RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 SLC4A2P04920 1241 aa21.93■■□□□ 1.1
HDAC6-235ENST00000495515 AIMP1Q12904 312 aaKnown RBP21.93■■□□□ 1.1
HDAC6-235ENST00000495515 CLEC4GQ6UXB4 293 aa21.93■■□□□ 1.1
HDAC6-235ENST00000495515 MAP3K15Q6ZN16 1313 aa21.92■■□□□ 1.1
HDAC6-235ENST00000495515 TCERG1O14776 1098 aaKnown RBP21.91■■□□□ 1.1
HDAC6-235ENST00000495515 DDX58O95786 925 aaKnown RBP21.91■■□□□ 1.1
HDAC6-235ENST00000495515 FKBP8Q14318 412 aa21.91■■□□□ 1.1
HDAC6-235ENST00000495515 TTLL7Q6ZT98 887 aa21.91■■□□□ 1.1
HDAC6-235ENST00000495515 C4AP0C0L4 1744 aa21.9■■□□□ 1.1
HDAC6-235ENST00000495515 BCL2L12Q9HB09 334 aa21.9■■□□□ 1.1
HDAC6-235ENST00000495515 ANKRD13DQ6ZTN6 518 aa21.89■■□□□ 1.09
HDAC6-235ENST00000495515 ZBTB3Q9H5J0 574 aa21.89■■□□□ 1.09
HDAC6-235ENST00000495515 MMP10P09238 476 aa21.88■■□□□ 1.09
HDAC6-235ENST00000495515 ALDH1L2Q3SY69 923 aa21.88■■□□□ 1.09
HDAC6-235ENST00000495515 HSP90AB3PQ58FF7 597 aa21.88■■□□□ 1.09
HDAC6-235ENST00000495515 PLBD2Q8NHP8 589 aa21.88■■□□□ 1.09
HDAC6-235ENST00000495515 PHAXQ9H814 394 aaKnown RBP21.88■■□□□ 1.09
HDAC6-235ENST00000495515 PARP3Q9Y6F1 533 aa21.88■■□□□ 1.09
HDAC6-235ENST00000495515 PTGER2P43116 358 aa21.87■■□□□ 1.09
HDAC6-235ENST00000495515 GIGYF2Q6Y7W6 1299 aaKnown RBP21.87■■□□□ 1.09
HDAC6-235ENST00000495515 SETDB2Q96T68 719 aa21.87■■□□□ 1.09
HDAC6-235ENST00000495515 PPP1R1BQ9UD71 204 aaPredicted RBP21.87■■□□□ 1.09
HDAC6-235ENST00000495515 TM4SF1P30408 202 aa21.86■■□□□ 1.09
HDAC6-235ENST00000495515 FLIIQ13045 1269 aa21.86■■□□□ 1.09
HDAC6-235ENST00000495515 RIC3Q7Z5B4 369 aa21.86■■□□□ 1.09
HDAC6-235ENST00000495515 SGIP1Q9BQI5 828 aa21.86■■□□□ 1.09
HDAC6-235ENST00000495515 NFIXQ14938 502 aa21.85■■□□□ 1.09
HDAC6-235ENST00000495515 HLFQ16534 295 aa21.85■■□□□ 1.09
HDAC6-235ENST00000495515 TBC1D9BQ66K14 1250 aa21.85■■□□□ 1.09
HDAC6-235ENST00000495515 BICDL1Q6ZP65 573 aa21.85■■□□□ 1.09
HDAC6-235ENST00000495515 SCN7AQ01118 1682 aa21.85■■□□□ 1.09
HDAC6-235ENST00000495515 FKBP5Q13451 457 aaPredicted RBP21.84■■□□□ 1.09
HDAC6-235ENST00000495515 SSH1Q8WYL5 1049 aa21.84■■□□□ 1.09
HDAC6-235ENST00000495515 SMC4Q9NTJ3 1288 aa21.84■■□□□ 1.09
HDAC6-235ENST00000495515 NIP7Q9Y221 180 aaKnown RBP eCLIP21.84■■□□□ 1.09
HDAC6-235ENST00000495515 KSR2Q6VAB6 950 aa21.83■■□□□ 1.09
HDAC6-235ENST00000495515 G2E3Q7L622 706 aa21.83■■□□□ 1.09
HDAC6-235ENST00000495515 MRPL50Q8N5N7 158 aaKnown RBP21.83■■□□□ 1.09
HDAC6-235ENST00000495515 CARMIL3Q8ND23 1372 aa21.83■■□□□ 1.08
HDAC6-235ENST00000495515 ATP10DQ9P241 1426 aa21.82■■□□□ 1.08
HDAC6-235ENST00000495515 POLRMTO00411 1230 aaKnown RBP21.81■■□□□ 1.08
HDAC6-235ENST00000495515 RARSP54136 660 aaKnown RBP21.81■■□□□ 1.08
HDAC6-235ENST00000495515 DDR1Q08345 913 aa21.81■■□□□ 1.08
HDAC6-235ENST00000495515 TCIRG1Q13488 830 aa21.81■■□□□ 1.08
HDAC6-235ENST00000495515 PARP10Q53GL7 1025 aa21.81■■□□□ 1.08
HDAC6-235ENST00000495515 BCORQ6W2J9 1755 aa21.81■■□□□ 1.08
HDAC6-235ENST00000495515 PI4KAP2A4QPH2 592 aa21.8■■□□□ 1.08
HDAC6-235ENST00000495515 NPHP1O15259 732 aa21.8■■□□□ 1.08
HDAC6-235ENST00000495515 SERPINB2P05120 415 aa21.8■■□□□ 1.08
HDAC6-235ENST00000495515 NEXNQ0ZGT2 675 aa21.8■■□□□ 1.08
HDAC6-235ENST00000495515 ZNF34Q8IZ26 560 aa21.8■■□□□ 1.08
HDAC6-235ENST00000495515 PI4KAP1Q8N8J0 262 aa21.8■■□□□ 1.08
HDAC6-235ENST00000495515 BCL2L13Q9BXK5 485 aa21.8■■□□□ 1.08
HDAC6-235ENST00000495515 PTPRCP08575 1304 aa21.8■■□□□ 1.08
HDAC6-235ENST00000495515 GPTP24298 496 aa21.79■■□□□ 1.08
HDAC6-235ENST00000495515 BRPF1P55201 1214 aaPredicted RBP21.79■■□□□ 1.08
HDAC6-235ENST00000495515 MAP3K2Q9Y2U5 619 aa21.79■■□□□ 1.08
HDAC6-235ENST00000495515 COL24A1Q17RW2 1714 aa21.79■■□□□ 1.08
HDAC6-235ENST00000495515 TPTE2Q6XPS3 522 aa21.78■■□□□ 1.08
HDAC6-235ENST00000495515 PPP1R42Q7Z4L9 355 aa21.78■■□□□ 1.08
HDAC6-235ENST00000495515 NBPF5PQ86XG9 351 aaPredicted RBP21.78■■□□□ 1.08
HDAC6-235ENST00000495515 METTL22Q9BUU2 404 aaPredicted RBP21.78■■□□□ 1.08
HDAC6-235ENST00000495515 NYXQ9GZU5 481 aa21.78■■□□□ 1.08
HDAC6-235ENST00000495515 CNBD1Q8NA66 436 aa21.77■■□□□ 1.08
HDAC6-235ENST00000495515 DNAAF4Q8WXU2 420 aa21.77■■□□□ 1.08
HDAC6-235ENST00000495515 KIF16BQ96L93 1317 aa21.77■■□□□ 1.07
HDAC6-235ENST00000495515 CACNA1FO60840 1977 aa21.76■■□□□ 1.07
HDAC6-235ENST00000495515 GTF2E1P29083 439 aaPredicted RBP21.76■■□□□ 1.07
HDAC6-235ENST00000495515 TRIM28Q13263 835 aaKnown RBP21.76■■□□□ 1.07
HDAC6-235ENST00000495515 KLHL34Q8N239 644 aa21.76■■□□□ 1.07
HDAC6-235ENST00000495515 MYD88Q99836 296 aa21.76■■□□□ 1.07
HDAC6-235ENST00000495515 ADCY9O60503 1353 aa21.75■■□□□ 1.07
HDAC6-235ENST00000495515 IPO8O15397 1037 aaKnown RBP21.75■■□□□ 1.07
HDAC6-235ENST00000495515 ST5P78524 1137 aa21.75■■□□□ 1.07
HDAC6-235ENST00000495515 ISCA1Q9BUE6 129 aa21.75■■□□□ 1.07
HDAC6-235ENST00000495515 CD2APQ9Y5K6 639 aa21.75■■□□□ 1.07
HDAC6-235ENST00000495515 IBTKQ9P2D0 1353 aaPredicted RBP21.74■■□□□ 1.07
HDAC6-235ENST00000495515 FAM177BA6PVY3 158 aa21.74■■□□□ 1.07
HDAC6-235ENST00000495515 NLRP10Q86W26 655 aa21.74■■□□□ 1.07
HDAC6-235ENST00000495515 UTP14AQ9BVJ6 771 aaKnown RBP21.74■■□□□ 1.07
HDAC6-235ENST00000495515 RNF123Q5XPI4 1314 aa21.74■■□□□ 1.07
HDAC6-235ENST00000495515 UBN2Q6ZU65 1347 aa21.74■■□□□ 1.07
HDAC6-235ENST00000495515 ATP5J2-PTCD1G3V325 749 aa21.73■■□□□ 1.07
HDAC6-235ENST00000495515 SUSD4Q5VX71 490 aa21.73■■□□□ 1.07
HDAC6-235ENST00000495515 PRR5LQ6MZQ0 368 aa21.73■■□□□ 1.07
HDAC6-235ENST00000495515 CCDC191Q8NCU4 936 aa21.73■■□□□ 1.07
HDAC6-235ENST00000495515 API5Q9BZZ5 524 aaKnown RBP21.73■■□□□ 1.07
HDAC6-235ENST00000495515 NOB1Q9ULX3 412 aaKnown RBP21.73■■□□□ 1.07
HDAC6-235ENST00000495515 ARHGAP45Q92619 1136 aa21.72■■□□□ 1.07
HDAC6-235ENST00000495515 FHDC1Q9C0D6 1143 aaPredicted RBP21.72■■□□□ 1.07
HDAC6-235ENST00000495515 NUP98P52948 1817 aa21.71■■□□□ 1.07
HDAC6-235ENST00000495515 F6X3S4 739 aa21.71■■□□□ 1.07
HDAC6-235ENST00000495515 BCAR3O75815 825 aa21.71■■□□□ 1.07
HDAC6-235ENST00000495515 LINS1Q8NG48 757 aa21.71■■□□□ 1.07
HDAC6-235ENST00000495515 CWC25Q9NXE8 425 aaPredicted RBP21.71■■□□□ 1.07
HDAC6-235ENST00000495515 TRMT112Q9UI30 125 aaKnown RBP21.71■■□□□ 1.07
HDAC6-235ENST00000495515 RCAN3Q9UKA8 241 aa21.71■■□□□ 1.07
HDAC6-235ENST00000495515 C10orf71Q711Q0 1435 aa21.71■■□□□ 1.07
HDAC6-235ENST00000495515 NTSR2O95665 410 aa21.7■■□□□ 1.06
HDAC6-235ENST00000495515 SLC4A10Q6U841 1118 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms