RNA–Protein interactions for RNA: ENST00000494954.1

PNKD-208, Transcript of PNKD, MBL domain containing, humanhuman

TSL 3

Gene PNKD, Length 248 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-208ENST00000494954 PNMA8AQ86V59 439 aaPredicted RBP8.08□□□□□ -1.12
PNKD-208ENST00000494954 NARFQ9UHQ1 456 aa8.08□□□□□ -1.12
PNKD-208ENST00000494954 SOS1Q07889 1333 aaPredicted RBP8.07□□□□□ -1.12
PNKD-208ENST00000494954 TTLL13PA6NNM8 815 aa8.07□□□□□ -1.12
PNKD-208ENST00000494954 NFIXQ14938 502 aa8.07□□□□□ -1.12
PNKD-208ENST00000494954 PRPF38BQ5VTL8 546 aaKnown RBP8.07□□□□□ -1.12
PNKD-208ENST00000494954 EYA1Q99502 592 aa8.07□□□□□ -1.12
PNKD-208ENST00000494954 MYH14Q7Z406 1995 aaKnown RBP8.07□□□□□ -1.12
PNKD-208ENST00000494954 SCN4AP35499 1836 aa8.07□□□□□ -1.12
PNKD-208ENST00000494954 H0YIN7 160 aa8.06□□□□□ -1.12
PNKD-208ENST00000494954 ECE1P42892 770 aa8.06□□□□□ -1.12
PNKD-208ENST00000494954 BRIP1Q9BX63 1249 aa8.06□□□□□ -1.12
PNKD-208ENST00000494954 SCUBE2Q9NQ36 999 aa8.06□□□□□ -1.12
PNKD-208ENST00000494954 SRP68Q9UHB9 627 aaKnown RBP8.06□□□□□ -1.12
PNKD-208ENST00000494954 DICER1Q9UPY3 1922 aaKnown RBP8.05□□□□□ -1.12
PNKD-208ENST00000494954 FER1L6Q2WGJ9 1857 aa8.05□□□□□ -1.12
PNKD-208ENST00000494954 AMOTQ4VCS5 1084 aa8.05□□□□□ -1.12
PNKD-208ENST00000494954 VSIG10Q8N0Z9 540 aa8.05□□□□□ -1.12
PNKD-208ENST00000494954 C7orf43Q8WVR3 580 aa8.05□□□□□ -1.12
PNKD-208ENST00000494954 CARD11Q9BXL7 1154 aa8.05□□□□□ -1.12
PNKD-208ENST00000494954 TAOK3Q9H2K8 898 aa8.05□□□□□ -1.12
PNKD-208ENST00000494954 BCL2L12Q9HB09 334 aa8.05□□□□□ -1.12
PNKD-208ENST00000494954 COLQQ9Y215 455 aaPredicted RBP8.05□□□□□ -1.12
PNKD-208ENST00000494954 PCDHB13Q9Y5F0 798 aa8.05□□□□□ -1.12
PNKD-208ENST00000494954 LTBP1Q14766 1721 aa8.05□□□□□ -1.12
PNKD-208ENST00000494954 TJP1Q07157 1748 aa8.04□□□□□ -1.12
PNKD-208ENST00000494954 KLRG2A4D1S0 409 aaPredicted RBP8.04□□□□□ -1.12
PNKD-208ENST00000494954 CCDC85CA6NKD9 419 aa8.04□□□□□ -1.12
PNKD-208ENST00000494954 RGL2O15211 777 aa8.04□□□□□ -1.12
PNKD-208ENST00000494954 ZPR1O75312 459 aa8.04□□□□□ -1.12
PNKD-208ENST00000494954 DDNO94850 711 aaPredicted RBP8.04□□□□□ -1.12
PNKD-208ENST00000494954 SERPINB2P05120 415 aa8.04□□□□□ -1.12
PNKD-208ENST00000494954 PDE6BP35913 854 aa8.04□□□□□ -1.12
PNKD-208ENST00000494954 BRPF1P55201 1214 aaPredicted RBP8.04□□□□□ -1.12
PNKD-208ENST00000494954 LCE2DQ5TA82 110 aaPredicted RBP8.04□□□□□ -1.12
PNKD-208ENST00000494954 STYK1Q6J9G0 422 aa8.04□□□□□ -1.12
PNKD-208ENST00000494954 C2CD5Q86YS7 1000 aa8.04□□□□□ -1.12
PNKD-208ENST00000494954 CNTROBQ8N137 903 aa8.04□□□□□ -1.12
PNKD-208ENST00000494954 GGNBP2Q9H3C7 697 aa8.04□□□□□ -1.12
PNKD-208ENST00000494954 ZBTB47Q9UFB7 747 aaPredicted RBP8.04□□□□□ -1.12
PNKD-208ENST00000494954 HACL1Q9UJ83 578 aa8.04□□□□□ -1.12
PNKD-208ENST00000494954 MRC1P22897 1456 aa8.03□□□□□ -1.12
PNKD-208ENST00000494954 COL15A1P39059 1388 aa8.03□□□□□ -1.12
PNKD-208ENST00000494954 FZD9O00144 591 aa8.03□□□□□ -1.12
PNKD-208ENST00000494954 CYP19A1P11511 503 aaPredicted RBP8.03□□□□□ -1.12
PNKD-208ENST00000494954 USPL1Q5W0Q7 1092 aa8.03□□□□□ -1.12
PNKD-208ENST00000494954 CNKSR1Q969H4 720 aa8.03□□□□□ -1.12
PNKD-208ENST00000494954 MCOLN1Q9GZU1 580 aa8.03□□□□□ -1.12
PNKD-208ENST00000494954 DDX21Q9NR30 783 aaKnown RBP eCLIP8.03□□□□□ -1.12
PNKD-208ENST00000494954 EMILIN1Q9Y6C2 1016 aa8.03□□□□□ -1.12
PNKD-208ENST00000494954 TLL2Q9Y6L7 1015 aa8.03□□□□□ -1.12
PNKD-208ENST00000494954 SNED1Q8TER0 1413 aa8.03□□□□□ -1.12
PNKD-208ENST00000494954 CARMIL3Q8ND23 1372 aa8.02□□□□□ -1.13
PNKD-208ENST00000494954 SEC24BO95487 1268 aa8.02□□□□□ -1.13
PNKD-208ENST00000494954 SRGNP10124 158 aa8.02□□□□□ -1.13
PNKD-208ENST00000494954 EPHX2P34913 555 aa8.02□□□□□ -1.13
PNKD-208ENST00000494954 CABP4P57796 275 aa8.02□□□□□ -1.13
PNKD-208ENST00000494954 IFNL1Q8IU54 200 aa8.02□□□□□ -1.13
PNKD-208ENST00000494954 GPC2Q8N158 579 aa8.02□□□□□ -1.13
PNKD-208ENST00000494954 FAM163AQ96GL9 167 aaPredicted RBP8.02□□□□□ -1.13
PNKD-208ENST00000494954 CAPNS2Q96L46 248 aa8.02□□□□□ -1.13
PNKD-208ENST00000494954 GPR101Q96P66 508 aaPredicted RBP8.02□□□□□ -1.13
PNKD-208ENST00000494954 BEGAINQ9BUH8 593 aa8.02□□□□□ -1.13
PNKD-208ENST00000494954 TRIM35Q9UPQ4 493 aa8.02□□□□□ -1.13
PNKD-208ENST00000494954 C21orf2O43822 256 aa8.01□□□□□ -1.13
PNKD-208ENST00000494954 PLEKHO1Q53GL0 409 aaPredicted RBP8.01□□□□□ -1.13
PNKD-208ENST00000494954 GCC1Q96CN9 775 aa8.01□□□□□ -1.13
PNKD-208ENST00000494954 SAGE1Q9NXZ1 904 aa8.01□□□□□ -1.13
PNKD-208ENST00000494954 POLKQ9UBT6 870 aa8.01□□□□□ -1.13
PNKD-208ENST00000494954 AFDNP55196 1824 aaKnown RBP8.01□□□□□ -1.13
PNKD-208ENST00000494954 EIF5P55010 431 aaKnown RBP8□□□□□ -1.13
PNKD-208ENST00000494954 CDCA8Q53HL2 280 aa8□□□□□ -1.13
PNKD-208ENST00000494954 PRPF40BQ6NWY9 871 aaKnown RBP8□□□□□ -1.13
PNKD-208ENST00000494954 A0A087WZG4 1122 aa7.99□□□□□ -1.13
PNKD-208ENST00000494954 PTCD1O75127 700 aaKnown RBP7.99□□□□□ -1.13
PNKD-208ENST00000494954 FKBP4Q02790 459 aaKnown RBP eCLIP7.99□□□□□ -1.13
PNKD-208ENST00000494954 EIF4A2Q14240 407 aaKnown RBP7.99□□□□□ -1.13
PNKD-208ENST00000494954 GRIPAP1Q4V328 841 aa7.99□□□□□ -1.13
PNKD-208ENST00000494954 CCDC93Q567U6 631 aa7.99□□□□□ -1.13
PNKD-208ENST00000494954 CST9Q5W186 159 aa7.99□□□□□ -1.13
PNKD-208ENST00000494954 PRR5LQ6MZQ0 368 aa7.99□□□□□ -1.13
PNKD-208ENST00000494954 SAPCD2Q86UD0 394 aa7.99□□□□□ -1.13
PNKD-208ENST00000494954 RTKN2Q8IZC4 609 aa7.99□□□□□ -1.13
PNKD-208ENST00000494954 NFATC2IPQ8NCF5 419 aa7.99□□□□□ -1.13
PNKD-208ENST00000494954 FAM212AQ96EL1 285 aa7.99□□□□□ -1.13
PNKD-208ENST00000494954 PSMD1Q99460 953 aa7.99□□□□□ -1.13
PNKD-208ENST00000494954 CARD14Q9BXL6 1004 aa7.99□□□□□ -1.13
PNKD-208ENST00000494954 PGAP2Q9UHJ9 254 aa7.99□□□□□ -1.13
PNKD-208ENST00000494954 ARFGEF2Q9Y6D5 1785 aa7.99□□□□□ -1.13
PNKD-208ENST00000494954 ST20-MTHFSA0A0A6YYL1 179 aa7.98□□□□□ -1.13
PNKD-208ENST00000494954 MTHFSP49914 203 aa7.98□□□□□ -1.13
PNKD-208ENST00000494954 USP50Q70EL3 339 aaPredicted RBP7.98□□□□□ -1.13
PNKD-208ENST00000494954 MASTLQ96GX5 879 aa7.98□□□□□ -1.13
PNKD-208ENST00000494954 CDHR2Q9BYE9 1310 aa7.98□□□□□ -1.13
PNKD-208ENST00000494954 KIF20BQ96Q89 1820 aa7.97□□□□□ -1.13
PNKD-208ENST00000494954 NOGQ13253 232 aa7.97□□□□□ -1.13
PNKD-208ENST00000494954 IER5LQ5T953 404 aa7.97□□□□□ -1.13
PNKD-208ENST00000494954 MAP1SQ66K74 1059 aaPredicted RBP7.97□□□□□ -1.13
PNKD-208ENST00000494954 DNAJC10Q8IXB1 793 aa7.97□□□□□ -1.13
PNKD-208ENST00000494954 TMEM106CQ9BVX2 250 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms