RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 NUP98P52948 1817 aa18.9■□□□□ 0.62
PDAP1-204ENST00000496335 ARFGEF1Q9Y6D6 1849 aa18.9■□□□□ 0.62
PDAP1-204ENST00000496335 ANXA1P04083 346 aa18.9■□□□□ 0.62
PDAP1-204ENST00000496335 PDIA6Q15084 440 aa18.9■□□□□ 0.62
PDAP1-204ENST00000496335 DALRD3Q5D0E6 543 aaKnown RBP18.9■□□□□ 0.62
PDAP1-204ENST00000496335 CFAP44Q96MT7 982 aa18.9■□□□□ 0.62
PDAP1-204ENST00000496335 NPHP1O15259 732 aa18.89■□□□□ 0.61
PDAP1-204ENST00000496335 PROSER3Q2NL68 480 aa18.89■□□□□ 0.61
PDAP1-204ENST00000496335 ARHGAP27Q6ZUM4 889 aa18.89■□□□□ 0.61
PDAP1-204ENST00000496335 C2CD5Q86YS7 1000 aa18.89■□□□□ 0.61
PDAP1-204ENST00000496335 CNBD1Q8NA66 436 aa18.89■□□□□ 0.61
PDAP1-204ENST00000496335 MBIPQ9NS73 344 aa18.89■□□□□ 0.61
PDAP1-204ENST00000496335 NIP7Q9Y221 180 aaKnown RBP eCLIP18.89■□□□□ 0.61
PDAP1-204ENST00000496335 ERBB4Q15303 1308 aa18.89■□□□□ 0.61
PDAP1-204ENST00000496335 DLEC1Q9Y238 1755 aa18.88■□□□□ 0.61
PDAP1-204ENST00000496335 FAM177BA6PVY3 158 aa18.88■□□□□ 0.61
PDAP1-204ENST00000496335 NBPF5PQ86XG9 351 aaPredicted RBP18.88■□□□□ 0.61
PDAP1-204ENST00000496335 BRIP1Q9BX63 1249 aa18.88■□□□□ 0.61
PDAP1-204ENST00000496335 ZBTB3Q9H5J0 574 aa18.88■□□□□ 0.61
PDAP1-204ENST00000496335 MAP3K15Q6ZN16 1313 aa18.88■□□□□ 0.61
PDAP1-204ENST00000496335 H0YIN7 160 aa18.87■□□□□ 0.61
PDAP1-204ENST00000496335 ZNF853P0CG23 659 aa18.87■□□□□ 0.61
PDAP1-204ENST00000496335 KIF6Q6ZMV9 814 aa18.87■□□□□ 0.61
PDAP1-204ENST00000496335 LRP10Q7Z4F1 713 aa18.87■□□□□ 0.61
PDAP1-204ENST00000496335 ERVV-1B6SEH8 477 aa18.86■□□□□ 0.61
PDAP1-204ENST00000496335 RGL2O15211 777 aa18.86■□□□□ 0.61
PDAP1-204ENST00000496335 PDE6BP35913 854 aa18.85■□□□□ 0.61
PDAP1-204ENST00000496335 ST5P78524 1137 aa18.85■□□□□ 0.61
PDAP1-204ENST00000496335 IFT57Q9NWB7 429 aa18.85■□□□□ 0.61
PDAP1-204ENST00000496335 COL11A2P13942 1736 aaPredicted RBP18.85■□□□□ 0.61
PDAP1-204ENST00000496335 GNAI1P63096 354 aa18.84■□□□□ 0.61
PDAP1-204ENST00000496335 CALD1Q05682 793 aaKnown RBP18.84■□□□□ 0.61
PDAP1-204ENST00000496335 DUSP27Q5VZP5 1158 aa18.84■□□□□ 0.61
PDAP1-204ENST00000496335 TTLL6Q8N841 843 aa18.84■□□□□ 0.61
PDAP1-204ENST00000496335 ZNF622Q969S3 477 aaKnown RBP eCLIP18.84■□□□□ 0.617e-9■■□□□ 14.4
PDAP1-204ENST00000496335 GPTP24298 496 aa18.83■□□□□ 0.6
PDAP1-204ENST00000496335 AIMP1Q12904 312 aaKnown RBP18.83■□□□□ 0.6
PDAP1-204ENST00000496335 HDGFL1Q5TGJ6 251 aa18.83■□□□□ 0.6
PDAP1-204ENST00000496335 TPTE2Q6XPS3 522 aa18.83■□□□□ 0.6
PDAP1-204ENST00000496335 DDX21Q9NR30 783 aaKnown RBP eCLIP18.83■□□□□ 0.6
PDAP1-204ENST00000496335 CHPF2Q9P2E5 772 aa18.83■□□□□ 0.6
PDAP1-204ENST00000496335 ATP10DQ9P241 1426 aa18.83■□□□□ 0.6
PDAP1-204ENST00000496335 ADCY9O60503 1353 aa18.82■□□□□ 0.6
PDAP1-204ENST00000496335 ELL2O00472 640 aaPredicted RBP18.82■□□□□ 0.6
PDAP1-204ENST00000496335 GIGYF2Q6Y7W6 1299 aaKnown RBP18.82■□□□□ 0.6
PDAP1-204ENST00000496335 COPS6Q7L5N1 327 aa18.82■□□□□ 0.6
PDAP1-204ENST00000496335 XAGE3Q8WTP9 111 aa18.82■□□□□ 0.6
PDAP1-204ENST00000496335 UBN2Q6ZU65 1347 aa18.81■□□□□ 0.6
PDAP1-204ENST00000496335 HOXB7P09629 217 aa18.81■□□□□ 0.6
PDAP1-204ENST00000496335 WWC1Q8IX03 1113 aa18.81■□□□□ 0.6
PDAP1-204ENST00000496335 FAM9BQ8IZU0 186 aa18.81■□□□□ 0.6
PDAP1-204ENST00000496335 PDZRN3Q9UPQ7 1066 aa18.81■□□□□ 0.6
PDAP1-204ENST00000496335 SALL2Q9Y467 1007 aaPredicted RBP18.81■□□□□ 0.6
PDAP1-204ENST00000496335 CACNA1SQ13698 1873 aa18.81■□□□□ 0.6
PDAP1-204ENST00000496335 SRGNP10124 158 aa18.8■□□□□ 0.6
PDAP1-204ENST00000496335 GTF2E1P29083 439 aaPredicted RBP18.8■□□□□ 0.6
PDAP1-204ENST00000496335 CCDC27Q2M243 656 aa18.8■□□□□ 0.6
PDAP1-204ENST00000496335 NUTM1Q86Y26 1132 aa18.8■□□□□ 0.6
PDAP1-204ENST00000496335 ZNF34Q8IZ26 560 aa18.8■□□□□ 0.6
PDAP1-204ENST00000496335 ZNF526Q8TF50 670 aaPredicted RBP18.8■□□□□ 0.6
PDAP1-204ENST00000496335 ZNF219Q9P2Y4 722 aaPredicted RBP18.8■□□□□ 0.6
PDAP1-204ENST00000496335 SBF1O95248 1867 aa18.8■□□□□ 0.6
PDAP1-204ENST00000496335 SLX4Q8IY92 1834 aa18.79■□□□□ 0.6
PDAP1-204ENST00000496335 SUSD4Q5VX71 490 aa18.79■□□□□ 0.6
PDAP1-204ENST00000496335 C8orf58Q8NAV2 365 aa18.79■□□□□ 0.6
PDAP1-204ENST00000496335 TSR2Q969E8 191 aaKnown RBP18.79■□□□□ 0.6
PDAP1-204ENST00000496335 ERFEQ4G0M1 354 aa18.78■□□□□ 0.6
PDAP1-204ENST00000496335 C9orf131Q5VYM1 1079 aa18.78■□□□□ 0.6
PDAP1-204ENST00000496335 MASTLQ96GX5 879 aa18.78■□□□□ 0.6
PDAP1-204ENST00000496335 DBF4Q9UBU7 674 aaPredicted RBP18.78■□□□□ 0.6
PDAP1-204ENST00000496335 KLRG2A4D1S0 409 aaPredicted RBP18.77■□□□□ 0.6
PDAP1-204ENST00000496335 C21orf2O43822 256 aa18.77■□□□□ 0.6
PDAP1-204ENST00000496335 RASSF7Q02833 373 aa18.77■□□□□ 0.6
PDAP1-204ENST00000496335 STYK1Q6J9G0 422 aa18.77■□□□□ 0.6
PDAP1-204ENST00000496335 NYXQ9GZU5 481 aa18.77■□□□□ 0.6
PDAP1-204ENST00000496335 ABCC12Q96J65 1359 aa18.77■□□□□ 0.6
PDAP1-204ENST00000496335 TNRC6CQ9HCJ0 1690 aaKnown RBP18.76■□□□□ 0.59
PDAP1-204ENST00000496335 CCDC88AQ3V6T2 1871 aa18.76■□□□□ 0.59
PDAP1-204ENST00000496335 TSPYL6Q8N831 410 aa18.76■□□□□ 0.59
PDAP1-204ENST00000496335 CNKSR1Q969H4 720 aa18.76■□□□□ 0.59
PDAP1-204ENST00000496335 ANKRD36CQ5JPF3 1778 aa18.76■□□□□ 0.59
PDAP1-204ENST00000496335 NTSR2O95665 410 aa18.75■□□□□ 0.59
PDAP1-204ENST00000496335 PRPF40BQ6NWY9 871 aaKnown RBP18.75■□□□□ 0.59
PDAP1-204ENST00000496335 GPBP1L1Q9HC44 474 aaPredicted RBP18.75■□□□□ 0.59
PDAP1-204ENST00000496335 RNF181Q9P0P0 153 aa18.75■□□□□ 0.59
PDAP1-204ENST00000496335 ARFGEF2Q9Y6D5 1785 aa18.74■□□□□ 0.59
PDAP1-204ENST00000496335 NFKBIEO00221 500 aa18.74■□□□□ 0.59
PDAP1-204ENST00000496335 NPR1P16066 1061 aa18.74■□□□□ 0.59
PDAP1-204ENST00000496335 PRELPP51888 382 aa18.74■□□□□ 0.59
PDAP1-204ENST00000496335 NCBP3Q53F19 620 aaKnown RBP18.74■□□□□ 0.59
PDAP1-204ENST00000496335 PARP10Q53GL7 1025 aa18.74■□□□□ 0.59
PDAP1-204ENST00000496335 HYPKQ9NX55 129 aa18.74■□□□□ 0.59
PDAP1-204ENST00000496335 IBTKQ9P2D0 1353 aaPredicted RBP18.73■□□□□ 0.59
PDAP1-204ENST00000496335 TCIRG1Q13488 830 aa18.73■□□□□ 0.59
PDAP1-204ENST00000496335 ANKRD13DQ6ZTN6 518 aa18.73■□□□□ 0.59
PDAP1-204ENST00000496335 PPP1R42Q7Z4L9 355 aa18.73■□□□□ 0.59
PDAP1-204ENST00000496335 PLBD2Q8NHP8 589 aa18.73■□□□□ 0.59
PDAP1-204ENST00000496335 ZNF428Q96B54 188 aa18.73■□□□□ 0.59
PDAP1-204ENST00000496335 PHAXQ9H814 394 aaKnown RBP18.73■□□□□ 0.59
PDAP1-204ENST00000496335 IL16Q14005 1332 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms