RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 COL15A1P39059 1388 aa15.37■□□□□ 0.05
TRIM59-206ENST00000494486 CELF2O95319 508 aaKnown RBP15.37■□□□□ 0.05
TRIM59-206ENST00000494486 SRGNP10124 158 aa15.37■□□□□ 0.05
TRIM59-206ENST00000494486 AKAP4Q5JQC9 854 aa15.37■□□□□ 0.05
TRIM59-206ENST00000494486 HPS5Q9UPZ3 1129 aa15.37■□□□□ 0.05
TRIM59-206ENST00000494486 PRR5LQ6MZQ0 368 aa15.36■□□□□ 0.05
TRIM59-206ENST00000494486 DNAJC10Q8IXB1 793 aa15.36■□□□□ 0.05
TRIM59-206ENST00000494486 EMILIN1Q9Y6C2 1016 aa15.36■□□□□ 0.05
TRIM59-206ENST00000494486 CYP19A1P11511 503 aaPredicted RBP15.35■□□□□ 0.05
TRIM59-206ENST00000494486 PKN2Q16513 984 aaKnown RBP15.35■□□□□ 0.05
TRIM59-206ENST00000494486 RTKN2Q8IZC4 609 aa15.35■□□□□ 0.05
TRIM59-206ENST00000494486 NFATC2IPQ8NCF5 419 aa15.35■□□□□ 0.05
TRIM59-206ENST00000494486 IARSP41252 1262 aaKnown RBP15.34■□□□□ 0.05
TRIM59-206ENST00000494486 PLEKHO1Q53GL0 409 aaPredicted RBP15.34■□□□□ 0.05
TRIM59-206ENST00000494486 WASHC2AQ641Q2 1341 aa15.34■□□□□ 0.05
TRIM59-206ENST00000494486 ST20-MTHFSA0A0A6YYL1 179 aa15.33■□□□□ 0.04
TRIM59-206ENST00000494486 PPM1GO15355 546 aaPredicted RBP15.33■□□□□ 0.04
TRIM59-206ENST00000494486 EPS15P42566 896 aa15.33■□□□□ 0.04
TRIM59-206ENST00000494486 MTHFSP49914 203 aa15.33■□□□□ 0.04
TRIM59-206ENST00000494486 EIF6P56537 245 aaKnown RBP15.33■□□□□ 0.04
TRIM59-206ENST00000494486 CCDC24Q8N4L8 307 aa15.33■□□□□ 0.04
TRIM59-206ENST00000494486 JDP2Q8WYK2 163 aa15.33■□□□□ 0.04
TRIM59-206ENST00000494486 ZIC5Q96T25 663 aa15.33■□□□□ 0.04
TRIM59-206ENST00000494486 GJA3Q9Y6H8 435 aa15.33■□□□□ 0.04
TRIM59-206ENST00000494486 TBC1D9BQ66K14 1250 aa15.32■□□□□ 0.04
TRIM59-206ENST00000494486 SLC17A8Q8NDX2 589 aa15.32■□□□□ 0.04
TRIM59-206ENST00000494486 ZBTB1Q9Y2K1 713 aa15.32■□□□□ 0.04
TRIM59-206ENST00000494486 A0A087WZG4 1122 aa15.31■□□□□ 0.04
TRIM59-206ENST00000494486 SCNN1DP51172 638 aa15.31■□□□□ 0.04
TRIM59-206ENST00000494486 AMOTQ4VCS5 1084 aa15.31■□□□□ 0.04
TRIM59-206ENST00000494486 SYNE4Q8N205 404 aa15.31■□□□□ 0.04
TRIM59-206ENST00000494486 CARD11Q9BXL7 1154 aa15.31■□□□□ 0.04
TRIM59-206ENST00000494486 RNF186Q9NXI6 227 aa15.31■□□□□ 0.04
TRIM59-206ENST00000494486 TJP1Q07157 1748 aa15.31■□□□□ 0.04
TRIM59-206ENST00000494486 SLX4Q8IY92 1834 aa15.31■□□□□ 0.04
TRIM59-206ENST00000494486 NPHP1O15259 732 aa15.3■□□□□ 0.04
TRIM59-206ENST00000494486 TRPA1O75762 1119 aa15.3■□□□□ 0.04
TRIM59-206ENST00000494486 ST5P78524 1137 aa15.3■□□□□ 0.04
TRIM59-206ENST00000494486 ZNF530Q6P9A1 599 aaPredicted RBP15.3■□□□□ 0.04
TRIM59-206ENST00000494486 CNBD1Q8NA66 436 aa15.3■□□□□ 0.04
TRIM59-206ENST00000494486 TRPM7Q96QT4 1865 aa15.3■□□□□ 0.04
TRIM59-206ENST00000494486 SLC24A1O60721 1099 aa15.29■□□□□ 0.04
TRIM59-206ENST00000494486 ANKRD31Q8N7Z5 1873 aa15.29■□□□□ 0.04
TRIM59-206ENST00000494486 NPR1P16066 1061 aa15.28■□□□□ 0.04
TRIM59-206ENST00000494486 C1orf141Q5JVX7 400 aa15.28■□□□□ 0.04
TRIM59-206ENST00000494486 ZNF408Q9H9D4 720 aa15.28■□□□□ 0.04
TRIM59-206ENST00000494486 ADARB2Q9NS39 739 aaKnown RBP15.28■□□□□ 0.04
TRIM59-206ENST00000494486 COL11A2P13942 1736 aaPredicted RBP15.28■□□□□ 0.04
TRIM59-206ENST00000494486 CANXP27824 592 aaKnown RBP15.27■□□□□ 0.04
TRIM59-206ENST00000494486 EIF5P55010 431 aaKnown RBP15.27■□□□□ 0.04
TRIM59-206ENST00000494486 HUNKP57058 714 aa15.27■□□□□ 0.04
TRIM59-206ENST00000494486 KIF23Q02241 960 aaPredicted RBP15.27■□□□□ 0.04
TRIM59-206ENST00000494486 CCDC102AQ96A19 550 aa15.27■□□□□ 0.04
TRIM59-206ENST00000494486 SETDB2Q96T68 719 aa15.27■□□□□ 0.04
TRIM59-206ENST00000494486 PGAP2Q9UHJ9 254 aa15.27■□□□□ 0.04
TRIM59-206ENST00000494486 PSMD1Q99460 953 aa15.26■□□□□ 0.03
TRIM59-206ENST00000494486 GLIS2Q9BZE0 524 aaPredicted RBP15.26■□□□□ 0.03
TRIM59-206ENST00000494486 FAM155AB1AL88 458 aaPredicted RBP15.25■□□□□ 0.03
TRIM59-206ENST00000494486 RGMBQ6NW40 437 aa15.25■□□□□ 0.03
TRIM59-206ENST00000494486 OLFM4Q6UX06 510 aa15.24■□□□□ 0.03
TRIM59-206ENST00000494486 CDC37L1Q7L3B6 337 aa15.24■□□□□ 0.03
TRIM59-206ENST00000494486 VSIG10Q8N0Z9 540 aa15.24■□□□□ 0.03
TRIM59-206ENST00000494486 ZC3H15Q8WU90 426 aaKnown RBP15.24■□□□□ 0.03
TRIM59-206ENST00000494486 HDAC9Q9UKV0 1011 aa15.24■□□□□ 0.03
TRIM59-206ENST00000494486 EIF4A2Q14240 407 aaKnown RBP15.23■□□□□ 0.03
TRIM59-206ENST00000494486 REM2Q8IYK8 340 aaPredicted RBP15.23■□□□□ 0.03
TRIM59-206ENST00000494486 GPRC5DQ9NZD1 345 aa15.23■□□□□ 0.03
TRIM59-206ENST00000494486 ARFGEF2Q9Y6D5 1785 aa15.22■□□□□ 0.03
TRIM59-206ENST00000494486 KLRG2A4D1S0 409 aaPredicted RBP15.22■□□□□ 0.03
TRIM59-206ENST00000494486 ALDH1B1P30837 517 aa15.22■□□□□ 0.03
TRIM59-206ENST00000494486 COLQQ9Y215 455 aaPredicted RBP15.22■□□□□ 0.03
TRIM59-206ENST00000494486 STARD3NLO95772 234 aa15.21■□□□□ 0.03
TRIM59-206ENST00000494486 CC2D2BQ6DHV5 1058 aa15.21■□□□□ 0.03
TRIM59-206ENST00000494486 FBXO46Q6PJ61 603 aaPredicted RBP15.21■□□□□ 0.03
TRIM59-206ENST00000494486 TESK2Q96S53 571 aa15.21■□□□□ 0.03
TRIM59-206ENST00000494486 CSRNP1Q96S65 589 aa15.21■□□□□ 0.03
TRIM59-206ENST00000494486 LARGE2Q8N3Y3 721 aa15.2■□□□□ 0.02
TRIM59-206ENST00000494486 SLC52A2Q9HAB3 445 aa15.2■□□□□ 0.02
TRIM59-206ENST00000494486 POLKQ9UBT6 870 aa15.2■□□□□ 0.02
TRIM59-206ENST00000494486 TBC1D2BQ9UPU7 963 aa15.2■□□□□ 0.02
TRIM59-206ENST00000494486 ZNF157P51786 506 aaPredicted RBP15.19■□□□□ 0.02
TRIM59-206ENST00000494486 SLC39A6Q13433 755 aa15.19■□□□□ 0.02
TRIM59-206ENST00000494486 GRIPAP1Q4V328 841 aa15.19■□□□□ 0.02
TRIM59-206ENST00000494486 NBPF5PQ86XG9 351 aaPredicted RBP15.18■□□□□ 0.02
TRIM59-206ENST00000494486 C2orf69Q8N8R5 385 aa15.18■□□□□ 0.02
TRIM59-206ENST00000494486 ANKRD26Q9UPS8 1709 aa15.17■□□□□ 0.02
TRIM59-206ENST00000494486 NPM2Q86SE8 214 aaKnown RBP15.17■□□□□ 0.02
TRIM59-206ENST00000494486 NIM1KQ8IY84 436 aa15.17■□□□□ 0.02
TRIM59-206ENST00000494486 GBA2Q9HCG7 927 aaPredicted RBP15.17■□□□□ 0.02
TRIM59-206ENST00000494486 PITPNM2Q9BZ72 1349 aa15.17■□□□□ 0.02
TRIM59-206ENST00000494486 BCORQ6W2J9 1755 aa15.16■□□□□ 0.02
TRIM59-206ENST00000494486 IL6STP40189 918 aaPredicted RBP15.16■□□□□ 0.02
TRIM59-206ENST00000494486 MNX1P50219 401 aaPredicted RBP15.16■□□□□ 0.02
TRIM59-206ENST00000494486 INTS3Q68E01 1043 aaKnown RBP15.16■□□□□ 0.02
TRIM59-206ENST00000494486 USP48Q86UV5 1035 aa15.16■□□□□ 0.02
TRIM59-206ENST00000494486 ZNF296Q8WUU4 475 aaPredicted RBP15.16■□□□□ 0.02
TRIM59-206ENST00000494486 CACNA1SQ13698 1873 aa15.16■□□□□ 0.02
TRIM59-206ENST00000494486 SNED1Q8TER0 1413 aa15.16■□□□□ 0.02
TRIM59-206ENST00000494486 CAMTA2O94983 1202 aa15.15■□□□□ 0.02
TRIM59-206ENST00000494486 SLC10A3P09131 477 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms