RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 CNBD1Q8NA66 436 aa16.13■□□□□ 0.17
SHROOM1-206ENST00000495680 DICER1Q9UPY3 1922 aaKnown RBP16.12■□□□□ 0.17
SHROOM1-206ENST00000495680 VEGFAP15692 232 aaPredicted RBP16.12■□□□□ 0.17
SHROOM1-206ENST00000495680 SRGNP10124 158 aa16.11■□□□□ 0.17
SHROOM1-206ENST00000495680 JMYQ8N9B5 988 aa16.11■□□□□ 0.17
SHROOM1-206ENST00000495680 NUDCQ9Y266 331 aa16.11■□□□□ 0.17
SHROOM1-206ENST00000495680 SNRPA1P09661 255 aaKnown RBP16.1■□□□□ 0.17
SHROOM1-206ENST00000495680 ERFEQ4G0M1 354 aa16.1■□□□□ 0.17
SHROOM1-206ENST00000495680 STYK1Q6J9G0 422 aa16.1■□□□□ 0.17
SHROOM1-206ENST00000495680 PRPF40BQ6NWY9 871 aaKnown RBP16.1■□□□□ 0.17
SHROOM1-206ENST00000495680 MIS18AQ9NYP9 233 aa16.1■□□□□ 0.17
SHROOM1-206ENST00000495680 PDZRN3Q9UPQ7 1066 aa16.1■□□□□ 0.17
SHROOM1-206ENST00000495680 ARFGEF2Q9Y6D5 1785 aa16.1■□□□□ 0.17
SHROOM1-206ENST00000495680 NPHP1O15259 732 aa16.09■□□□□ 0.17
SHROOM1-206ENST00000495680 ST5P78524 1137 aa16.09■□□□□ 0.17
SHROOM1-206ENST00000495680 NPM2Q86SE8 214 aaKnown RBP16.09■□□□□ 0.17
SHROOM1-206ENST00000495680 RTF1Q92541 710 aaKnown RBP16.09■□□□□ 0.17
SHROOM1-206ENST00000495680 TAOK3Q9H2K8 898 aa16.09■□□□□ 0.17
SHROOM1-206ENST00000495680 NBPF5PQ86XG9 351 aaPredicted RBP16.08■□□□□ 0.16
SHROOM1-206ENST00000495680 CNKSR1Q969H4 720 aa16.08■□□□□ 0.16
SHROOM1-206ENST00000495680 MASTLQ96GX5 879 aa16.08■□□□□ 0.16
SHROOM1-206ENST00000495680 LTBP3Q9NS15 1303 aa16.08■□□□□ 0.16
SHROOM1-206ENST00000495680 DDNO94850 711 aaPredicted RBP16.07■□□□□ 0.16
SHROOM1-206ENST00000495680 POTEIP0CG38 1075 aa16.07■□□□□ 0.16
SHROOM1-206ENST00000495680 POTEJP0CG39 1038 aa16.07■□□□□ 0.16
SHROOM1-206ENST00000495680 HLFQ16534 295 aa16.07■□□□□ 0.16
SHROOM1-206ENST00000495680 OLFM4Q6UX06 510 aa16.07■□□□□ 0.16
SHROOM1-206ENST00000495680 C7orf43Q8WVR3 580 aa16.07■□□□□ 0.16
SHROOM1-206ENST00000495680 DLG5Q8TDM6 1919 aa16.07■□□□□ 0.16
SHROOM1-206ENST00000495680 PCNTO95613 3336 aa16.07■□□□□ 0.16
SHROOM1-206ENST00000495680 FAM177BA6PVY3 158 aa16.06■□□□□ 0.16
SHROOM1-206ENST00000495680 COL13A1Q5TAT6 717 aaPredicted RBP16.06■□□□□ 0.16
SHROOM1-206ENST00000495680 CLEC4GQ6UXB4 293 aa16.06■□□□□ 0.16
SHROOM1-206ENST00000495680 NIP7Q9Y221 180 aaKnown RBP eCLIP16.06■□□□□ 0.16
SHROOM1-206ENST00000495680 LAMB4A4D0S4 1761 aa16.05■□□□□ 0.16
SHROOM1-206ENST00000495680 DPY19L2Q6NUT2 758 aa16.05■□□□□ 0.16
SHROOM1-206ENST00000495680 HTATSF1O43719 755 aaKnown RBP16.04■□□□□ 0.16
SHROOM1-206ENST00000495680 TAF7Q15545 349 aaPredicted RBP16.04■□□□□ 0.16
SHROOM1-206ENST00000495680 THUMPD2Q9BTF0 503 aaKnown RBP16.04■□□□□ 0.16
SHROOM1-206ENST00000495680 ZNF652Q9Y2D9 606 aa16.04■□□□□ 0.16
SHROOM1-206ENST00000495680 KDM3BQ7LBC6 1761 aa16.04■□□□□ 0.16
SHROOM1-206ENST00000495680 KLRG2A4D1S0 409 aaPredicted RBP16.03■□□□□ 0.16
SHROOM1-206ENST00000495680 NGEFQ8N5V2 710 aa16.03■□□□□ 0.16
SHROOM1-206ENST00000495680 ABCC12Q96J65 1359 aa16.02■□□□□ 0.16
SHROOM1-206ENST00000495680 NPR1P16066 1061 aa16.02■□□□□ 0.16
SHROOM1-206ENST00000495680 TPTE2Q6XPS3 522 aa16.02■□□□□ 0.16
SHROOM1-206ENST00000495680 PLEKHF1Q96S99 279 aa16.02■□□□□ 0.16
SHROOM1-206ENST00000495680 ZNF277Q9NRM2 450 aaPredicted RBP16.02■□□□□ 0.16
SHROOM1-206ENST00000495680 ZNF541Q9H0D2 1346 aa16.01■□□□□ 0.15
SHROOM1-206ENST00000495680 CCDC93Q567U6 631 aa16.01■□□□□ 0.15
SHROOM1-206ENST00000495680 SOGA3Q5TF21 947 aa16.01■□□□□ 0.15
SHROOM1-206ENST00000495680 SLC51AQ86UW1 340 aa16.01■□□□□ 0.15
SHROOM1-206ENST00000495680 RGL2O15211 777 aa16■□□□□ 0.15
SHROOM1-206ENST00000495680 CHADLQ6NUI6 762 aa16■□□□□ 0.15
SHROOM1-206ENST00000495680 TTLL7Q6ZT98 887 aa16■□□□□ 0.15
SHROOM1-206ENST00000495680 NUTM1Q86Y26 1132 aa16■□□□□ 0.15
SHROOM1-206ENST00000495680 NUP98P52948 1817 aa16■□□□□ 0.15
SHROOM1-206ENST00000495680 HSPA1AP0DMV8 641 aaKnown RBP15.99■□□□□ 0.15
SHROOM1-206ENST00000495680 HSPA1BP0DMV9 641 aaKnown RBP15.99■□□□□ 0.15
SHROOM1-206ENST00000495680 EIF4A1P60842 406 aaKnown RBP15.99■□□□□ 0.15
SHROOM1-206ENST00000495680 FKBP4Q02790 459 aaKnown RBP eCLIP15.99■□□□□ 0.15
SHROOM1-206ENST00000495680 SNED1Q8TER0 1413 aa15.99■□□□□ 0.15
SHROOM1-206ENST00000495680 TAF1DQ9H5J8 278 aaPredicted RBP15.98■□□□□ 0.15
SHROOM1-206ENST00000495680 RRP7AQ9Y3A4 280 aaKnown RBP15.98■□□□□ 0.15
SHROOM1-206ENST00000495680 MAP3K15Q6ZN16 1313 aa15.97■□□□□ 0.15
SHROOM1-206ENST00000495680 UBN2Q6ZU65 1347 aa15.97■□□□□ 0.15
SHROOM1-206ENST00000495680 SCN4AP35499 1836 aa15.97■□□□□ 0.15
SHROOM1-206ENST00000495680 MYL6BP14649 208 aa15.97■□□□□ 0.15
SHROOM1-206ENST00000495680 GPTP24298 496 aa15.97■□□□□ 0.15
SHROOM1-206ENST00000495680 NFE2L2Q16236 605 aa15.97■□□□□ 0.15
SHROOM1-206ENST00000495680 L3MBTL3Q96JM7 780 aaPredicted RBP15.97■□□□□ 0.15
SHROOM1-206ENST00000495680 MKRN1Q9UHC7 482 aaKnown RBP15.97■□□□□ 0.15
SHROOM1-206ENST00000495680 COL4A5P29400 1685 aa15.97■□□□□ 0.15
SHROOM1-206ENST00000495680 GTF2E1P29083 439 aaPredicted RBP15.96■□□□□ 0.15
SHROOM1-206ENST00000495680 CRY2Q49AN0 593 aa15.96■□□□□ 0.15
SHROOM1-206ENST00000495680 SYNE4Q8N205 404 aa15.96■□□□□ 0.15
SHROOM1-206ENST00000495680 PNISRQ8TF01 805 aaKnown RBP15.96■□□□□ 0.15
SHROOM1-206ENST00000495680 ZBTB3Q9H5J0 574 aa15.96■□□□□ 0.15
SHROOM1-206ENST00000495680 PASKQ96RG2 1323 aa15.95■□□□□ 0.14
SHROOM1-206ENST00000495680 ERVV-1B6SEH8 477 aa15.95■□□□□ 0.14
SHROOM1-206ENST00000495680 CAPN15O75808 1086 aa15.95■□□□□ 0.14
SHROOM1-206ENST00000495680 IARSP41252 1262 aaKnown RBP15.95■□□□□ 0.14
SHROOM1-206ENST00000495680 SUSD4Q5VX71 490 aa15.95■□□□□ 0.14
SHROOM1-206ENST00000495680 C3orf67Q6ZVT6 689 aa15.95■□□□□ 0.14
SHROOM1-206ENST00000495680 CREBZFQ9NS37 354 aa15.95■□□□□ 0.14
SHROOM1-206ENST00000495680 ADAMTSL1Q8N6G6 1762 aa15.95■□□□□ 0.14
SHROOM1-206ENST00000495680 IQCA1LA6NCM1 817 aa15.94■□□□□ 0.14
SHROOM1-206ENST00000495680 NEFMP07197 916 aa15.94■□□□□ 0.14
SHROOM1-206ENST00000495680 ALDH1B1P30837 517 aa15.94■□□□□ 0.14
SHROOM1-206ENST00000495680 KIF6Q6ZMV9 814 aa15.94■□□□□ 0.14
SHROOM1-206ENST00000495680 LDHDQ86WU2 507 aa15.94■□□□□ 0.14
SHROOM1-206ENST00000495680 RTKN2Q8IZC4 609 aa15.94■□□□□ 0.14
SHROOM1-206ENST00000495680 TNS4Q8IZW8 715 aa15.94■□□□□ 0.14
SHROOM1-206ENST00000495680 RNF123Q5XPI4 1314 aa15.94■□□□□ 0.14
SHROOM1-206ENST00000495680 FZD9O00144 591 aa15.93■□□□□ 0.14
SHROOM1-206ENST00000495680 ITGBL1O95965 494 aaPredicted RBP15.93■□□□□ 0.14
SHROOM1-206ENST00000495680 EAPPQ56P03 285 aaPredicted RBP15.93■□□□□ 0.14
SHROOM1-206ENST00000495680 LRP10Q7Z4F1 713 aa15.93■□□□□ 0.14
SHROOM1-206ENST00000495680 NYXQ9GZU5 481 aa15.93■□□□□ 0.14
SHROOM1-206ENST00000495680 ANXA1P04083 346 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms