RNA–Protein interactions for RNA: ENST00000495532.1

HLA-DOA-206, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-206ENST00000495532 CNTROBQ8N137 903 aa15.53■□□□□ 0.08
HLA-DOA-206ENST00000495532 HACL1Q9UJ83 578 aa15.53■□□□□ 0.08
HLA-DOA-206ENST00000495532 CLEC11AQ9Y240 323 aa15.53■□□□□ 0.08
HLA-DOA-206ENST00000495532 C7orf43Q8WVR3 580 aa15.52■□□□□ 0.08
HLA-DOA-206ENST00000495532 TNRC18O15417 2968 aaPredicted RBP15.52■□□□□ 0.07
HLA-DOA-206ENST00000495532 TRPM7Q96QT4 1865 aa15.52■□□□□ 0.07
HLA-DOA-206ENST00000495532 RNF123Q5XPI4 1314 aa15.51■□□□□ 0.07
HLA-DOA-206ENST00000495532 A0A087WZG4 1122 aa15.51■□□□□ 0.07
HLA-DOA-206ENST00000495532 RNMTO43148 476 aaKnown RBP15.51■□□□□ 0.07
HLA-DOA-206ENST00000495532 ABT1Q9ULW3 272 aaKnown RBP15.51■□□□□ 0.07
HLA-DOA-206ENST00000495532 PNMA8AQ86V59 439 aaPredicted RBP15.5■□□□□ 0.07
HLA-DOA-206ENST00000495532 CNBD1Q8NA66 436 aa15.5■□□□□ 0.07
HLA-DOA-206ENST00000495532 MASTLQ96GX5 879 aa15.5■□□□□ 0.07
HLA-DOA-206ENST00000495532 CASP8AP2Q9UKL3 1982 aa15.49■□□□□ 0.07
HLA-DOA-206ENST00000495532 CCDC93Q567U6 631 aa15.49■□□□□ 0.07
HLA-DOA-206ENST00000495532 CAPNS2Q96L46 248 aa15.49■□□□□ 0.07
HLA-DOA-206ENST00000495532 DDX21Q9NR30 783 aaKnown RBP eCLIP15.49■□□□□ 0.07
HLA-DOA-206ENST00000495532 TBC1D2BQ9UPU7 963 aa15.49■□□□□ 0.07
HLA-DOA-206ENST00000495532 STARD3NLO95772 234 aa15.48■□□□□ 0.07
HLA-DOA-206ENST00000495532 IL13P35225 146 aa15.48■□□□□ 0.07
HLA-DOA-206ENST00000495532 FKBP4Q02790 459 aaKnown RBP eCLIP15.48■□□□□ 0.07
HLA-DOA-206ENST00000495532 ZNF277Q9NRM2 450 aaPredicted RBP15.48■□□□□ 0.07
HLA-DOA-206ENST00000495532 SIPA1L3O60292 1781 aaPredicted RBP15.47■□□□□ 0.07
HLA-DOA-206ENST00000495532 FZD9O00144 591 aa15.47■□□□□ 0.07
HLA-DOA-206ENST00000495532 ST5P78524 1137 aa15.47■□□□□ 0.07
HLA-DOA-206ENST00000495532 BEGAINQ9BUH8 593 aa15.47■□□□□ 0.07
HLA-DOA-206ENST00000495532 TSKSQ9UJT2 592 aa15.47■□□□□ 0.07
HLA-DOA-206ENST00000495532 FMR1Q06787 632 aaKnown RBP eCLIP15.46■□□□□ 0.07
HLA-DOA-206ENST00000495532 CYP4F22Q6NT55 531 aa15.46■□□□□ 0.07
HLA-DOA-206ENST00000495532 OLFM4Q6UX06 510 aa15.46■□□□□ 0.07
HLA-DOA-206ENST00000495532 GPR101Q96P66 508 aaPredicted RBP15.46■□□□□ 0.07
HLA-DOA-206ENST00000495532 SETDB2Q96T68 719 aa15.46■□□□□ 0.07
HLA-DOA-206ENST00000495532 MCOLN1Q9GZU1 580 aa15.46■□□□□ 0.07
HLA-DOA-206ENST00000495532 SNED1Q8TER0 1413 aa15.45■□□□□ 0.06
HLA-DOA-206ENST00000495532 CAMTA2O94983 1202 aa15.45■□□□□ 0.06
HLA-DOA-206ENST00000495532 IL6STP40189 918 aaPredicted RBP15.45■□□□□ 0.06
HLA-DOA-206ENST00000495532 ECE1P42892 770 aa15.45■□□□□ 0.06
HLA-DOA-206ENST00000495532 PAXIP1Q6ZW49 1069 aaPredicted RBP15.45■□□□□ 0.06
HLA-DOA-206ENST00000495532 GPC2Q8N158 579 aa15.45■□□□□ 0.06
HLA-DOA-206ENST00000495532 ZNF330Q9Y3S2 320 aaPredicted RBP15.45■□□□□ 0.06
HLA-DOA-206ENST00000495532 COL4A5P29400 1685 aa15.44■□□□□ 0.06
HLA-DOA-206ENST00000495532 NPHP1O15259 732 aa15.44■□□□□ 0.06
HLA-DOA-206ENST00000495532 GRM1Q13255 1194 aa15.44■□□□□ 0.06
HLA-DOA-206ENST00000495532 ZNF496Q96IT1 587 aaPredicted RBP15.44■□□□□ 0.06
HLA-DOA-206ENST00000495532 CFAP44Q96MT7 982 aa15.44■□□□□ 0.06
HLA-DOA-206ENST00000495532 HEG1Q9ULI3 1381 aa15.44■□□□□ 0.06
HLA-DOA-206ENST00000495532 IARSP41252 1262 aaKnown RBP15.43■□□□□ 0.06
HLA-DOA-206ENST00000495532 MTHFSDQ2M296 383 aaKnown RBP15.43■□□□□ 0.06
HLA-DOA-206ENST00000495532 CST9Q5W186 159 aa15.43■□□□□ 0.06
HLA-DOA-206ENST00000495532 TTC5Q8N0Z6 440 aa15.43■□□□□ 0.06
HLA-DOA-206ENST00000495532 KLRG2A4D1S0 409 aaPredicted RBP15.42■□□□□ 0.06
HLA-DOA-206ENST00000495532 AOC2O75106 756 aa15.42■□□□□ 0.06
HLA-DOA-206ENST00000495532 NPR1P16066 1061 aa15.42■□□□□ 0.06
HLA-DOA-206ENST00000495532 RTKN2Q8IZC4 609 aa15.42■□□□□ 0.06
HLA-DOA-206ENST00000495532 TLL2Q9Y6L7 1015 aa15.42■□□□□ 0.06
HLA-DOA-206ENST00000495532 MAP2K2P36507 400 aa15.41■□□□□ 0.06
HLA-DOA-206ENST00000495532 MORC1Q86VD1 984 aa15.41■□□□□ 0.06
HLA-DOA-206ENST00000495532 POLR3GLQ9BT43 218 aa15.41■□□□□ 0.06
HLA-DOA-206ENST00000495532 TRAF5O00463 557 aa15.4■□□□□ 0.06
HLA-DOA-206ENST00000495532 A1BGP04217 495 aa15.4■□□□□ 0.06
HLA-DOA-206ENST00000495532 HMOX1P09601 288 aa15.4■□□□□ 0.06
HLA-DOA-206ENST00000495532 SCNN1DP51172 638 aa15.4■□□□□ 0.06
HLA-DOA-206ENST00000495532 ZNF790Q6PG37 636 aa15.4■□□□□ 0.06
HLA-DOA-206ENST00000495532 SYNE4Q8N205 404 aa15.4■□□□□ 0.06
HLA-DOA-206ENST00000495532 TEX13AQ9BXU3 409 aaPredicted RBP15.4■□□□□ 0.06
HLA-DOA-206ENST00000495532 PANK3Q9H999 370 aa15.4■□□□□ 0.06
HLA-DOA-206ENST00000495532 CA12O43570 354 aa15.39■□□□□ 0.05
HLA-DOA-206ENST00000495532 NBPF5PQ86XG9 351 aaPredicted RBP15.39■□□□□ 0.05
HLA-DOA-206ENST00000495532 DZIP3Q86Y13 1208 aaKnown RBP15.39■□□□□ 0.05
HLA-DOA-206ENST00000495532 EPS15P42566 896 aa15.38■□□□□ 0.05
HLA-DOA-206ENST00000495532 DGKZQ13574 1117 aa15.38■□□□□ 0.05
HLA-DOA-206ENST00000495532 PSMD1Q99460 953 aa15.38■□□□□ 0.05
HLA-DOA-206ENST00000495532 GJA3Q9Y6H8 435 aa15.38■□□□□ 0.05
HLA-DOA-206ENST00000495532 LMOD1P29536 600 aaPredicted RBP15.37■□□□□ 0.05
HLA-DOA-206ENST00000495532 SAPCD2Q86UD0 394 aa15.37■□□□□ 0.05
HLA-DOA-206ENST00000495532 JDP2Q8WYK2 163 aa15.37■□□□□ 0.05
HLA-DOA-206ENST00000495532 BRPF1P55201 1214 aaPredicted RBP15.36■□□□□ 0.05
HLA-DOA-206ENST00000495532 EIF6P56537 245 aaKnown RBP15.36■□□□□ 0.05
HLA-DOA-206ENST00000495532 CLEC4GQ6UXB4 293 aa15.36■□□□□ 0.05
HLA-DOA-206ENST00000495532 USP50Q70EL3 339 aaPredicted RBP15.36■□□□□ 0.05
HLA-DOA-206ENST00000495532 NPM2Q86SE8 214 aaKnown RBP15.35■□□□□ 0.05
HLA-DOA-206ENST00000495532 IL17REQ8NFR9 667 aa15.35■□□□□ 0.05
HLA-DOA-206ENST00000495532 FMNL2Q96PY5 1086 aa15.35■□□□□ 0.05
HLA-DOA-206ENST00000495532 ALDH1B1P30837 517 aa15.34■□□□□ 0.05
HLA-DOA-206ENST00000495532 PIP4K2AP48426 406 aaPredicted RBP15.34■□□□□ 0.05
HLA-DOA-206ENST00000495532 TPTE2Q6XPS3 522 aa15.34■□□□□ 0.05
HLA-DOA-206ENST00000495532 HHIPL1Q96JK4 782 aa15.34■□□□□ 0.05
HLA-DOA-206ENST00000495532 TEFQ10587 303 aa15.33■□□□□ 0.04
HLA-DOA-206ENST00000495532 CIAPIN1Q6FI81 312 aa15.33■□□□□ 0.04
HLA-DOA-206ENST00000495532 ZNF652Q9Y2D9 606 aa15.33■□□□□ 0.04
HLA-DOA-206ENST00000495532 KCNQ3O43525 872 aa15.32■□□□□ 0.04
HLA-DOA-206ENST00000495532 CELF2O95319 508 aaKnown RBP15.32■□□□□ 0.04
HLA-DOA-206ENST00000495532 CRY2Q49AN0 593 aa15.32■□□□□ 0.04
HLA-DOA-206ENST00000495532 NIP7Q9Y221 180 aaKnown RBP eCLIP15.32■□□□□ 0.04
HLA-DOA-206ENST00000495532 SOX10P56693 466 aa15.31■□□□□ 0.04
HLA-DOA-206ENST00000495532 PRPF38BQ5VTL8 546 aaKnown RBP15.31■□□□□ 0.04
HLA-DOA-206ENST00000495532 ZIC5Q96T25 663 aa15.31■□□□□ 0.04
HLA-DOA-206ENST00000495532 USP16Q9Y5T5 823 aa15.31■□□□□ 0.04
HLA-DOA-206ENST00000495532 CEMIPQ8WUJ3 1361 aa15.31■□□□□ 0.04
HLA-DOA-206ENST00000495532 ABCC12Q96J65 1359 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms