 846 aaPredicted RBP8.02□□□□□ -1.13
CACNA1C-229ENST00000496818 DDX54Q8TDD1 881 aaKnown RBP8.02□□□□□ -1.13
CACNA1C-229ENST00000496818 LTV1Q96GA3 475 aaPredicted RBP8.02□□□□□ -1.13
CACNA1C-229ENST00000496818 PUS7Q96PZ0 661 aaKnown RBP8.02□□□□□ -1.13
CACNA1C-229ENST00000496818 TFCP2L1Q9NZI6 479 aa8.02□□□□□ -1.13
CACNA1C-229ENST00000496818 USP47Q96K76 1375 aa8.01□□□□□ -1.13
CACNA1C-229ENST00000496818 TK2O00142 265 aa8.01□□□□□ -1.13
CACNA1C-229ENST00000496818 SPTLC1O15269 473 aa8.01□□□□□ -1.13
CACNA1C-229ENST00000496818 GIGYF1O75420 1035 aaPredicted RBP8.01□□□□□ -1.13
CACNA1C-229ENST00000496818 HMGB2P26583 209 aaKnown RBP8.01□□□□□ -1.13
CACNA1C-229ENST00000496818 RFC5P40937 340 aa8.01□□□□□ -1.13
CACNA1C-229ENST00000496818 SLC4A3P48751 1232 aa8.01□□□□□ -1.13
CACNA1C-229ENST00000496818 AMPHP49418 695 aa8.01□□□□□ -1.13
CACNA1C-229ENST00000496818 FLIIQ13045 1269 aa8.01□□□□□ -1.13
CACNA1C-229ENST00000496818 QPCTQ16769 361 aa8.01□□□□□ -1.13
CACNA1C-229ENST00000496818 SLF2Q8IX21 1173 aa8.01□□□□□ -1.13
CACNA1C-229ENST00000496818 CCER1Q8TC90 406 aaPredicted RBP8.01□□□□□ -1.13
CACNA1C-229ENST00000496818 IP6K1Q92551 441 aa8.01□□□□□ -1.13
CACNA1C-229ENST00000496818 SLC12A5Q9H2X9 1139 aa8.01□□□□□ -1.13
CACNA1C-229ENST00000496818 LTN1O94822 1766 aa8□□□□□ -1.13
CACNA1C-229ENST00000496818 MEGF6O75095 1541 aa8□□□□□ -1.13
CACNA1C-229ENST00000496818 HOXC9P31274 260 aa8□□□□□ -1.13
CACNA1C-229ENST00000496818 LAPTM4BQ86VI4 370 aa8□□□□□ -1.13
CACNA1C-229ENST00000496818 CCNL1Q9UK58 526 aaPredicted RBP8□□□□□ -1.13
CACNA1C-229ENST00000496818 CGNL1Q0VF96 1302 aa8□□□□□ -1.13
CACNA1C-229ENST00000496818 MAP3K19Q56UN5 1328 aa8□□□□□ -1.13
CACNA1C-229ENST00000496818 PNPLA7Q6ZV29 1317 aa8□□□□□ -1.13
CACNA1C-229ENST00000496818 GOLGA8CPA6NN73 597 aa7.99□□□□□ -1.13
CACNA1C-229ENST00000496818 CFHP08603 1231 aa7.99□□□□□ -1.13
CACNA1C-229ENST00000496818 C1QTNF8P60827 252 aa7.99□□□□□ -1.13
CACNA1C-229ENST00000496818 RAPGEF4Q8WZA2 1011 aa7.99□□□□□ -1.13
CACNA1C-229ENST00000496818 LRRC4BQ9NT99 713 aa7.99□□□□□ -1.13
CACNA1C-229ENST00000496818 PCDH11XQ9BZA7 1347 aa7.99□□□□□ -1.13
CACNA1C-229ENST00000496818 PCDH11YQ9BZA8 1340 aa7.99□□□□□ -1.13
CACNA1C-229ENST00000496818 BTAF1O14981 1849 aa7.99□□□□□ -1.13
CACNA1C-229ENST00000496818 NSD2O96028 1365 aa7.98□□□□□ -1.13
CACNA1C-229ENST00000496818 NSD3Q9BZ95 1437 aa7.98□□□□□ -1.13
CACNA1C-229ENST00000496818 HOXA2O43364 376 aa7.98□□□□□ -1.13
CACNA1C-229ENST00000496818 FDX1P10109 184 aa7.98□□□□□ -1.13
CACNA1C-229ENST00000496818 FUT2Q10981 343 aa7.98□□□□□ -1.13
CACNA1C-229ENST00000496818 RTL5Q5HYW3 569 aaPredicted RBP7.98□□□□□ -1.13
CACNA1C-229ENST00000496818 ZCRB1Q8TBF4 217 aaKnown RBP7.98□□□□□ -1.13
CACNA1C-229ENST00000496818 CLUAP1Q96AJ1 413 aa7.98□□□□□ -1.13
CACNA1C-229ENST00000496818 LRCH3Q96II8 777 aa7.98□□□□□ -1.13
CACNA1C-229ENST00000496818 DOT1LQ8TEK3 1739 aa7.98□□□□□ -1.13
CACNA1C-229ENST00000496818 RGPD5Q99666 1765 aa7.97□□□□□ -1.13
CACNA1C-229ENST00000496818 HRO43593 1189 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms