RNA–Protein interactions for RNA: ENST00000496055.5

RABGGTB-213, Transcript of Rab geranylgeranyltransferase subunit beta, humanhuman

TSL 2

Gene RABGGTB, Length 3,863 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTB-213ENST00000496055 CREBRFQ8IUR6 639 aa5.65□□□□□ -1.51
RABGGTB-213ENST00000496055 MSL3Q8N5Y2 521 aaKnown RBP5.65□□□□□ -1.51
RABGGTB-213ENST00000496055 TOPAZ1Q8N9V7 1692 aa5.65□□□□□ -1.51
RABGGTB-213ENST00000496055 SETDB1Q15047 1291 aa5.64□□□□□ -1.51
RABGGTB-213ENST00000496055 PLEKHO1Q53GL0 409 aaPredicted RBP5.64□□□□□ -1.51
RABGGTB-213ENST00000496055 CALR3Q96L12 384 aaKnown RBP5.64□□□□□ -1.51
RABGGTB-213ENST00000496055 CCDC87Q9NVE4 849 aa5.64□□□□□ -1.51
RABGGTB-213ENST00000496055 MAP3K19Q56UN5 1328 aa5.64□□□□□ -1.51
RABGGTB-213ENST00000496055 FLT4P35916 1363 aa5.64□□□□□ -1.51
RABGGTB-213ENST00000496055 TNS1Q9HBL0 1735 aaKnown RBP5.64□□□□□ -1.51
RABGGTB-213ENST00000496055 PTGER2P43116 358 aa5.64□□□□□ -1.51
RABGGTB-213ENST00000496055 KRBA2Q6ZNG9 492 aa5.64□□□□□ -1.51
RABGGTB-213ENST00000496055 IFNL2Q8IZJ0 200 aa5.64□□□□□ -1.51
RABGGTB-213ENST00000496055 CCDC82Q8N4S0 544 aa5.64□□□□□ -1.51
RABGGTB-213ENST00000496055 GGNBP2Q9H3C7 697 aa5.64□□□□□ -1.51
RABGGTB-213ENST00000496055 LMO7Q8WWI1 1683 aa5.64□□□□□ -1.51
RABGGTB-213ENST00000496055 A0A1W2PP64 1363 aa5.64□□□□□ -1.51
RABGGTB-213ENST00000496055 GOLGA6L3A6NEY3 463 aa5.63□□□□□ -1.51
RABGGTB-213ENST00000496055 RIOK3O14730 519 aaKnown RBP5.63□□□□□ -1.51
RABGGTB-213ENST00000496055 GORABQ5T7V8 394 aa5.63□□□□□ -1.51
RABGGTB-213ENST00000496055 MKL1Q969V6 931 aa5.63□□□□□ -1.51
RABGGTB-213ENST00000496055 PARP3Q9Y6F1 533 aa5.63□□□□□ -1.51
RABGGTB-213ENST00000496055 PPFIA4O75335 1185 aa5.63□□□□□ -1.51
RABGGTB-213ENST00000496055 CCDC181Q5TID7 509 aa5.63□□□□□ -1.51
RABGGTB-213ENST00000496055 PROM2Q8N271 834 aa5.63□□□□□ -1.51
RABGGTB-213ENST00000496055 NLGN1Q8N2Q7 840 aa5.63□□□□□ -1.51
RABGGTB-213ENST00000496055 CCDC97Q96F63 343 aaPredicted RBP5.63□□□□□ -1.51
RABGGTB-213ENST00000496055 CGNQ9P2M7 1197 aaKnown RBP5.63□□□□□ -1.51
RABGGTB-213ENST00000496055 RTCBQ9Y3I0 505 aaKnown RBP5.63□□□□□ -1.51
RABGGTB-213ENST00000496055 NPHP1O15259 732 aa5.63□□□□□ -1.51
RABGGTB-213ENST00000496055 ANP32CO43423 234 aa5.63□□□□□ -1.51
RABGGTB-213ENST00000496055 AMOTQ4VCS5 1084 aa5.63□□□□□ -1.51
RABGGTB-213ENST00000496055 AKT1S1Q96B36 256 aa5.63□□□□□ -1.51
RABGGTB-213ENST00000496055 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.63□□□□□ -1.511e-7■□□□□ 10.3
RABGGTB-213ENST00000496055 NUB1Q9Y5A7 615 aa5.63□□□□□ -1.51
RABGGTB-213ENST00000496055 EPB41L2O43491 1005 aaKnown RBP5.62□□□□□ -1.51
RABGGTB-213ENST00000496055 PEX14O75381 377 aa5.62□□□□□ -1.51
RABGGTB-213ENST00000496055 RFC4P35249 363 aa5.62□□□□□ -1.51
RABGGTB-213ENST00000496055 TRAPPC3LQ5T215 181 aa5.62□□□□□ -1.51
RABGGTB-213ENST00000496055 PALLDQ8WX93 1383 aa5.62□□□□□ -1.51
RABGGTB-213ENST00000496055 KAT6BQ8WYB5 2073 aa5.62□□□□□ -1.51
RABGGTB-213ENST00000496055 RGPD3A6NKT7 1758 aaPredicted RBP5.62□□□□□ -1.51
RABGGTB-213ENST00000496055 RGPD4Q7Z3J3 1758 aa5.62□□□□□ -1.51
RABGGTB-213ENST00000496055 INSRP06213 1382 aa5.62□□□□□ -1.51
RABGGTB-213ENST00000496055 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.62□□□□□ -1.51
RABGGTB-213ENST00000496055 CABP4P57796 275 aa5.62□□□□□ -1.51
RABGGTB-213ENST00000496055 RRS1Q15050 365 aaKnown RBP5.62□□□□□ -1.51
RABGGTB-213ENST00000496055 MSL1Q68DK7 614 aa5.62□□□□□ -1.51
RABGGTB-213ENST00000496055 ITFG2Q969R8 447 aa5.62□□□□□ -1.51
RABGGTB-213ENST00000496055 RBM42Q9BTD8 480 aaKnown RBP5.62□□□□□ -1.51
RABGGTB-213ENST00000496055 KIF4AO95239 1232 aa5.62□□□□□ -1.51
RABGGTB-213ENST00000496055 ATP6V1AP38606 617 aa5.62□□□□□ -1.51
RABGGTB-213ENST00000496055 ZNF827Q17R98 1081 aa5.62□□□□□ -1.51
RABGGTB-213ENST00000496055 CSPP1Q1MSJ5 1256 aa5.62□□□□□ -1.51
RABGGTB-213ENST00000496055 CCDC94Q9BW85 323 aaPredicted RBP5.62□□□□□ -1.51
RABGGTB-213ENST00000496055 PNPLA7Q6ZV29 1317 aa5.61□□□□□ -1.51
RABGGTB-213ENST00000496055 GNPATO15228 680 aa5.61□□□□□ -1.51
RABGGTB-213ENST00000496055 CCDC172P0C7W6 258 aa5.61□□□□□ -1.51
RABGGTB-213ENST00000496055 ANKRD13AQ8IZ07 590 aa5.61□□□□□ -1.51
RABGGTB-213ENST00000496055 RBM28Q9NW13 759 aaKnown RBP5.61□□□□□ -1.51
RABGGTB-213ENST00000496055 PNMA2Q9UL42 364 aa5.61□□□□□ -1.51
RABGGTB-213ENST00000496055 RREB1Q92766 1687 aa5.61□□□□□ -1.51
RABGGTB-213ENST00000496055 LRRC37A3O60309 1634 aa5.61□□□□□ -1.51
RABGGTB-213ENST00000496055 NUP188Q5SRE5 1749 aa5.61□□□□□ -1.51
RABGGTB-213ENST00000496055 MPHOSPH10O00566 681 aaKnown RBP5.61□□□□□ -1.51
RABGGTB-213ENST00000496055 KNSTRNQ9Y448 316 aa5.61□□□□□ -1.51
RABGGTB-213ENST00000496055 CRYBG1Q9Y4K1 1723 aa5.61□□□□□ -1.51
RABGGTB-213ENST00000496055 EIF4G2P78344 907 aaKnown RBP eCLIP5.61□□□□□ -1.51
RABGGTB-213ENST00000496055 C1QTNF12Q5T7M4 302 aa5.61□□□□□ -1.51
RABGGTB-213ENST00000496055 ZKSCAN2Q63HK3 967 aa5.61□□□□□ -1.51
RABGGTB-213ENST00000496055 MORC1Q86VD1 984 aa5.61□□□□□ -1.51
RABGGTB-213ENST00000496055 USHBP1Q8N6Y0 703 aa5.61□□□□□ -1.51
RABGGTB-213ENST00000496055 CAPN2P17655 700 aa5.6□□□□□ -1.51
RABGGTB-213ENST00000496055 PTF1AQ7RTS3 328 aa5.6□□□□□ -1.51
RABGGTB-213ENST00000496055 KCNV2Q8TDN2 545 aa5.6□□□□□ -1.51
RABGGTB-213ENST00000496055 AKAP12Q02952 1782 aa5.6□□□□□ -1.51
RABGGTB-213ENST00000496055 KDM2BQ8NHM5 1336 aa5.6□□□□□ -1.51
RABGGTB-213ENST00000496055 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.6□□□□□ -1.51
RABGGTB-213ENST00000496055 ZPR1O75312 459 aa5.6□□□□□ -1.51
RABGGTB-213ENST00000496055 ERCC3P19447 782 aa5.6□□□□□ -1.51
RABGGTB-213ENST00000496055 ZRSR2Q15696 482 aaKnown RBP5.6□□□□□ -1.51
RABGGTB-213ENST00000496055 CCDC184Q52MB2 194 aa5.6□□□□□ -1.51
RABGGTB-213ENST00000496055 ZC3H12AQ5D1E8 599 aaKnown RBP5.6□□□□□ -1.51
RABGGTB-213ENST00000496055 COL23A1Q86Y22 540 aaPredicted RBP5.6□□□□□ -1.51
RABGGTB-213ENST00000496055 FEZ2Q9UHY8 353 aaPredicted RBP5.6□□□□□ -1.51
RABGGTB-213ENST00000496055 NFAT5O94916 1531 aa5.6□□□□□ -1.51
RABGGTB-213ENST00000496055 LOC102724428A0A0B4J2F2 783 aa5.6□□□□□ -1.51
RABGGTB-213ENST00000496055 FYB1O15117 783 aa5.6□□□□□ -1.51
RABGGTB-213ENST00000496055 SIK1P57059 783 aa5.6□□□□□ -1.51
RABGGTB-213ENST00000496055 TGFB2P61812 414 aa5.6□□□□□ -1.51
RABGGTB-213ENST00000496055 ARHGAP27Q6ZUM4 889 aa5.6□□□□□ -1.51
RABGGTB-213ENST00000496055 MTERF4Q7Z6M4 381 aaKnown RBP5.6□□□□□ -1.51
RABGGTB-213ENST00000496055 CXorf38Q8TB03 319 aa5.6□□□□□ -1.51
RABGGTB-213ENST00000496055 MYCBPQ99417 103 aaPredicted RBP5.6□□□□□ -1.51
RABGGTB-213ENST00000496055 BCS1LQ9Y276 419 aa5.6□□□□□ -1.51
RABGGTB-213ENST00000496055 ERVV-2B6SEH9 535 aa5.59□□□□□ -1.51
RABGGTB-213ENST00000496055 FCHSD2O94868 740 aa5.59□□□□□ -1.51
RABGGTB-213ENST00000496055 CALRP27797 417 aaKnown RBP5.59□□□□□ -1.51
RABGGTB-213ENST00000496055 TDO2P48775 406 aa5.59□□□□□ -1.51
RABGGTB-213ENST00000496055 LONRF3Q496Y0 759 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms