RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 VRTNQ9H8Y1 702 aa9.31□□□□□ -0.92
CCDC66-222ENST00000494672 AVENQ9NQS1 362 aaPredicted RBP9.31□□□□□ -0.92
CCDC66-222ENST00000494672 MKL2Q9ULH7 1088 aa9.31□□□□□ -0.92
CCDC66-222ENST00000494672 HCN4Q9Y3Q4 1203 aa9.31□□□□□ -0.92
CCDC66-222ENST00000494672 ATAD2Q6PL18 1390 aa9.3□□□□□ -0.92
CCDC66-222ENST00000494672 PPP1R12BO60237 982 aaPredicted RBP9.3□□□□□ -0.92
CCDC66-222ENST00000494672 DKK1O94907 266 aa9.3□□□□□ -0.92
CCDC66-222ENST00000494672 ADH6P28332 368 aa9.3□□□□□ -0.92
CCDC66-222ENST00000494672 LMOD1P29536 600 aaPredicted RBP9.3□□□□□ -0.92
CCDC66-222ENST00000494672 HIRAP54198 1017 aaPredicted RBP9.3□□□□□ -0.92
CCDC66-222ENST00000494672 SH3PXD2AQ5TCZ1 1133 aa9.3□□□□□ -0.92
CCDC66-222ENST00000494672 GAS2L2Q8NHY3 880 aa9.3□□□□□ -0.92
CCDC66-222ENST00000494672 ANKIB1Q9P2G1 1089 aa9.3□□□□□ -0.92
CCDC66-222ENST00000494672 EFSO43281 561 aa9.29□□□□□ -0.92
CCDC66-222ENST00000494672 EPXP11678 715 aa9.29□□□□□ -0.92
CCDC66-222ENST00000494672 BTBD6Q96KE9 485 aa9.29□□□□□ -0.92
CCDC66-222ENST00000494672 HINFPQ9BQA5 517 aa9.29□□□□□ -0.92
CCDC66-222ENST00000494672 PIK3R2O00459 728 aa9.28□□□□□ -0.92
CCDC66-222ENST00000494672 SNRPNP63162 240 aaKnown RBP9.28□□□□□ -0.92
CCDC66-222ENST00000494672 POTEAQ6S8J7 498 aa9.28□□□□□ -0.92
CCDC66-222ENST00000494672 STAG2Q8N3U4 1231 aa9.28□□□□□ -0.92
CCDC66-222ENST00000494672 PHACTR1Q9C0D0 580 aa9.28□□□□□ -0.92
CCDC66-222ENST00000494672 ZNF777Q9ULD5 760 aaPredicted RBP9.28□□□□□ -0.92
CCDC66-222ENST00000494672 IGHA1P01876 353 aa9.27□□□□□ -0.93
CCDC66-222ENST00000494672 KANK4Q5T7N3 995 aaPredicted RBP9.27□□□□□ -0.93
CCDC66-222ENST00000494672 SCG3Q8WXD2 468 aaKnown RBP9.27□□□□□ -0.93
CCDC66-222ENST00000494672 DCAF5Q96JK2 942 aa9.27□□□□□ -0.93
CCDC66-222ENST00000494672 STRN4Q9NRL3 753 aa9.27□□□□□ -0.93
CCDC66-222ENST00000494672 HCN2Q9UL51 889 aa9.27□□□□□ -0.93
CCDC66-222ENST00000494672 FAM196BA6NMK8 535 aa9.26□□□□□ -0.93
CCDC66-222ENST00000494672 PCBP4P57723 403 aaKnown RBP9.26□□□□□ -0.93
CCDC66-222ENST00000494672 DPYDQ12882 1025 aa9.26□□□□□ -0.93
CCDC66-222ENST00000494672 PTK7Q13308 1070 aa9.26□□□□□ -0.93
CCDC66-222ENST00000494672 ZNF468Q5VIY5 522 aaPredicted RBP9.26□□□□□ -0.93
CCDC66-222ENST00000494672 GPAT2Q6NUI2 795 aa9.26□□□□□ -0.93
CCDC66-222ENST00000494672 CHMP7Q8WUX9 453 aaPredicted RBP9.26□□□□□ -0.93
CCDC66-222ENST00000494672 C21orf2O43822 256 aa9.25□□□□□ -0.93
CCDC66-222ENST00000494672 CRTC2Q53ET0 693 aaPredicted RBP9.25□□□□□ -0.93
CCDC66-222ENST00000494672 ANKMY2Q8IV38 441 aa9.25□□□□□ -0.93
CCDC66-222ENST00000494672 ALDH16A1Q8IZ83 802 aa9.25□□□□□ -0.93
CCDC66-222ENST00000494672 C2orf49Q9BVC5 232 aaPredicted RBP9.25□□□□□ -0.93
CCDC66-222ENST00000494672 KLF15Q9UIH9 416 aa9.25□□□□□ -0.93
CCDC66-222ENST00000494672 USP17L15C9J2P7 530 aa9.24□□□□□ -0.93
CCDC66-222ENST00000494672 USP17L10C9JJH3 530 aa9.24□□□□□ -0.93
CCDC66-222ENST00000494672 USP17L13C9JLJ4 530 aa9.24□□□□□ -0.93
CCDC66-222ENST00000494672 USP17L12C9JPN9 530 aa9.24□□□□□ -0.93
CCDC66-222ENST00000494672 USP17L11C9JVI0 530 aa9.24□□□□□ -0.93
CCDC66-222ENST00000494672 USP17L21D6R901 530 aa9.24□□□□□ -0.93
CCDC66-222ENST00000494672 USP17L18D6R9N7 530 aa9.24□□□□□ -0.93
CCDC66-222ENST00000494672 USP17L22D6RA61 530 aa9.24□□□□□ -0.93
CCDC66-222ENST00000494672 USP17L17D6RBQ6 530 aa9.24□□□□□ -0.93
CCDC66-222ENST00000494672 USP17L19D6RCP7 530 aa9.24□□□□□ -0.93
CCDC66-222ENST00000494672 USP17L20D6RJB6 530 aa9.24□□□□□ -0.93
CCDC66-222ENST00000494672 USP17L24Q0WX57 530 aa9.24□□□□□ -0.93
CCDC66-222ENST00000494672 HIF1AQ16665 826 aa9.24□□□□□ -0.93
CCDC66-222ENST00000494672 CEP63Q96MT8 703 aa9.24□□□□□ -0.93
CCDC66-222ENST00000494672 SFSWAPQ12872 951 aaKnown RBP9.23□□□□□ -0.93
CCDC66-222ENST00000494672 LINC00114Q6XXX2 140 aa9.23□□□□□ -0.93
CCDC66-222ENST00000494672 ALYREFQ86V81 257 aaKnown RBP9.23□□□□□ -0.93
CCDC66-222ENST00000494672 FCHSD1Q86WN1 690 aa9.23□□□□□ -0.93
CCDC66-222ENST00000494672 ALAS2P22557 587 aa9.22□□□□□ -0.93
CCDC66-222ENST00000494672 NEUROD1Q13562 356 aa9.22□□□□□ -0.93
CCDC66-222ENST00000494672 CHSY3Q70JA7 882 aa9.22□□□□□ -0.93
CCDC66-222ENST00000494672 SYT9Q86SS6 491 aa9.22□□□□□ -0.93
CCDC66-222ENST00000494672 HSH2DQ96JZ2 352 aa9.22□□□□□ -0.93
CCDC66-222ENST00000494672 SUSD3Q96L08 255 aa9.22□□□□□ -0.93
CCDC66-222ENST00000494672 BRD7Q9NPI1 651 aa9.22□□□□□ -0.93
CCDC66-222ENST00000494672 GNB5O14775 395 aa9.21□□□□□ -0.94
CCDC66-222ENST00000494672 HOXB4P17483 251 aaPredicted RBP9.21□□□□□ -0.94
CCDC66-222ENST00000494672 ZNF280CQ8ND82 737 aa9.21□□□□□ -0.94
CCDC66-222ENST00000494672 NGLY1Q96IV0 654 aa9.21□□□□□ -0.94
CCDC66-222ENST00000494672 RFX1P22670 979 aa9.2□□□□□ -0.94
CCDC66-222ENST00000494672 IGFBP4P22692 258 aa9.2□□□□□ -0.94
CCDC66-222ENST00000494672 PLA2G4EQ3MJ16 856 aa9.2□□□□□ -0.94
CCDC66-222ENST00000494672 CFAP70Q5T0N1 1121 aa9.2□□□□□ -0.94
CCDC66-222ENST00000494672 KCNH4Q9UQ05 1017 aa9.2□□□□□ -0.94
CCDC66-222ENST00000494672 ELOA3CA0A087WX78 387 aaPredicted RBP9.19□□□□□ -0.94
CCDC66-222ENST00000494672 ELOA3DA6NLF2 546 aaPredicted RBP9.19□□□□□ -0.94
CCDC66-222ENST00000494672 SIN3BO75182 1162 aa9.19□□□□□ -0.94
CCDC66-222ENST00000494672 DGKGP49619 791 aa9.19□□□□□ -0.94
CCDC66-222ENST00000494672 KCNQ4P56696 695 aa9.19□□□□□ -0.94
CCDC66-222ENST00000494672 SPEM2Q0P670 501 aa9.19□□□□□ -0.94
CCDC66-222ENST00000494672 ELOA3BQ3SY89 546 aa9.19□□□□□ -0.94
CCDC66-222ENST00000494672 ELOA3Q8NG57 546 aa9.19□□□□□ -0.94
CCDC66-222ENST00000494672 FAM200AQ8TCP9 573 aa9.19□□□□□ -0.94
CCDC66-222ENST00000494672 SLC30A3Q99726 388 aa9.19□□□□□ -0.94
CCDC66-222ENST00000494672 MSTNO14793 375 aa9.18□□□□□ -0.94
CCDC66-222ENST00000494672 LGR5O75473 907 aa9.18□□□□□ -0.94
CCDC66-222ENST00000494672 GRIN2CQ14957 1233 aa9.18□□□□□ -0.94
CCDC66-222ENST00000494672 RTN1Q16799 776 aa9.18□□□□□ -0.94
CCDC66-222ENST00000494672 NOP53Q9NZM5 478 aaKnown RBP9.18□□□□□ -0.94
CCDC66-222ENST00000494672 COL8A1P27658 744 aa9.17□□□□□ -0.94
CCDC66-222ENST00000494672 TYRO3Q06418 890 aa9.17□□□□□ -0.94
CCDC66-222ENST00000494672 CDCA8Q53HL2 280 aa9.17□□□□□ -0.94
CCDC66-222ENST00000494672 BTLAQ7Z6A9 289 aa9.17□□□□□ -0.94
CCDC66-222ENST00000494672 ADARB2-AS1A8MUL3 147 aa9.16□□□□□ -0.94
CCDC66-222ENST00000494672 VTI1AQ96AJ9 217 aa9.16□□□□□ -0.94
CCDC66-222ENST00000494672 ARXQ96QS3 562 aa9.16□□□□□ -0.94
CCDC66-222ENST00000494672 SUV39H2Q9H5I1 410 aa9.16□□□□□ -0.94
CCDC66-222ENST00000494672 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms