RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 NLGN1Q8N2Q7 840 aa14.35□□□□□ -0.11
APTX-230ENST00000494649 FAM177BA6PVY3 158 aa14.34□□□□□ -0.11
APTX-230ENST00000494649 HOXB7P09629 217 aa14.34□□□□□ -0.11
APTX-230ENST00000494649 CCDC24Q8N4L8 307 aa14.34□□□□□ -0.11
APTX-230ENST00000494649 DDX21Q9NR30 783 aaKnown RBP eCLIP14.34□□□□□ -0.11
APTX-230ENST00000494649 DBF4Q9UBU7 674 aaPredicted RBP14.34□□□□□ -0.11
APTX-230ENST00000494649 WWC3Q9ULE0 1092 aa14.34□□□□□ -0.11
APTX-230ENST00000494649 VAMP4O75379 141 aa14.34□□□□□ -0.11
APTX-230ENST00000494649 DDR1Q08345 913 aa14.34□□□□□ -0.11
APTX-230ENST00000494649 NFIXQ14938 502 aa14.34□□□□□ -0.11
APTX-230ENST00000494649 KIF6Q6ZMV9 814 aa14.34□□□□□ -0.11
APTX-230ENST00000494649 FHDC1Q9C0D6 1143 aaPredicted RBP14.34□□□□□ -0.11
APTX-230ENST00000494649 CCDC30Q5VVM6 783 aa14.33□□□□□ -0.12
APTX-230ENST00000494649 LRP5O75197 1615 aa14.33□□□□□ -0.12
APTX-230ENST00000494649 GPTP24298 496 aa14.32□□□□□ -0.12
APTX-230ENST00000494649 BCL2L13Q9BXK5 485 aa14.32□□□□□ -0.12
APTX-230ENST00000494649 ERBB4Q15303 1308 aa14.32□□□□□ -0.12
APTX-230ENST00000494649 SLC4A2P04920 1241 aa14.32□□□□□ -0.12
APTX-230ENST00000494649 PARP3Q9Y6F1 533 aa14.32□□□□□ -0.12
APTX-230ENST00000494649 G2E3Q7L622 706 aa14.31□□□□□ -0.12
APTX-230ENST00000494649 STK31Q9BXU1 1019 aa14.31□□□□□ -0.12
APTX-230ENST00000494649 MAP3K15Q6ZN16 1313 aa14.31□□□□□ -0.12
APTX-230ENST00000494649 SCN7AQ01118 1682 aa14.31□□□□□ -0.12
APTX-230ENST00000494649 POLRMTO00411 1230 aaKnown RBP14.3□□□□□ -0.12
APTX-230ENST00000494649 NIP7Q9Y221 180 aaKnown RBP eCLIP14.3□□□□□ -0.12
APTX-230ENST00000494649 TM4SF1P30408 202 aa14.3□□□□□ -0.12
APTX-230ENST00000494649 HYPKQ9NX55 129 aa14.3□□□□□ -0.12
APTX-230ENST00000494649 NPHP1O15259 732 aa14.29□□□□□ -0.12
APTX-230ENST00000494649 NLGN2Q8NFZ4 835 aa14.29□□□□□ -0.12
APTX-230ENST00000494649 SETDB2Q96T68 719 aa14.29□□□□□ -0.12
APTX-230ENST00000494649 BCORQ6W2J9 1755 aa14.29□□□□□ -0.12
APTX-230ENST00000494649 ZBED9Q6R2W3 1325 aa14.29□□□□□ -0.12
APTX-230ENST00000494649 SERPINB2P05120 415 aa14.29□□□□□ -0.12
APTX-230ENST00000494649 ZNF652Q9Y2D9 606 aa14.29□□□□□ -0.12
APTX-230ENST00000494649 TRMT2AQ8IZ69 625 aaKnown RBP14.28□□□□□ -0.12
APTX-230ENST00000494649 SYT17Q9BSW7 474 aa14.28□□□□□ -0.12
APTX-230ENST00000494649 ATP5J2-PTCD1G3V325 749 aa14.27□□□□□ -0.12
APTX-230ENST00000494649 ANKRD13DQ6ZTN6 518 aa14.27□□□□□ -0.12
APTX-230ENST00000494649 RIC3Q7Z5B4 369 aa14.27□□□□□ -0.12
APTX-230ENST00000494649 COL24A1Q17RW2 1714 aa14.27□□□□□ -0.13
APTX-230ENST00000494649 GIGYF2Q6Y7W6 1299 aaKnown RBP14.27□□□□□ -0.13
APTX-230ENST00000494649 UBN2Q6ZU65 1347 aa14.27□□□□□ -0.13
APTX-230ENST00000494649 CARMIL3Q8ND23 1372 aa14.27□□□□□ -0.13
APTX-230ENST00000494649 ERVV-1B6SEH8 477 aa14.26□□□□□ -0.13
APTX-230ENST00000494649 CLEC4GQ6UXB4 293 aa14.26□□□□□ -0.13
APTX-230ENST00000494649 NUTM1Q86Y26 1132 aa14.26□□□□□ -0.13
APTX-230ENST00000494649 NUP98P52948 1817 aa14.26□□□□□ -0.13
APTX-230ENST00000494649 FLIIQ13045 1269 aa14.26□□□□□ -0.13
APTX-230ENST00000494649 FKBP5Q13451 457 aaPredicted RBP14.26□□□□□ -0.13
APTX-230ENST00000494649 RTL5Q5HYW3 569 aaPredicted RBP14.26□□□□□ -0.13
APTX-230ENST00000494649 NBPF5PQ86XG9 351 aaPredicted RBP14.26□□□□□ -0.13
APTX-230ENST00000494649 PELP1Q8IZL8 1130 aaKnown RBP14.26□□□□□ -0.13
APTX-230ENST00000494649 PLBD2Q8NHP8 589 aa14.26□□□□□ -0.13
APTX-230ENST00000494649 PI4KAP2A4QPH2 592 aa14.25□□□□□ -0.13
APTX-230ENST00000494649 PI4KAP1Q8N8J0 262 aa14.25□□□□□ -0.13
APTX-230ENST00000494649 SSH1Q8WYL5 1049 aa14.25□□□□□ -0.13
APTX-230ENST00000494649 MAP3K2Q9Y2U5 619 aa14.25□□□□□ -0.13
APTX-230ENST00000494649 F6X3S4 739 aa14.24□□□□□ -0.13
APTX-230ENST00000494649 SUSD4Q5VX71 490 aa14.24□□□□□ -0.13
APTX-230ENST00000494649 PRR5LQ6MZQ0 368 aa14.24□□□□□ -0.13
APTX-230ENST00000494649 CNBD1Q8NA66 436 aa14.24□□□□□ -0.13
APTX-230ENST00000494649 MYD88Q99836 296 aa14.24□□□□□ -0.13
APTX-230ENST00000494649 AFDNP55196 1824 aaKnown RBP14.24□□□□□ -0.13
APTX-230ENST00000494649 A0A0G2JLW4 131 aa14.24□□□□□ -0.13
APTX-230ENST00000494649 GTF2E1P29083 439 aaPredicted RBP14.24□□□□□ -0.13
APTX-230ENST00000494649 CHRNA5P30532 468 aa14.23□□□□□ -0.13
APTX-230ENST00000494649 SYNE4Q8N205 404 aa14.23□□□□□ -0.13
APTX-230ENST00000494649 JARID2Q92833 1246 aaPredicted RBP14.23□□□□□ -0.13
APTX-230ENST00000494649 SMC4Q9NTJ3 1288 aa14.23□□□□□ -0.13
APTX-230ENST00000494649 ADCY9O60503 1353 aa14.23□□□□□ -0.13
APTX-230ENST00000494649 DDX58O95786 925 aaKnown RBP14.22□□□□□ -0.13
APTX-230ENST00000494649 TCIRG1Q13488 830 aa14.22□□□□□ -0.13
APTX-230ENST00000494649 ZNF34Q8IZ26 560 aa14.22□□□□□ -0.13
APTX-230ENST00000494649 CHMP4AQ9BY43 222 aa14.22□□□□□ -0.13
APTX-230ENST00000494649 MRPL50Q8N5N7 158 aaKnown RBP14.22□□□□□ -0.13
APTX-230ENST00000494649 C10orf71Q711Q0 1435 aa14.22□□□□□ -0.13
APTX-230ENST00000494649 ATP10DQ9P241 1426 aa14.22□□□□□ -0.13
APTX-230ENST00000494649 ARFGEF2Q9Y6D5 1785 aa14.22□□□□□ -0.13
APTX-230ENST00000494649 CWF19L2Q2TBE0 894 aaKnown RBP14.21□□□□□ -0.13
APTX-230ENST00000494649 ERFEQ4G0M1 354 aa14.21□□□□□ -0.13
APTX-230ENST00000494649 KSR2Q6VAB6 950 aa14.21□□□□□ -0.13
APTX-230ENST00000494649 CD2APQ9Y5K6 639 aa14.21□□□□□ -0.13
APTX-230ENST00000494649 DPEP1P16444 411 aa14.21□□□□□ -0.14
APTX-230ENST00000494649 SLC4A10Q6U841 1118 aa14.21□□□□□ -0.14
APTX-230ENST00000494649 TPTE2Q6XPS3 522 aa14.21□□□□□ -0.14
APTX-230ENST00000494649 NLRP10Q86W26 655 aa14.21□□□□□ -0.14
APTX-230ENST00000494649 ABCC12Q96J65 1359 aa14.2□□□□□ -0.14
APTX-230ENST00000494649 N4BP2Q86UW6 1770 aaPredicted RBP14.2□□□□□ -0.14
APTX-230ENST00000494649 BCAR3O75815 825 aa14.2□□□□□ -0.14
APTX-230ENST00000494649 ST5P78524 1137 aa14.2□□□□□ -0.14
APTX-230ENST00000494649 NTSR2O95665 410 aa14.19□□□□□ -0.14
APTX-230ENST00000494649 RARSP54136 660 aaKnown RBP14.19□□□□□ -0.14
APTX-230ENST00000494649 HSP90AB3PQ58FF7 597 aa14.19□□□□□ -0.14
APTX-230ENST00000494649 FAM89AQ96GI7 184 aa14.19□□□□□ -0.14
APTX-230ENST00000494649 METTL22Q9BUU2 404 aaPredicted RBP14.19□□□□□ -0.14
APTX-230ENST00000494649 TRMT112Q9UI30 125 aaKnown RBP14.19□□□□□ -0.14
APTX-230ENST00000494649 UTP14AQ9BVJ6 771 aaKnown RBP14.19□□□□□ -0.14
APTX-230ENST00000494649 PXDNLA1KZ92 1463 aa14.19□□□□□ -0.14
APTX-230ENST00000494649 NRXN2Q9P2S2 1712 aa14.18□□□□□ -0.14
APTX-230ENST00000494649 IGKV5-2P06315 115 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms