RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 C2orf49Q9BVC5 232 aaPredicted RBP6.53□□□□□ -1.36
CMSS1-207ENST00000494412 CHMP3Q9Y3E7 222 aa6.53□□□□□ -1.36
CMSS1-207ENST00000494412 VEGFBP49765 207 aa6.52□□□□□ -1.37
CMSS1-207ENST00000494412 SMTNP53814 917 aa6.52□□□□□ -1.37
CMSS1-207ENST00000494412 CENPCQ03188 943 aa6.52□□□□□ -1.37
CMSS1-207ENST00000494412 EHHADHQ08426 723 aa6.52□□□□□ -1.37
CMSS1-207ENST00000494412 NAALADL2Q58DX5 795 aa6.52□□□□□ -1.37
CMSS1-207ENST00000494412 PRICKLE2Q7Z3G6 844 aa6.52□□□□□ -1.37
CMSS1-207ENST00000494412 STAG2Q8N3U4 1231 aa6.52□□□□□ -1.37
CMSS1-207ENST00000494412 XAGE2Q96GT9 111 aa6.52□□□□□ -1.37
CMSS1-207ENST00000494412 NGLY1Q96IV0 654 aa6.52□□□□□ -1.37
CMSS1-207ENST00000494412 FAM161BQ96MY7 647 aa6.52□□□□□ -1.37
CMSS1-207ENST00000494412 ESYT1Q9BSJ8 1104 aa6.52□□□□□ -1.37
CMSS1-207ENST00000494412 MRS2Q9HD23 443 aa6.52□□□□□ -1.37
CMSS1-207ENST00000494412 SCAMP3O14828 347 aaKnown RBP6.51□□□□□ -1.37
CMSS1-207ENST00000494412 RHOQP17081 205 aa6.51□□□□□ -1.37
CMSS1-207ENST00000494412 RNF144AP50876 292 aaPredicted RBP6.51□□□□□ -1.37
CMSS1-207ENST00000494412 FGD1P98174 961 aa6.51□□□□□ -1.37
CMSS1-207ENST00000494412 DSC3Q14574 896 aa6.51□□□□□ -1.37
CMSS1-207ENST00000494412 MTFR1Q15390 333 aa6.51□□□□□ -1.37
CMSS1-207ENST00000494412 TLR1Q15399 786 aa6.51□□□□□ -1.37
CMSS1-207ENST00000494412 SLC27A3Q5K4L6 730 aa6.51□□□□□ -1.37
CMSS1-207ENST00000494412 C9orf131Q5VYM1 1079 aa6.51□□□□□ -1.37
CMSS1-207ENST00000494412 ABTB2Q8N961 1025 aa6.51□□□□□ -1.37
CMSS1-207ENST00000494412 ZNF775Q96BV0 537 aaPredicted RBP6.51□□□□□ -1.37
CMSS1-207ENST00000494412 DUSP9Q99956 384 aaKnown RBP6.51□□□□□ -1.37
CMSS1-207ENST00000494412 QTRT2Q9H974 415 aaKnown RBP6.51□□□□□ -1.37
CMSS1-207ENST00000494412 PPP1R1BQ9UD71 204 aaPredicted RBP6.51□□□□□ -1.37
CMSS1-207ENST00000494412 PARP2Q9UGN5 583 aa6.51□□□□□ -1.37
CMSS1-207ENST00000494412 LRFN2Q9ULH4 789 aa6.51□□□□□ -1.37
CMSS1-207ENST00000494412 HRH3Q9Y5N1 445 aa6.51□□□□□ -1.37
CMSS1-207ENST00000494412 USP3Q9Y6I4 520 aa6.51□□□□□ -1.37
CMSS1-207ENST00000494412 GPR182O15218 404 aa6.5□□□□□ -1.37
CMSS1-207ENST00000494412 PRPF40AO75400 957 aaKnown RBP6.5□□□□□ -1.37
CMSS1-207ENST00000494412 HDLBPQ00341 1268 aaKnown RBP6.5□□□□□ -1.37
CMSS1-207ENST00000494412 ATP2B2Q01814 1243 aa6.5□□□□□ -1.37
CMSS1-207ENST00000494412 PDE3BQ13370 1112 aa6.5□□□□□ -1.37
CMSS1-207ENST00000494412 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.5□□□□□ -1.37
CMSS1-207ENST00000494412 ATCAYQ86WG3 371 aa6.5□□□□□ -1.37
CMSS1-207ENST00000494412 FAM129BQ96TA1 746 aa6.5□□□□□ -1.37
CMSS1-207ENST00000494412 GRIP2Q9C0E4 1043 aa6.5□□□□□ -1.37
CMSS1-207ENST00000494412 ZBTB39O15060 712 aa6.49□□□□□ -1.37
CMSS1-207ENST00000494412 BRD2P25440 801 aaKnown RBP6.49□□□□□ -1.37
CMSS1-207ENST00000494412 PTSQ03393 145 aa6.49□□□□□ -1.37
CMSS1-207ENST00000494412 POU4F2Q12837 409 aa6.49□□□□□ -1.37
CMSS1-207ENST00000494412 PSMD2Q13200 908 aa6.49□□□□□ -1.37
CMSS1-207ENST00000494412 LYSMD3Q7Z3D4 306 aa6.49□□□□□ -1.37
CMSS1-207ENST00000494412 TMEM87AQ8NBN3 555 aa6.49□□□□□ -1.37
CMSS1-207ENST00000494412 MYO19Q96H55 970 aa6.49□□□□□ -1.37
CMSS1-207ENST00000494412 FHDC1Q9C0D6 1143 aaPredicted RBP6.49□□□□□ -1.37
CMSS1-207ENST00000494412 NIF3L1Q9GZT8 377 aa6.49□□□□□ -1.37
CMSS1-207ENST00000494412 RNF19AQ9NV58 838 aa6.49□□□□□ -1.37
CMSS1-207ENST00000494412 VTI1BQ9UEU0 232 aa6.49□□□□□ -1.37
CMSS1-207ENST00000494412 WWC3Q9ULE0 1092 aa6.49□□□□□ -1.37
CMSS1-207ENST00000494412 ZNF232Q9UNY5 417 aa6.49□□□□□ -1.37
CMSS1-207ENST00000494412 SERTM1A2A2V5 107 aa6.48□□□□□ -1.37
CMSS1-207ENST00000494412 CDK2AP1O14519 115 aa6.48□□□□□ -1.37
CMSS1-207ENST00000494412 SORBS3O60504 671 aa6.48□□□□□ -1.37
CMSS1-207ENST00000494412 GPC1P35052 558 aa6.48□□□□□ -1.37
CMSS1-207ENST00000494412 ITGAEP38570 1179 aa6.48□□□□□ -1.37
CMSS1-207ENST00000494412 FAM26DQ5JW98 314 aa6.48□□□□□ -1.37
CMSS1-207ENST00000494412 SETDB2Q96T68 719 aa6.48□□□□□ -1.37
CMSS1-207ENST00000494412 POLIQ9UNA4 740 aa6.48□□□□□ -1.37
CMSS1-207ENST00000494412 SENP3-EIF4A1A0A087X0R7 540 aa6.47□□□□□ -1.37
CMSS1-207ENST00000494412 PNMA6FA0A0J9YX94 578 aa6.47□□□□□ -1.37
CMSS1-207ENST00000494412 EML1O00423 815 aa6.47□□□□□ -1.37
CMSS1-207ENST00000494412 IGHA2P01877 340 aa6.47□□□□□ -1.37
CMSS1-207ENST00000494412 PHKA2P46019 1235 aa6.47□□□□□ -1.37
CMSS1-207ENST00000494412 DNM1Q05193 864 aaKnown RBP6.47□□□□□ -1.37
CMSS1-207ENST00000494412 SF3A1Q15459 793 aaKnown RBP6.47□□□□□ -1.37
CMSS1-207ENST00000494412 SH3PXD2AQ5TCZ1 1133 aa6.47□□□□□ -1.37
CMSS1-207ENST00000494412 TMC4Q7Z404 712 aa6.47□□□□□ -1.37
CMSS1-207ENST00000494412 NBPF15Q8N660 670 aa6.47□□□□□ -1.37
CMSS1-207ENST00000494412 EDEM1Q92611 657 aa6.47□□□□□ -1.37
CMSS1-207ENST00000494412 ALKBH8Q96BT7 664 aaKnown RBP6.47□□□□□ -1.37
CMSS1-207ENST00000494412 ZSCAN10Q96SZ4 725 aaPredicted RBP6.47□□□□□ -1.37
CMSS1-207ENST00000494412 CABP1Q9NZU7 370 aa6.47□□□□□ -1.37
CMSS1-207ENST00000494412 IQSEC3Q9UPP2 1182 aaPredicted RBP6.47□□□□□ -1.37
CMSS1-207ENST00000494412 HCN4Q9Y3Q4 1203 aa6.47□□□□□ -1.37
CMSS1-207ENST00000494412 TERTO14746 1132 aaKnown RBP6.46□□□□□ -1.38
CMSS1-207ENST00000494412 DAB2P98082 770 aa6.46□□□□□ -1.38
CMSS1-207ENST00000494412 DGKZQ13574 1117 aa6.46□□□□□ -1.38
CMSS1-207ENST00000494412 LDLRAD1Q5T700 205 aa6.46□□□□□ -1.38
CMSS1-207ENST00000494412 TMEM214Q6NUQ4 689 aaKnown RBP6.46□□□□□ -1.38
CMSS1-207ENST00000494412 NBPF10Q6P3W6 841 aaKnown RBP6.46□□□□□ -1.38
CMSS1-207ENST00000494412 ALDH16A1Q8IZ83 802 aa6.46□□□□□ -1.38
CMSS1-207ENST00000494412 NXF1Q9UBU9 619 aaKnown RBP6.46□□□□□ -1.38
CMSS1-207ENST00000494412 PARP3Q9Y6F1 533 aa6.46□□□□□ -1.38
CMSS1-207ENST00000494412 SLC35F4A4IF30 521 aa6.45□□□□□ -1.38
CMSS1-207ENST00000494412 PPFIA3O75145 1194 aa6.45□□□□□ -1.38
CMSS1-207ENST00000494412 MZF1P28698 734 aaPredicted RBP6.45□□□□□ -1.38
CMSS1-207ENST00000494412 NOS2P35228 1153 aa6.45□□□□□ -1.38
CMSS1-207ENST00000494412 ZAP70P43403 619 aa6.45□□□□□ -1.38
CMSS1-207ENST00000494412 USP5P45974 858 aa6.45□□□□□ -1.38
CMSS1-207ENST00000494412 TEAD4Q15561 434 aa6.45□□□□□ -1.38
CMSS1-207ENST00000494412 ENOX2Q16206 610 aaKnown RBP6.45□□□□□ -1.38
CMSS1-207ENST00000494412 RTN1Q16799 776 aa6.45□□□□□ -1.38
CMSS1-207ENST00000494412 C11orf91Q3C1V1 193 aa6.45□□□□□ -1.38
CMSS1-207ENST00000494412 LCE2CQ5TA81 110 aa6.45□□□□□ -1.38
CMSS1-207ENST00000494412 NT5DC4Q86YG4 428 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms