RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 ZNF652Q9Y2D9 606 aa18.68■□□□□ 0.58
SCAP-213ENST00000494938 MAP3K15Q6ZN16 1313 aa18.68■□□□□ 0.58
SCAP-213ENST00000494938 GRIN3BO60391 1043 aa18.67■□□□□ 0.58
SCAP-213ENST00000494938 CHRNA5P30532 468 aa18.67■□□□□ 0.58
SCAP-213ENST00000494938 PRR5LQ6MZQ0 368 aa18.67■□□□□ 0.58
SCAP-213ENST00000494938 DDX21Q9NR30 783 aaKnown RBP eCLIP18.67■□□□□ 0.58
SCAP-213ENST00000494938 IL16Q14005 1332 aa18.67■□□□□ 0.58
SCAP-213ENST00000494938 CCER2I3L3R5 266 aa18.66■□□□□ 0.58
SCAP-213ENST00000494938 ELL2O00472 640 aaPredicted RBP18.66■□□□□ 0.58
SCAP-213ENST00000494938 HDGFL1Q5TGJ6 251 aa18.66■□□□□ 0.58
SCAP-213ENST00000494938 COPS6Q7L5N1 327 aa18.66■□□□□ 0.58
SCAP-213ENST00000494938 WDR63Q8IWG1 891 aa18.66■□□□□ 0.58
SCAP-213ENST00000494938 CCDC24Q8N4L8 307 aa18.66■□□□□ 0.58
SCAP-213ENST00000494938 TSR2Q969E8 191 aaKnown RBP18.66■□□□□ 0.58
SCAP-213ENST00000494938 CHPF2Q9P2E5 772 aa18.66■□□□□ 0.58
SCAP-213ENST00000494938 NIP7Q9Y221 180 aaKnown RBP eCLIP18.66■□□□□ 0.58
SCAP-213ENST00000494938 CARMIL3Q8ND23 1372 aa18.66■□□□□ 0.58
SCAP-213ENST00000494938 KIF6Q6ZMV9 814 aa18.65■□□□□ 0.58
SCAP-213ENST00000494938 TSPYL6Q8N831 410 aa18.65■□□□□ 0.58
SCAP-213ENST00000494938 XAGE3Q8WTP9 111 aa18.65■□□□□ 0.58
SCAP-213ENST00000494938 BRIP1Q9BX63 1249 aa18.65■□□□□ 0.58
SCAP-213ENST00000494938 ZBTB3Q9H5J0 574 aa18.65■□□□□ 0.58
SCAP-213ENST00000494938 PIM2Q9P1W9 311 aa18.64■□□□□ 0.57
SCAP-213ENST00000494938 YY1P25490 414 aa18.63■□□□□ 0.57
SCAP-213ENST00000494938 AIMP1Q12904 312 aaKnown RBP18.63■□□□□ 0.57
SCAP-213ENST00000494938 GIGYF2Q6Y7W6 1299 aaKnown RBP18.63■□□□□ 0.57
SCAP-213ENST00000494938 ZNF34Q8IZ26 560 aa18.63■□□□□ 0.57
SCAP-213ENST00000494938 SPINK5Q9NQ38 1064 aaPredicted RBP18.63■□□□□ 0.57
SCAP-213ENST00000494938 DBF4Q9UBU7 674 aaPredicted RBP18.63■□□□□ 0.57
SCAP-213ENST00000494938 DIEXFQ68CQ4 756 aaKnown RBP18.62■□□□□ 0.57
SCAP-213ENST00000494938 NBPF5PQ86XG9 351 aaPredicted RBP18.62■□□□□ 0.57
SCAP-213ENST00000494938 C2CD5Q86YS7 1000 aa18.62■□□□□ 0.57
SCAP-213ENST00000494938 CNBD1Q8NA66 436 aa18.62■□□□□ 0.57
SCAP-213ENST00000494938 BCS1LQ9Y276 419 aa18.62■□□□□ 0.57
SCAP-213ENST00000494938 TPTE2Q6XPS3 522 aa18.61■□□□□ 0.57
SCAP-213ENST00000494938 FAM177BA6PVY3 158 aa18.6■□□□□ 0.57
SCAP-213ENST00000494938 H0YIN7 160 aa18.6■□□□□ 0.57
SCAP-213ENST00000494938 GPTP24298 496 aa18.6■□□□□ 0.57
SCAP-213ENST00000494938 PDE6BP35913 854 aa18.6■□□□□ 0.57
SCAP-213ENST00000494938 DALRD3Q5D0E6 543 aaKnown RBP18.6■□□□□ 0.57
SCAP-213ENST00000494938 MIER1Q8N108 512 aa18.6■□□□□ 0.57
SCAP-213ENST00000494938 HYPKQ9NX55 129 aa18.6■□□□□ 0.57
SCAP-213ENST00000494938 KIF13BQ9NQT8 1826 aa18.6■□□□□ 0.57
SCAP-213ENST00000494938 LAMB4A4D0S4 1761 aa18.6■□□□□ 0.57
SCAP-213ENST00000494938 SCN7AQ01118 1682 aa18.6■□□□□ 0.57
SCAP-213ENST00000494938 UBN2Q6ZU65 1347 aa18.59■□□□□ 0.57
SCAP-213ENST00000494938 ZNF521Q96K83 1311 aa18.59■□□□□ 0.57
SCAP-213ENST00000494938 ST5P78524 1137 aa18.59■□□□□ 0.57
SCAP-213ENST00000494938 SUSD4Q5VX71 490 aa18.59■□□□□ 0.57
SCAP-213ENST00000494938 NRXN2Q9P2S2 1712 aa18.59■□□□□ 0.57
SCAP-213ENST00000494938 KIAA1551Q9HCM1 1747 aa18.58■□□□□ 0.57
SCAP-213ENST00000494938 KLRG2A4D1S0 409 aaPredicted RBP18.58■□□□□ 0.56
SCAP-213ENST00000494938 ANKRD13DQ6ZTN6 518 aa18.58■□□□□ 0.56
SCAP-213ENST00000494938 PDZRN3Q9UPQ7 1066 aa18.58■□□□□ 0.56
SCAP-213ENST00000494938 ATP10DQ9P241 1426 aa18.57■□□□□ 0.56
SCAP-213ENST00000494938 FANCIQ9NVI1 1328 aa18.57■□□□□ 0.56
SCAP-213ENST00000494938 NPHP1O15259 732 aa18.57■□□□□ 0.56
SCAP-213ENST00000494938 TCIRG1Q13488 830 aa18.57■□□□□ 0.56
SCAP-213ENST00000494938 CCDC30Q5VVM6 783 aa18.57■□□□□ 0.56
SCAP-213ENST00000494938 PHAXQ9H814 394 aaKnown RBP18.57■□□□□ 0.56
SCAP-213ENST00000494938 SRGNP10124 158 aa18.56■□□□□ 0.56
SCAP-213ENST00000494938 TWISTNBQ3B726 338 aaPredicted RBP18.56■□□□□ 0.56
SCAP-213ENST00000494938 ERFEQ4G0M1 354 aa18.56■□□□□ 0.56
SCAP-213ENST00000494938 NUTM1Q86Y26 1132 aa18.56■□□□□ 0.56
SCAP-213ENST00000494938 TTLL6Q8N841 843 aa18.56■□□□□ 0.56
SCAP-213ENST00000494938 PLBD2Q8NHP8 589 aa18.56■□□□□ 0.56
SCAP-213ENST00000494938 NYXQ9GZU5 481 aa18.56■□□□□ 0.56
SCAP-213ENST00000494938 VAMP4O75379 141 aa18.55■□□□□ 0.56
SCAP-213ENST00000494938 EXOSC9Q06265 439 aaKnown RBP18.55■□□□□ 0.56
SCAP-213ENST00000494938 GOLGA2Q08379 1002 aa18.55■□□□□ 0.56
SCAP-213ENST00000494938 ARHGAP27Q6ZUM4 889 aa18.55■□□□□ 0.56
SCAP-213ENST00000494938 ZNF622Q969S3 477 aaKnown RBP eCLIP18.55■□□□□ 0.56
SCAP-213ENST00000494938 CHMP4AQ9BY43 222 aa18.55■□□□□ 0.56
SCAP-213ENST00000494938 BCORQ6W2J9 1755 aa18.55■□□□□ 0.56
SCAP-213ENST00000494938 AFDNP55196 1824 aaKnown RBP18.54■□□□□ 0.56
SCAP-213ENST00000494938 TCERG1O14776 1098 aaKnown RBP18.54■□□□□ 0.56
SCAP-213ENST00000494938 NTSR2O95665 410 aa18.54■□□□□ 0.56
SCAP-213ENST00000494938 GTF2E1P29083 439 aaPredicted RBP18.54■□□□□ 0.56
SCAP-213ENST00000494938 PARP10Q53GL7 1025 aa18.54■□□□□ 0.56
SCAP-213ENST00000494938 HSP90AB3PQ58FF7 597 aa18.54■□□□□ 0.56
SCAP-213ENST00000494938 NLRP10Q86W26 655 aa18.54■□□□□ 0.56
SCAP-213ENST00000494938 N4BP2Q86UW6 1770 aaPredicted RBP18.53■□□□□ 0.56
SCAP-213ENST00000494938 STYK1Q6J9G0 422 aa18.53■□□□□ 0.56
SCAP-213ENST00000494938 PPP1R42Q7Z4L9 355 aa18.53■□□□□ 0.56
SCAP-213ENST00000494938 MASTLQ96GX5 879 aa18.53■□□□□ 0.56
SCAP-213ENST00000494938 ISCA1Q9BUE6 129 aa18.53■□□□□ 0.56
SCAP-213ENST00000494938 UTP14AQ9BVJ6 771 aaKnown RBP18.53■□□□□ 0.56
SCAP-213ENST00000494938 SLC10A5Q5PT55 438 aa18.52■□□□□ 0.56
SCAP-213ENST00000494938 MYH16Q9H6N6 1097 aa18.52■□□□□ 0.56
SCAP-213ENST00000494938 SYNE4Q8N205 404 aa18.51■□□□□ 0.55
SCAP-213ENST00000494938 ABCC12Q96J65 1359 aa18.51■□□□□ 0.55
SCAP-213ENST00000494938 IBTKQ9P2D0 1353 aaPredicted RBP18.51■□□□□ 0.55
SCAP-213ENST00000494938 ATP5J2-PTCD1G3V325 749 aa18.5■□□□□ 0.55
SCAP-213ENST00000494938 SLC4A2P04920 1241 aa18.5■□□□□ 0.55
SCAP-213ENST00000494938 NPR1P16066 1061 aa18.5■□□□□ 0.55
SCAP-213ENST00000494938 TRIM28Q13263 835 aaKnown RBP18.5■□□□□ 0.55
SCAP-213ENST00000494938 CRY2Q49AN0 593 aa18.5■□□□□ 0.55
SCAP-213ENST00000494938 C3orf67Q6ZVT6 689 aa18.5■□□□□ 0.55
SCAP-213ENST00000494938 G2E3Q7L622 706 aa18.5■□□□□ 0.55
SCAP-213ENST00000494938 RIC3Q7Z5B4 369 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms