RNA–Protein interactions for RNA: ENST00000494872.5

TRIM2-209, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 2,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-209ENST00000494872 KCNH5Q8NCM2 988 aa14.26□□□□□ -0.13
TRIM2-209ENST00000494872 SMC3Q9UQE7 1217 aa14.26□□□□□ -0.13
TRIM2-209ENST00000494872 CRYBG1Q9Y4K1 1723 aa14.26□□□□□ -0.13
TRIM2-209ENST00000494872 USP42Q9H9J4 1324 aaKnown RBP14.25□□□□□ -0.13
TRIM2-209ENST00000494872 KDM4AO75164 1064 aa14.25□□□□□ -0.13
TRIM2-209ENST00000494872 NBPF6Q5VWK0 638 aa14.25□□□□□ -0.13
TRIM2-209ENST00000494872 PPP1R42Q7Z4L9 355 aa14.25□□□□□ -0.13
TRIM2-209ENST00000494872 NBPF4Q96M43 638 aa14.25□□□□□ -0.13
TRIM2-209ENST00000494872 SPTLC3Q9NUV7 552 aa14.25□□□□□ -0.13
TRIM2-209ENST00000494872 MED1Q15648 1581 aaPredicted RBP14.25□□□□□ -0.13
TRIM2-209ENST00000494872 TPM3P06753 285 aa14.25□□□□□ -0.13
TRIM2-209ENST00000494872 RUFY3Q7L099 469 aa14.25□□□□□ -0.13
TRIM2-209ENST00000494872 FUCA2Q9BTY2 467 aa14.25□□□□□ -0.13
TRIM2-209ENST00000494872 NFAT5O94916 1531 aa14.24□□□□□ -0.13
TRIM2-209ENST00000494872 TTC41PQ6P2S7 1318 aa14.24□□□□□ -0.13
TRIM2-209ENST00000494872 LTN1O94822 1766 aa14.24□□□□□ -0.13
TRIM2-209ENST00000494872 PDIA4P13667 645 aaKnown RBP14.24□□□□□ -0.13
TRIM2-209ENST00000494872 HCLS1P14317 486 aaPredicted RBP14.24□□□□□ -0.13
TRIM2-209ENST00000494872 EIF2S2P20042 333 aaKnown RBP14.24□□□□□ -0.13
TRIM2-209ENST00000494872 SMAP1Q8IYB5 467 aaPredicted RBP14.24□□□□□ -0.13
TRIM2-209ENST00000494872 ZSCAN31Q96LW9 406 aaPredicted RBP14.24□□□□□ -0.13
TRIM2-209ENST00000494872 LGR6Q9HBX8 967 aa14.24□□□□□ -0.13
TRIM2-209ENST00000494872 PSME1Q06323 249 aa14.23□□□□□ -0.13
TRIM2-209ENST00000494872 ANKLE2Q86XL3 938 aa14.23□□□□□ -0.13
TRIM2-209ENST00000494872 RUFY2Q8WXA3 655 aa14.23□□□□□ -0.13
TRIM2-209ENST00000494872 SH2B1Q9NRF2 756 aaPredicted RBP14.23□□□□□ -0.13
TRIM2-209ENST00000494872 PLEKHO1Q53GL0 409 aaPredicted RBP14.23□□□□□ -0.13
TRIM2-209ENST00000494872 AKAP4Q5JQC9 854 aa14.23□□□□□ -0.13
TRIM2-209ENST00000494872 RASEFQ8IZ41 740 aa14.23□□□□□ -0.13
TRIM2-209ENST00000494872 TM6SF1Q9BZW5 370 aa14.23□□□□□ -0.13
TRIM2-209ENST00000494872 GLRX3O76003 335 aaKnown RBP14.22□□□□□ -0.13
TRIM2-209ENST00000494872 BEND3Q5T5X7 828 aa14.22□□□□□ -0.13
TRIM2-209ENST00000494872 VPS53Q5VIR6 699 aa14.22□□□□□ -0.13
TRIM2-209ENST00000494872 DNAAF4Q8WXU2 420 aa14.22□□□□□ -0.13
TRIM2-209ENST00000494872 ADGRL3Q9HAR2 1447 aa14.22□□□□□ -0.13
TRIM2-209ENST00000494872 SRGAP3O43295 1099 aa14.22□□□□□ -0.13
TRIM2-209ENST00000494872 TEFQ10587 303 aa14.22□□□□□ -0.13
TRIM2-209ENST00000494872 KCNB2Q92953 911 aa14.22□□□□□ -0.13
TRIM2-209ENST00000494872 CCDC94Q9BW85 323 aaPredicted RBP14.22□□□□□ -0.13
TRIM2-209ENST00000494872 HYPKQ9NX55 129 aa14.22□□□□□ -0.13
TRIM2-209ENST00000494872 CHPF2Q9P2E5 772 aa14.22□□□□□ -0.13
TRIM2-209ENST00000494872 CHD2O14647 1828 aaKnown RBP14.22□□□□□ -0.13
TRIM2-209ENST00000494872 MAP4K4O95819 1239 aaPredicted RBP14.21□□□□□ -0.13
TRIM2-209ENST00000494872 AMOTQ4VCS5 1084 aa14.21□□□□□ -0.13
TRIM2-209ENST00000494872 ESCO1Q5FWF5 840 aa14.21□□□□□ -0.13
TRIM2-209ENST00000494872 KDM3BQ7LBC6 1761 aa14.21□□□□□ -0.13
TRIM2-209ENST00000494872 BTBD11A6QL63 1104 aa14.21□□□□□ -0.14
TRIM2-209ENST00000494872 FIBPO43427 364 aa14.21□□□□□ -0.14
TRIM2-209ENST00000494872 CASTP20810 708 aaKnown RBP14.21□□□□□ -0.14
TRIM2-209ENST00000494872 ZNF530Q6P9A1 599 aaPredicted RBP14.21□□□□□ -0.14
TRIM2-209ENST00000494872 ZNF830Q96NB3 372 aaPredicted RBP14.21□□□□□ -0.14
TRIM2-209ENST00000494872 TTC12Q9H892 705 aaPredicted RBP14.21□□□□□ -0.14
TRIM2-209ENST00000494872 ZBTB7CA1YPR0 619 aa14.2□□□□□ -0.14
TRIM2-209ENST00000494872 PI4KAP2A4QPH2 592 aa14.2□□□□□ -0.14
TRIM2-209ENST00000494872 GJB2P29033 226 aa14.2□□□□□ -0.14
TRIM2-209ENST00000494872 CWC27Q6UX04 472 aaKnown RBP14.2□□□□□ -0.14
TRIM2-209ENST00000494872 PI4KAP1Q8N8J0 262 aa14.2□□□□□ -0.14
TRIM2-209ENST00000494872 DIAPH3Q9NSV4 1193 aa14.2□□□□□ -0.14
TRIM2-209ENST00000494872 MTMR6Q9Y217 621 aa14.2□□□□□ -0.14
TRIM2-209ENST00000494872 PHRF1Q9P1Y6 1649 aaKnown RBP14.19□□□□□ -0.14
TRIM2-209ENST00000494872 GOLGA6L6A8MZA4 724 aa14.19□□□□□ -0.14
TRIM2-209ENST00000494872 KCNQ3O43525 872 aa14.19□□□□□ -0.14
TRIM2-209ENST00000494872 NBPF7P0C2Y1 421 aaPredicted RBP14.19□□□□□ -0.14
TRIM2-209ENST00000494872 ZSWIM6Q9HCJ5 1215 aa14.19□□□□□ -0.14
TRIM2-209ENST00000494872 PDRG1Q9NUG6 133 aa14.19□□□□□ -0.14
TRIM2-209ENST00000494872 LMO7Q8WWI1 1683 aa14.19□□□□□ -0.14
TRIM2-209ENST00000494872 CCDC192P0DO97 292 aa14.19□□□□□ -0.14
TRIM2-209ENST00000494872 CYP46A1Q9Y6A2 500 aa14.19□□□□□ -0.14
TRIM2-209ENST00000494872 RNMTO43148 476 aaKnown RBP14.18□□□□□ -0.14
TRIM2-209ENST00000494872 MTX1Q13505 466 aa14.18□□□□□ -0.14
TRIM2-209ENST00000494872 GIMAP6Q6P9H5 292 aa14.18□□□□□ -0.14
TRIM2-209ENST00000494872 DBF4Q9UBU7 674 aaPredicted RBP14.18□□□□□ -0.14
TRIM2-209ENST00000494872 KIF3AQ9Y496 699 aa14.18□□□□□ -0.14
TRIM2-209ENST00000494872 NCAPD2Q15021 1401 aa14.18□□□□□ -0.14
TRIM2-209ENST00000494872 LARGE1O95461 756 aa14.18□□□□□ -0.14
TRIM2-209ENST00000494872 DNM1Q05193 864 aaKnown RBP14.18□□□□□ -0.14
TRIM2-209ENST00000494872 MPRIPQ6WCQ1 1025 aa14.18□□□□□ -0.14
TRIM2-209ENST00000494872 CCDC83Q8IWF9 413 aa14.18□□□□□ -0.14
TRIM2-209ENST00000494872 KIAA1524Q8TCG1 905 aa14.18□□□□□ -0.14
TRIM2-209ENST00000494872 LRRC59Q96AG4 307 aaKnown RBP14.18□□□□□ -0.14
TRIM2-209ENST00000494872 GPATCH3Q96I76 525 aa14.18□□□□□ -0.14
TRIM2-209ENST00000494872 SPG7Q9UQ90 795 aa14.18□□□□□ -0.14
TRIM2-209ENST00000494872 OVOS2A0A0G2JMS6 1433 aa14.17□□□□□ -0.14
TRIM2-209ENST00000494872 ADCY9O60503 1353 aa14.17□□□□□ -0.14
TRIM2-209ENST00000494872 ELP1O95163 1332 aa14.17□□□□□ -0.14
TRIM2-209ENST00000494872 CCDC171Q6TFL3 1326 aa14.17□□□□□ -0.14
TRIM2-209ENST00000494872 C1orf141Q5JVX7 400 aa14.17□□□□□ -0.14
TRIM2-209ENST00000494872 CLASRPQ8N2M8 674 aaKnown RBP14.17□□□□□ -0.14
TRIM2-209ENST00000494872 RBM33Q96EV2 1170 aaKnown RBP14.17□□□□□ -0.14
TRIM2-209ENST00000494872 JAKMIP1Q96N16 626 aaKnown RBP14.17□□□□□ -0.14
TRIM2-209ENST00000494872 PRDM4Q9UKN5 801 aa14.17□□□□□ -0.14
TRIM2-209ENST00000494872 HDAC5Q9UQL6 1122 aa14.17□□□□□ -0.14
TRIM2-209ENST00000494872 ALDH1L1O75891 902 aa14.17□□□□□ -0.14
TRIM2-209ENST00000494872 ECHDC1Q9NTX5 307 aa14.17□□□□□ -0.14
TRIM2-209ENST00000494872 GCP02774 474 aa14.16□□□□□ -0.14
TRIM2-209ENST00000494872 ZKSCAN1P17029 563 aaPredicted RBP14.16□□□□□ -0.14
TRIM2-209ENST00000494872 NECTIN1Q15223 517 aa14.16□□□□□ -0.14
TRIM2-209ENST00000494872 ARHGEF25Q86VW2 580 aa14.16□□□□□ -0.14
TRIM2-209ENST00000494872 ERC1Q8IUD2 1116 aa14.16□□□□□ -0.14
TRIM2-209ENST00000494872 MPNDQ8N594 471 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms