RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 ZBTB1Q9Y2K1 713 aa10.79□□□□□ -0.68
U2AF1-212ENST00000496462 RGPD2P0DJD1 1756 aa10.79□□□□□ -0.68
U2AF1-212ENST00000496462 ALDH1L1O75891 902 aa10.79□□□□□ -0.68
U2AF1-212ENST00000496462 ARHGAP45Q92619 1136 aa10.79□□□□□ -0.68
U2AF1-212ENST00000496462 KCNQ3O43525 872 aa10.78□□□□□ -0.68
U2AF1-212ENST00000496462 VAMP4O75379 141 aa10.78□□□□□ -0.68
U2AF1-212ENST00000496462 KDM6AO15550 1401 aaPredicted RBP10.78□□□□□ -0.68
U2AF1-212ENST00000496462 RGL2O15211 777 aa10.78□□□□□ -0.68
U2AF1-212ENST00000496462 MAP3K15Q6ZN16 1313 aa10.78□□□□□ -0.68
U2AF1-212ENST00000496462 PDE6BP35913 854 aa10.77□□□□□ -0.68
U2AF1-212ENST00000496462 HSP90AB4PQ58FF6 505 aa10.77□□□□□ -0.68
U2AF1-212ENST00000496462 CLUAP1Q96AJ1 413 aa10.77□□□□□ -0.68
U2AF1-212ENST00000496462 MTFR1LQ9H019 292 aa10.77□□□□□ -0.68
U2AF1-212ENST00000496462 MAP3K2Q9Y2U5 619 aa10.77□□□□□ -0.68
U2AF1-212ENST00000496462 KCNJ4P48050 445 aa10.77□□□□□ -0.69
U2AF1-212ENST00000496462 ATF7IPQ6VMQ6 1270 aa10.77□□□□□ -0.69
U2AF1-212ENST00000496462 TNS1Q9HBL0 1735 aaKnown RBP10.77□□□□□ -0.69
U2AF1-212ENST00000496462 GPTP24298 496 aa10.77□□□□□ -0.69
U2AF1-212ENST00000496462 DDX46Q7L014 1031 aaKnown RBP10.77□□□□□ -0.69
U2AF1-212ENST00000496462 LINS1Q8NG48 757 aa10.77□□□□□ -0.69
U2AF1-212ENST00000496462 PI4KAP2A4QPH2 592 aa10.76□□□□□ -0.69
U2AF1-212ENST00000496462 PI4KAP1Q8N8J0 262 aa10.76□□□□□ -0.69
U2AF1-212ENST00000496462 SSH1Q8WYL5 1049 aa10.76□□□□□ -0.69
U2AF1-212ENST00000496462 WWC3Q9ULE0 1092 aa10.76□□□□□ -0.69
U2AF1-212ENST00000496462 NOB1Q9ULX3 412 aaKnown RBP10.76□□□□□ -0.69
U2AF1-212ENST00000496462 COL15A1P39059 1388 aa10.76□□□□□ -0.69
U2AF1-212ENST00000496462 USPL1Q5W0Q7 1092 aa10.76□□□□□ -0.69
U2AF1-212ENST00000496462 CCDC191Q8NCU4 936 aa10.76□□□□□ -0.69
U2AF1-212ENST00000496462 IGHMBP2P38935 993 aaKnown RBP10.76□□□□□ -0.69
U2AF1-212ENST00000496462 RARSP54136 660 aaKnown RBP10.76□□□□□ -0.69
U2AF1-212ENST00000496462 CDC5LQ99459 802 aaKnown RBP10.76□□□□□ -0.69
U2AF1-212ENST00000496462 H0YIN7 160 aa10.75□□□□□ -0.69
U2AF1-212ENST00000496462 PDE3AQ14432 1141 aa10.75□□□□□ -0.69
U2AF1-212ENST00000496462 CCDC57Q2TAC2 916 aa10.75□□□□□ -0.69
U2AF1-212ENST00000496462 RNF123Q5XPI4 1314 aa10.75□□□□□ -0.69
U2AF1-212ENST00000496462 SH3TC1Q8TE82 1336 aa10.75□□□□□ -0.69
U2AF1-212ENST00000496462 CCDC152Q4G0S7 254 aa10.75□□□□□ -0.69
U2AF1-212ENST00000496462 TCIRG1Q13488 830 aa10.75□□□□□ -0.69
U2AF1-212ENST00000496462 GIGYF2Q6Y7W6 1299 aaKnown RBP10.75□□□□□ -0.69
U2AF1-212ENST00000496462 LINC00116Q8NCU8 138 aa10.75□□□□□ -0.69
U2AF1-212ENST00000496462 MPHOSPH8Q99549 860 aa10.75□□□□□ -0.69
U2AF1-212ENST00000496462 METTL22Q9BUU2 404 aaPredicted RBP10.75□□□□□ -0.69
U2AF1-212ENST00000496462 GORABQ5T7V8 394 aa10.75□□□□□ -0.69
U2AF1-212ENST00000496462 ARHGEF1Q92888 912 aaKnown RBP10.75□□□□□ -0.69
U2AF1-212ENST00000496462 ZNF622Q969S3 477 aaKnown RBP eCLIP10.75□□□□□ -0.69
U2AF1-212ENST00000496462 ANXA1P04083 346 aa10.74□□□□□ -0.69
U2AF1-212ENST00000496462 ITPK1Q13572 414 aa10.74□□□□□ -0.69
U2AF1-212ENST00000496462 GNAI2P04899 355 aa10.74□□□□□ -0.69
U2AF1-212ENST00000496462 RBM17Q96I25 401 aaKnown RBP10.74□□□□□ -0.69
U2AF1-212ENST00000496462 EIF5P55010 431 aaKnown RBP10.74□□□□□ -0.69
U2AF1-212ENST00000496462 G3BP1Q13283 466 aaKnown RBP eCLIP10.74□□□□□ -0.69
U2AF1-212ENST00000496462 SOGA3Q5TF21 947 aa10.74□□□□□ -0.69
U2AF1-212ENST00000496462 COL23A1Q86Y22 540 aaPredicted RBP10.74□□□□□ -0.69
U2AF1-212ENST00000496462 FHDC1Q9C0D6 1143 aaPredicted RBP10.74□□□□□ -0.69
U2AF1-212ENST00000496462 BCL11AQ9H165 835 aa10.74□□□□□ -0.69
U2AF1-212ENST00000496462 SUPT16HQ9Y5B9 1047 aaKnown RBP10.74□□□□□ -0.69
U2AF1-212ENST00000496462 PNPLA7Q6ZV29 1317 aa10.73□□□□□ -0.69
U2AF1-212ENST00000496462 ALDH1B1P30837 517 aa10.73□□□□□ -0.69
U2AF1-212ENST00000496462 AKT1S1Q96B36 256 aa10.73□□□□□ -0.69
U2AF1-212ENST00000496462 RWDD1Q9H446 243 aaPredicted RBP10.73□□□□□ -0.69
U2AF1-212ENST00000496462 KRT24Q2M2I5 525 aa10.73□□□□□ -0.69
U2AF1-212ENST00000496462 MRPL50Q8N5N7 158 aaKnown RBP10.73□□□□□ -0.69
U2AF1-212ENST00000496462 TSPYL6Q8N831 410 aa10.73□□□□□ -0.69
U2AF1-212ENST00000496462 CNKSR1Q969H4 720 aa10.73□□□□□ -0.69
U2AF1-212ENST00000496462 SERPINB2P05120 415 aa10.73□□□□□ -0.69
U2AF1-212ENST00000496462 MMP10P09238 476 aa10.73□□□□□ -0.69
U2AF1-212ENST00000496462 PIP4K2AP48426 406 aaPredicted RBP10.73□□□□□ -0.69
U2AF1-212ENST00000496462 GPATCH3Q96I76 525 aa10.72□□□□□ -0.69
U2AF1-212ENST00000496462 WNK3Q9BYP7 1800 aa10.72□□□□□ -0.69
U2AF1-212ENST00000496462 ANKRD18BA2A2Z9 1011 aa10.72□□□□□ -0.69
U2AF1-212ENST00000496462 GPR162Q16538 588 aa10.72□□□□□ -0.69
U2AF1-212ENST00000496462 ATP5J2-PTCD1G3V325 749 aa10.72□□□□□ -0.69
U2AF1-212ENST00000496462 FRAT2O75474 233 aaPredicted RBP10.72□□□□□ -0.69
U2AF1-212ENST00000496462 RRP1P56182 461 aaKnown RBP10.72□□□□□ -0.69
U2AF1-212ENST00000496462 IFIT5Q13325 482 aaKnown RBP10.72□□□□□ -0.69
U2AF1-212ENST00000496462 CNNM1Q9NRU3 951 aa10.72□□□□□ -0.69
U2AF1-212ENST00000496462 BTAF1O14981 1849 aa10.72□□□□□ -0.69
U2AF1-212ENST00000496462 SBF2Q86WG5 1849 aa10.72□□□□□ -0.69
U2AF1-212ENST00000496462 CARMIL3Q8ND23 1372 aa10.71□□□□□ -0.69
U2AF1-212ENST00000496462 TMC4Q7Z404 712 aa10.71□□□□□ -0.69
U2AF1-212ENST00000496462 ZNF521Q96K83 1311 aa10.71□□□□□ -0.7
U2AF1-212ENST00000496462 VPS37DQ86XT2 251 aa10.71□□□□□ -0.7
U2AF1-212ENST00000496462 CCDC136Q96JN2 1154 aa10.71□□□□□ -0.7
U2AF1-212ENST00000496462 DOT1LQ8TEK3 1739 aa10.7□□□□□ -0.7
U2AF1-212ENST00000496462 IRS4O14654 1257 aaPredicted RBP10.7□□□□□ -0.7
U2AF1-212ENST00000496462 ERC1Q8IUD2 1116 aa10.7□□□□□ -0.7
U2AF1-212ENST00000496462 SYT17Q9BSW7 474 aa10.7□□□□□ -0.7
U2AF1-212ENST00000496462 NHSQ6T4R5 1651 aa10.7□□□□□ -0.7
U2AF1-212ENST00000496462 USP42Q9H9J4 1324 aaKnown RBP10.7□□□□□ -0.7
U2AF1-212ENST00000496462 RTL5Q5HYW3 569 aaPredicted RBP10.7□□□□□ -0.7
U2AF1-212ENST00000496462 GRM8O00222 908 aa10.7□□□□□ -0.7
U2AF1-212ENST00000496462 ERICH6BQ5W0A0 696 aa10.7□□□□□ -0.7
U2AF1-212ENST00000496462 TTLL7Q6ZT98 887 aa10.7□□□□□ -0.7
U2AF1-212ENST00000496462 PDE8AO60658 829 aa10.69□□□□□ -0.7
U2AF1-212ENST00000496462 GRIPAP1Q4V328 841 aa10.69□□□□□ -0.7
U2AF1-212ENST00000496462 CC2D2BQ6DHV5 1058 aa10.69□□□□□ -0.7
U2AF1-212ENST00000496462 UBE3BQ7Z3V4 1068 aa10.69□□□□□ -0.7
U2AF1-212ENST00000496462 PHAXQ9H814 394 aaKnown RBP10.69□□□□□ -0.7
U2AF1-212ENST00000496462 EIF5BO60841 1220 aaKnown RBP10.69□□□□□ -0.7
U2AF1-212ENST00000496462 PTGER2P43116 358 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms