RNA–Protein interactions for RNA: ENST00000494447.1

CATIP-204, Transcript of ciliogenesis associated TTC17 interacting protein, human

TSL 2

Gene CATIP, Length 2,383 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CATIP-204	ENST00000494447	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	27.7	■■■□□ 2.02
CATIP-204	ENST00000494447	AMOT	Q4VCS5	1084 aa		27.7	■■■□□ 2.02
CATIP-204	ENST00000494447	FOXD4L3	Q6VB84	417 aa	Predicted RBP	27.7	■■■□□ 2.02
CATIP-204	ENST00000494447	RUFY3	Q7L099	469 aa		27.7	■■■□□ 2.02
CATIP-204	ENST00000494447	TMEM87A	Q8NBN3	555 aa		27.7	■■■□□ 2.02
CATIP-204	ENST00000494447	LIMCH1	Q9UPQ0	1083 aa		27.7	■■■□□ 2.02
CATIP-204	ENST00000494447	SPG7	Q9UQ90	795 aa		27.7	■■■□□ 2.02
CATIP-204	ENST00000494447	PRKCSH	P14314	528 aa	Predicted RBP	27.69	■■■□□ 2.02
CATIP-204	ENST00000494447	CLASRP	Q8N2M8	674 aa	Known RBP	27.69	■■■□□ 2.02
CATIP-204	ENST00000494447	NCAPD2	Q15021	1401 aa		27.69	■■■□□ 2.02
CATIP-204	ENST00000494447	ATF3	P18847	181 aa		27.68	■■■□□ 2.02
CATIP-204	ENST00000494447	TSPY26P	Q9H489	355 aa		27.68	■■■□□ 2.02
CATIP-204	ENST00000494447	MAP3K2	Q9Y2U5	619 aa		27.68	■■■□□ 2.02
CATIP-204	ENST00000494447	PXDN	Q92626	1479 aa		27.68	■■■□□ 2.02
CATIP-204	ENST00000494447	TCHH	Q07283	1943 aa		27.68	■■■□□ 2.02
CATIP-204	ENST00000494447	HEG1	Q9ULI3	1381 aa		27.68	■■■□□ 2.02
CATIP-204	ENST00000494447	OVOS2	A0A0G2JMS6	1433 aa		27.67	■■■□□ 2.02
CATIP-204	ENST00000494447	ZNF500	O60304	480 aa	Predicted RBP	27.67	■■■□□ 2.02
CATIP-204	ENST00000494447	GIGYF1	O75420	1035 aa	Predicted RBP	27.67	■■■□□ 2.02
CATIP-204	ENST00000494447	TPM2	P07951	284 aa		27.67	■■■□□ 2.02
CATIP-204	ENST00000494447	KSR2	Q6VAB6	950 aa		27.67	■■■□□ 2.02
CATIP-204	ENST00000494447	ORAI2	Q96SN7	254 aa		27.67	■■■□□ 2.02
CATIP-204	ENST00000494447	DIAPH3	Q9NSV4	1193 aa		27.67	■■■□□ 2.02
CATIP-204	ENST00000494447	ECHDC1	Q9NTX5	307 aa		27.67	■■■□□ 2.02
CATIP-204	ENST00000494447	RNF214	Q8ND24	703 aa		27.66	■■■□□ 2.02
CATIP-204	ENST00000494447	RUFY2	Q8WXA3	655 aa		27.66	■■■□□ 2.02
CATIP-204	ENST00000494447	C9orf78	Q9NZ63	289 aa	Predicted RBP	27.66	■■■□□ 2.02
CATIP-204	ENST00000494447	ZSCAN22	P10073	491 aa	Predicted RBP	27.66	■■■□□ 2.02
CATIP-204	ENST00000494447	PROSER3	Q2NL68	480 aa		27.66	■■■□□ 2.02
CATIP-204	ENST00000494447	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	27.66	■■■□□ 2.02
CATIP-204	ENST00000494447	C1orf141	Q5JVX7	400 aa		27.65	■■■□□ 2.02
CATIP-204	ENST00000494447	PHF14	O94880	888 aa		27.64	■■■□□ 2.02
CATIP-204	ENST00000494447	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	27.64	■■■□□ 2.02
CATIP-204	ENST00000494447	ERC1	Q8IUD2	1116 aa		27.64	■■■□□ 2.02
CATIP-204	ENST00000494447	ZKSCAN5	Q9Y2L8	839 aa		27.64	■■■□□ 2.02
CATIP-204	ENST00000494447	PTH1R	Q03431	593 aa		27.64	■■■□□ 2.01
CATIP-204	ENST00000494447	KCNB2	Q92953	911 aa		27.64	■■■□□ 2.01
CATIP-204	ENST00000494447	LARP6	Q9BRS8	491 aa	Known RBP	27.64	■■■□□ 2.01
CATIP-204	ENST00000494447	PA2G4	Q9UQ80	394 aa	Known RBP	27.64	■■■□□ 2.01
CATIP-204	ENST00000494447	XIRP1	Q702N8	1843 aa	Known RBP	27.63	■■■□□ 2.01
CATIP-204	ENST00000494447	STX6	O43752	255 aa		27.63	■■■□□ 2.01
CATIP-204	ENST00000494447	CAST	P20810	708 aa	Known RBP	27.63	■■■□□ 2.01
CATIP-204	ENST00000494447	SYT1	P21579	422 aa		27.63	■■■□□ 2.01
CATIP-204	ENST00000494447	HYPK	Q9NX55	129 aa		27.63	■■■□□ 2.01
CATIP-204	ENST00000494447	HDAC5	Q9UQL6	1122 aa		27.63	■■■□□ 2.01
CATIP-204	ENST00000494447	ARHGEF25	Q86VW2	580 aa		27.63	■■■□□ 2.01
CATIP-204	ENST00000494447	CPA1	P15085	419 aa		27.62	■■■□□ 2.01
CATIP-204	ENST00000494447	CWF19L2	Q2TBE0	894 aa	Known RBP	27.62	■■■□□ 2.01
CATIP-204	ENST00000494447	GPATCH3	Q96I76	525 aa		27.62	■■■□□ 2.01
CATIP-204	ENST00000494447	CCDC39	Q9UFE4	941 aa		27.62	■■■□□ 2.01
CATIP-204	ENST00000494447	IFIT2	P09913	472 aa	Known RBP	27.62	■■■□□ 2.01
CATIP-204	ENST00000494447	MCM5	P33992	734 aa		27.62	■■■□□ 2.01
CATIP-204	ENST00000494447	SMC3	Q9UQE7	1217 aa		27.62	■■■□□ 2.01
CATIP-204	ENST00000494447	CNPY2	Q9Y2B0	182 aa		27.62	■■■□□ 2.01
CATIP-204	ENST00000494447	C1orf167	Q5SNV9	1468 aa		27.61	■■■□□ 2.01
CATIP-204	ENST00000494447	GC	P02774	474 aa		27.61	■■■□□ 2.01
CATIP-204	ENST00000494447	PRAMEF22	A3QJZ6	481 aa		27.6	■■■□□ 2.01
CATIP-204	ENST00000494447	LARGE1	O95461	756 aa		27.6	■■■□□ 2.01
CATIP-204	ENST00000494447	TM6SF1	Q9BZW5	370 aa		27.6	■■■□□ 2.01
CATIP-204	ENST00000494447	VPS53	Q5VIR6	699 aa		27.6	■■■□□ 2.01
CATIP-204	ENST00000494447	UBE2Q2	Q8WVN8	375 aa		27.6	■■■□□ 2.01
CATIP-204	ENST00000494447	EVI5L	Q96CN4	794 aa		27.6	■■■□□ 2.01
CATIP-204	ENST00000494447	SLIT3	O75094	1523 aa		27.6	■■■□□ 2.01
CATIP-204	ENST00000494447	SIPA1L3	O60292	1781 aa	Predicted RBP	27.6	■■■□□ 2.01
CATIP-204	ENST00000494447	F13A1	P00488	732 aa		27.59	■■■□□ 2.01
CATIP-204	ENST00000494447	ADCK5	Q3MIX3	580 aa		27.59	■■■□□ 2.01
CATIP-204	ENST00000494447	ZSWIM6	Q9HCJ5	1215 aa		27.59	■■■□□ 2.01
CATIP-204	ENST00000494447	UTY	O14607	1347 aa		27.59	■■■□□ 2.01
CATIP-204	ENST00000494447	DCC	P43146	1447 aa		27.59	■■■□□ 2.01
CATIP-204	ENST00000494447	PRPF40B	Q6NWY9	871 aa	Known RBP	27.59	■■■□□ 2.01
CATIP-204	ENST00000494447	CADPS2	Q86UW7	1296 aa		27.59	■■■□□ 2.01
CATIP-204	ENST00000494447	LINS1	Q8NG48	757 aa		27.58	■■■□□ 2.01
CATIP-204	ENST00000494447	KAZALD1	Q96I82	304 aa		27.58	■■■□□ 2.01
CATIP-204	ENST00000494447	JAKMIP1	Q96N16	626 aa	Known RBP	27.58	■■■□□ 2.01
CATIP-204	ENST00000494447	PDRG1	Q9NUG6	133 aa		27.58	■■■□□ 2.01
CATIP-204	ENST00000494447	MST1R	Q04912	1400 aa		27.58	■■■□□ 2.01
CATIP-204	ENST00000494447	CAMTA1	Q9Y6Y1	1673 aa		27.58	■■■□□ 2.01
CATIP-204	ENST00000494447	RRP9	O43818	475 aa	Known RBP	27.58	■■■□□ 2.01
CATIP-204	ENST00000494447	TERF1	P54274	439 aa		27.58	■■■□□ 2.01
CATIP-204	ENST00000494447	NECTIN1	Q15223	517 aa		27.58	■■■□□ 2.01
CATIP-204	ENST00000494447	CCDC183	Q5T5S1	534 aa		27.58	■■■□□ 2.01
CATIP-204	ENST00000494447	AACS	Q86V21	672 aa		27.58	■■■□□ 2.01
CATIP-204	ENST00000494447	ANKRD24	Q8TF21	1146 aa		27.58	■■■□□ 2.01
CATIP-204	ENST00000494447	SUCLG2	Q96I99	432 aa		27.58	■■■□□ 2.01
CATIP-204	ENST00000494447	XPC	Q01831	940 aa	Predicted RBP	27.57	■■■□□ 2
CATIP-204	ENST00000494447	GRM8	O00222	908 aa		27.57	■■■□□ 2
CATIP-204	ENST00000494447	ZSCAN31	Q96LW9	406 aa	Predicted RBP	27.57	■■■□□ 2
CATIP-204	ENST00000494447	SASH1	O94885	1247 aa		27.56	■■■□□ 2
CATIP-204	ENST00000494447	UBE2H	P62256	183 aa		27.56	■■■□□ 2
CATIP-204	ENST00000494447	CCDC171	Q6TFL3	1326 aa		27.56	■■■□□ 2
CATIP-204	ENST00000494447	CCDC83	Q8IWF9	413 aa		27.56	■■■□□ 2
CATIP-204	ENST00000494447	ATP6V1D	Q9Y5K8	247 aa		27.56	■■■□□ 2
CATIP-204	ENST00000494447	CYP46A1	Q9Y6A2	500 aa		27.56	■■■□□ 2
CATIP-204	ENST00000494447	HSP90AA2P	Q14568	343 aa	Predicted RBP	27.55	■■■□□ 2
CATIP-204	ENST00000494447	FAM184A	Q8NB25	1140 aa		27.55	■■■□□ 2
CATIP-204	ENST00000494447	SH2B1	Q9NRF2	756 aa	Predicted RBP	27.55	■■■□□ 2
CATIP-204	ENST00000494447	ADAMTS7	Q9UKP4	1686 aa		27.55	■■■□□ 2
CATIP-204	ENST00000494447	GJB2	P29033	226 aa		27.55	■■■□□ 2
CATIP-204	ENST00000494447	UVSSA	Q2YD98	709 aa		27.55	■■■□□ 2
CATIP-204	ENST00000494447	DDX21	Q9NR30	783 aa	Known RBP eCLIP	27.55	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms