RNA–Protein interactions for RNA: ENST00000494746.1

CALCA-206, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best)

Gene CALCA, Length 1,837 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-206ENST00000494746 COPS6Q7L5N1 327 aa12.31□□□□□ -0.44
CALCA-206ENST00000494746 COL23A1Q86Y22 540 aaPredicted RBP12.31□□□□□ -0.44
CALCA-206ENST00000494746 TBC1D2BQ9UPU7 963 aa12.31□□□□□ -0.44
CALCA-206ENST00000494746 NUP98P52948 1817 aa12.31□□□□□ -0.44
CALCA-206ENST00000494746 UTRNP46939 3433 aa12.31□□□□□ -0.44
CALCA-206ENST00000494746 ARXQ96QS3 562 aa12.3□□□□□ -0.44
CALCA-206ENST00000494746 SRP68Q9UHB9 627 aaKnown RBP12.3□□□□□ -0.44
CALCA-206ENST00000494746 RCAN3Q9UKA8 241 aa12.3□□□□□ -0.44
CALCA-206ENST00000494746 PSDA5PKW4 1024 aaPredicted RBP12.3□□□□□ -0.44
CALCA-206ENST00000494746 NPM2Q86SE8 214 aaKnown RBP12.3□□□□□ -0.44
CALCA-206ENST00000494746 DZIP3Q86Y13 1208 aaKnown RBP12.3□□□□□ -0.44
CALCA-206ENST00000494746 USP42Q9H9J4 1324 aaKnown RBP12.3□□□□□ -0.44
CALCA-206ENST00000494746 CAMTA2O94983 1202 aa12.29□□□□□ -0.44
CALCA-206ENST00000494746 RFC4P35249 363 aa12.29□□□□□ -0.44
CALCA-206ENST00000494746 ZBTB3Q9H5J0 574 aa12.29□□□□□ -0.44
CALCA-206ENST00000494746 ANKRD36CQ5JPF3 1778 aa12.28□□□□□ -0.44
CALCA-206ENST00000494746 ADCY9O60503 1353 aa12.28□□□□□ -0.44
CALCA-206ENST00000494746 A0A087WZG4 1122 aa12.28□□□□□ -0.44
CALCA-206ENST00000494746 MSH5O43196 834 aa12.28□□□□□ -0.44
CALCA-206ENST00000494746 BRPF1P55201 1214 aaPredicted RBP12.28□□□□□ -0.44
CALCA-206ENST00000494746 FKBP5Q13451 457 aaPredicted RBP12.28□□□□□ -0.44
CALCA-206ENST00000494746 FKBP8Q14318 412 aa12.28□□□□□ -0.44
CALCA-206ENST00000494746 KIF6Q6ZMV9 814 aa12.28□□□□□ -0.44
CALCA-206ENST00000494746 FLAD1Q8NFF5 587 aa12.28□□□□□ -0.44
CALCA-206ENST00000494746 NARFQ9UHQ1 456 aa12.28□□□□□ -0.44
CALCA-206ENST00000494746 MAP3K15Q6ZN16 1313 aa12.28□□□□□ -0.44
CALCA-206ENST00000494746 HLFQ16534 295 aa12.27□□□□□ -0.44
CALCA-206ENST00000494746 USPL1Q5W0Q7 1092 aa12.27□□□□□ -0.44
CALCA-206ENST00000494746 BCL2L12Q9HB09 334 aa12.27□□□□□ -0.44
CALCA-206ENST00000494746 NOB1Q9ULX3 412 aaKnown RBP12.27□□□□□ -0.44
CALCA-206ENST00000494746 KIF16BQ96L93 1317 aa12.27□□□□□ -0.45
CALCA-206ENST00000494746 PI4KAP2A4QPH2 592 aa12.27□□□□□ -0.45
CALCA-206ENST00000494746 ZPR1O75312 459 aa12.27□□□□□ -0.45
CALCA-206ENST00000494746 GYS1P13807 737 aa12.27□□□□□ -0.45
CALCA-206ENST00000494746 ANKRD13DQ6ZTN6 518 aa12.27□□□□□ -0.45
CALCA-206ENST00000494746 PI4KAP1Q8N8J0 262 aa12.27□□□□□ -0.45
CALCA-206ENST00000494746 N4BP2Q86UW6 1770 aaPredicted RBP12.26□□□□□ -0.45
CALCA-206ENST00000494746 PTPRCP08575 1304 aa12.26□□□□□ -0.45
CALCA-206ENST00000494746 F6X3S4 739 aa12.26□□□□□ -0.45
CALCA-206ENST00000494746 PLBD2Q8NHP8 589 aa12.26□□□□□ -0.45
CALCA-206ENST00000494746 FRAT1Q92837 279 aaPredicted RBP12.26□□□□□ -0.45
CALCA-206ENST00000494746 AFDNP55196 1824 aaKnown RBP12.26□□□□□ -0.45
CALCA-206ENST00000494746 ERVV-1B6SEH8 477 aa12.25□□□□□ -0.45
CALCA-206ENST00000494746 DDX58O95786 925 aaKnown RBP12.25□□□□□ -0.45
CALCA-206ENST00000494746 TNNQ9UQP3 1299 aa12.25□□□□□ -0.45
CALCA-206ENST00000494746 MAP3K2Q9Y2U5 619 aa12.25□□□□□ -0.45
CALCA-206ENST00000494746 COL24A1Q17RW2 1714 aa12.25□□□□□ -0.45
CALCA-206ENST00000494746 TRIM27P14373 513 aa12.25□□□□□ -0.45
CALCA-206ENST00000494746 MSL1Q68DK7 614 aa12.25□□□□□ -0.45
CALCA-206ENST00000494746 KSR2Q6VAB6 950 aa12.25□□□□□ -0.45
CALCA-206ENST00000494746 RIC3Q7Z5B4 369 aa12.25□□□□□ -0.45
CALCA-206ENST00000494746 ATP10DQ9P241 1426 aa12.25□□□□□ -0.45
CALCA-206ENST00000494746 PLIN1O60240 522 aa12.24□□□□□ -0.45
CALCA-206ENST00000494746 ZBTB7AO95365 584 aa12.24□□□□□ -0.45
CALCA-206ENST00000494746 GIGYF2Q6Y7W6 1299 aaKnown RBP12.24□□□□□ -0.45
CALCA-206ENST00000494746 TBC1D9BQ66K14 1250 aa12.23□□□□□ -0.45
CALCA-206ENST00000494746 CLEC4GQ6UXB4 293 aa12.23□□□□□ -0.45
CALCA-206ENST00000494746 ATF7IPQ6VMQ6 1270 aa12.23□□□□□ -0.45
CALCA-206ENST00000494746 DNAAF4Q8WXU2 420 aa12.23□□□□□ -0.45
CALCA-206ENST00000494746 ARHGAP45Q92619 1136 aa12.23□□□□□ -0.45
CALCA-206ENST00000494746 ZNF652Q9Y2D9 606 aa12.23□□□□□ -0.45
CALCA-206ENST00000494746 PXDNLA1KZ92 1463 aa12.23□□□□□ -0.45
CALCA-206ENST00000494746 ATP5J2-PTCD1G3V325 749 aa12.23□□□□□ -0.45
CALCA-206ENST00000494746 RGL2O15211 777 aa12.23□□□□□ -0.45
CALCA-206ENST00000494746 GPTP24298 496 aa12.23□□□□□ -0.45
CALCA-206ENST00000494746 ZKSCAN2Q63HK3 967 aa12.23□□□□□ -0.45
CALCA-206ENST00000494746 METTL22Q9BUU2 404 aaPredicted RBP12.23□□□□□ -0.45
CALCA-206ENST00000494746 UBN2Q6ZU65 1347 aa12.22□□□□□ -0.45
CALCA-206ENST00000494746 NFIXQ14938 502 aa12.22□□□□□ -0.45
CALCA-206ENST00000494746 SLC4A10Q6U841 1118 aa12.22□□□□□ -0.45
CALCA-206ENST00000494746 BICDL1Q6ZP65 573 aa12.22□□□□□ -0.45
CALCA-206ENST00000494746 CLUAP1Q96AJ1 413 aa12.22□□□□□ -0.45
CALCA-206ENST00000494746 MYD88Q99836 296 aa12.22□□□□□ -0.45
CALCA-206ENST00000494746 ABCC4O15439 1325 aa12.22□□□□□ -0.45
CALCA-206ENST00000494746 IPO8O15397 1037 aaKnown RBP12.21□□□□□ -0.45
CALCA-206ENST00000494746 IGKV5-2P06315 115 aa12.21□□□□□ -0.45
CALCA-206ENST00000494746 RLBP1P12271 317 aa12.21□□□□□ -0.45
CALCA-206ENST00000494746 TCIRG1Q13488 830 aa12.21□□□□□ -0.45
CALCA-206ENST00000494746 CWF19L2Q2TBE0 894 aaKnown RBP12.21□□□□□ -0.45
CALCA-206ENST00000494746 ZNF34Q8IZ26 560 aa12.21□□□□□ -0.45
CALCA-206ENST00000494746 SLC16A10Q8TF71 515 aa12.21□□□□□ -0.45
CALCA-206ENST00000494746 API5Q9BZZ5 524 aaKnown RBP12.21□□□□□ -0.45
CALCA-206ENST00000494746 MTFR1LQ9H019 292 aa12.21□□□□□ -0.45
CALCA-206ENST00000494746 NIP7Q9Y221 180 aaKnown RBP eCLIP12.21□□□□□ -0.45
CALCA-206ENST00000494746 RRP1P56182 461 aaKnown RBP12.21□□□□□ -0.46
CALCA-206ENST00000494746 DDR1Q08345 913 aa12.21□□□□□ -0.46
CALCA-206ENST00000494746 HSP90AB3PQ58FF7 597 aa12.21□□□□□ -0.46
CALCA-206ENST00000494746 BEND3Q5T5X7 828 aa12.21□□□□□ -0.46
CALCA-206ENST00000494746 NLGN1Q8N2Q7 840 aa12.21□□□□□ -0.46
CALCA-206ENST00000494746 ISCA1Q9BUE6 129 aa12.21□□□□□ -0.46
CALCA-206ENST00000494746 NRXN2Q9P2S2 1712 aa12.2□□□□□ -0.46
CALCA-206ENST00000494746 CARMIL3Q8ND23 1372 aa12.2□□□□□ -0.46
CALCA-206ENST00000494746 MMP10P09238 476 aa12.2□□□□□ -0.46
CALCA-206ENST00000494746 TM4SF1P30408 202 aa12.2□□□□□ -0.46
CALCA-206ENST00000494746 ATF5Q9Y2D1 282 aaPredicted RBP12.2□□□□□ -0.46
CALCA-206ENST00000494746 RNF123Q5XPI4 1314 aa12.19□□□□□ -0.46
CALCA-206ENST00000494746 NEURL1BA8MQ27 555 aa12.19□□□□□ -0.46
CALCA-206ENST00000494746 POLRMTO00411 1230 aaKnown RBP12.19□□□□□ -0.46
CALCA-206ENST00000494746 NEXNQ0ZGT2 675 aa12.19□□□□□ -0.46
CALCA-206ENST00000494746 C20orf194Q5TEA3 1177 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms