RNA–Protein interactions for RNA: ENST00000494397.5

ARHGAP4-223, Transcript of Rho GTPase activating protein 4, human

TSL 5

Gene ARHGAP4, Length 1,752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP4-223	ENST00000494397	VSIG10	Q8N0Z9	540 aa		27.71	■■■□□ 2.03
ARHGAP4-223	ENST00000494397	KAZALD1	Q96I82	304 aa		27.71	■■■□□ 2.03
ARHGAP4-223	ENST00000494397	THRAP3	Q9Y2W1	955 aa	Known RBP	27.71	■■■□□ 2.03
ARHGAP4-223	ENST00000494397	PIGB	Q92521	554 aa		27.7	■■■□□ 2.02
ARHGAP4-223	ENST00000494397	ADAMTS2	O95450	1211 aa		27.69	■■■□□ 2.02
ARHGAP4-223	ENST00000494397	TEX13A	Q9BXU3	409 aa	Predicted RBP	27.69	■■■□□ 2.02
ARHGAP4-223	ENST00000494397	COL15A1	P39059	1388 aa		27.68	■■■□□ 2.02
ARHGAP4-223	ENST00000494397	ERC1	Q8IUD2	1116 aa		27.68	■■■□□ 2.02
ARHGAP4-223	ENST00000494397	BICC1	Q9H694	974 aa	Known RBP	27.68	■■■□□ 2.02
ARHGAP4-223	ENST00000494397	IL1RAPL2	Q9NP60	686 aa		27.68	■■■□□ 2.02
ARHGAP4-223	ENST00000494397	SPATA31A1	Q5TZJ5	1347 aa		27.67	■■■□□ 2.02
ARHGAP4-223	ENST00000494397	A1BG	P04217	495 aa		27.66	■■■□□ 2.02
ARHGAP4-223	ENST00000494397	PIP4K2B	P78356	416 aa		27.66	■■■□□ 2.02
ARHGAP4-223	ENST00000494397	NRAP	Q86VF7	1730 aa		27.66	■■■□□ 2.02
ARHGAP4-223	ENST00000494397	WNK3	Q9BYP7	1800 aa		27.66	■■■□□ 2.02
ARHGAP4-223	ENST00000494397	BCL9	O00512	1426 aa		27.66	■■■□□ 2.02
ARHGAP4-223	ENST00000494397	TBC1D2	Q9BYX2	928 aa		27.65	■■■□□ 2.02
ARHGAP4-223	ENST00000494397	ATG3	Q9NT62	314 aa		27.65	■■■□□ 2.02
ARHGAP4-223	ENST00000494397	OS9	Q13438	667 aa	Predicted RBP	27.65	■■■□□ 2.02
ARHGAP4-223	ENST00000494397	ASAP1	Q9ULH1	1129 aa		27.65	■■■□□ 2.02
ARHGAP4-223	ENST00000494397	ARFGEF2	Q9Y6D5	1785 aa		27.64	■■■□□ 2.02
ARHGAP4-223	ENST00000494397	TSHZ3	Q63HK5	1081 aa		27.63	■■■□□ 2.01
ARHGAP4-223	ENST00000494397	TTLL7	Q6ZT98	887 aa		27.62	■■■□□ 2.01
ARHGAP4-223	ENST00000494397	NUTM1	Q86Y26	1132 aa		27.62	■■■□□ 2.01
ARHGAP4-223	ENST00000494397	USP42	Q9H9J4	1324 aa	Known RBP	27.61	■■■□□ 2.01
ARHGAP4-223	ENST00000494397	SLIT2	O94813	1529 aa		27.61	■■■□□ 2.01
ARHGAP4-223	ENST00000494397	NUTM2B	A6NNL0	878 aa	Predicted RBP	27.6	■■■□□ 2.01
ARHGAP4-223	ENST00000494397	NUTM2E	B1AL46	878 aa	Predicted RBP	27.6	■■■□□ 2.01
ARHGAP4-223	ENST00000494397	NUTM2A	Q8IVF1	878 aa	Predicted RBP	27.6	■■■□□ 2.01
ARHGAP4-223	ENST00000494397	CLASRP	Q8N2M8	674 aa	Known RBP	27.6	■■■□□ 2.01
ARHGAP4-223	ENST00000494397	ATP5J2-PTCD1	G3V325	749 aa		27.6	■■■□□ 2.01
ARHGAP4-223	ENST00000494397	SPATA31A5	Q5VU36	1347 aa		27.59	■■■□□ 2.01
ARHGAP4-223	ENST00000494397	SPATA31A7	Q8IWB4	1347 aa		27.59	■■■□□ 2.01
ARHGAP4-223	ENST00000494397		A0A087WZG4	1122 aa		27.59	■■■□□ 2.01
ARHGAP4-223	ENST00000494397	REC8	O95072	547 aa		27.59	■■■□□ 2.01
ARHGAP4-223	ENST00000494397	STARD3NL	O95772	234 aa		27.59	■■■□□ 2.01
ARHGAP4-223	ENST00000494397	RABL6	Q3YEC7	729 aa	Predicted RBP	27.59	■■■□□ 2.01
ARHGAP4-223	ENST00000494397	DNAJC10	Q8IXB1	793 aa		27.59	■■■□□ 2.01
ARHGAP4-223	ENST00000494397	PA2G4	Q9UQ80	394 aa	Known RBP	27.59	■■■□□ 2.01
ARHGAP4-223	ENST00000494397	TTC41P	Q6P2S7	1318 aa		27.59	■■■□□ 2.01
ARHGAP4-223	ENST00000494397	CASP7	P55210	303 aa		27.58	■■■□□ 2.01
ARHGAP4-223	ENST00000494397	G3BP1	Q13283	466 aa	Known RBP eCLIP	27.58	■■■□□ 2.01
ARHGAP4-223	ENST00000494397	UBE3B	Q7Z3V4	1068 aa		27.58	■■■□□ 2.01
ARHGAP4-223	ENST00000494397	SNX21	Q969T3	373 aa		27.58	■■■□□ 2.01
ARHGAP4-223	ENST00000494397	KIF2C	Q99661	725 aa		27.58	■■■□□ 2.01
ARHGAP4-223	ENST00000494397	NWD2	Q9ULI1	1742 aa		27.58	■■■□□ 2.01
ARHGAP4-223	ENST00000494397	UBAP1L	F5GYI3	381 aa		27.58	■■■□□ 2
ARHGAP4-223	ENST00000494397	ERC2	O15083	957 aa		27.58	■■■□□ 2
ARHGAP4-223	ENST00000494397	DDB1	Q16531	1140 aa		27.58	■■■□□ 2
ARHGAP4-223	ENST00000494397	EPHA10	Q5JZY3	1008 aa		27.58	■■■□□ 2
ARHGAP4-223	ENST00000494397	PI4K2B	Q8TCG2	481 aa		27.58	■■■□□ 2
ARHGAP4-223	ENST00000494397	USP26	Q9BXU7	913 aa		27.58	■■■□□ 2
ARHGAP4-223	ENST00000494397	NUP188	Q5SRE5	1749 aa		27.57	■■■□□ 2
ARHGAP4-223	ENST00000494397	BARGIN	Q6ZT62	677 aa		27.57	■■■□□ 2
ARHGAP4-223	ENST00000494397	CWC25	Q9NXE8	425 aa	Predicted RBP	27.57	■■■□□ 2
ARHGAP4-223	ENST00000494397	TRIM6-TRIM34	B2RNG4	842 aa		27.56	■■■□□ 2
ARHGAP4-223	ENST00000494397		H7C1W4	665 aa		27.56	■■■□□ 2
ARHGAP4-223	ENST00000494397	RBM42	Q9BTD8	480 aa	Known RBP	27.56	■■■□□ 2
ARHGAP4-223	ENST00000494397	TUBGCP6	Q96RT7	1819 aa		27.56	■■■□□ 2
ARHGAP4-223	ENST00000494397	HSCB	Q8IWL3	235 aa		27.55	■■■□□ 2
ARHGAP4-223	ENST00000494397	CCDC191	Q8NCU4	936 aa		27.55	■■■□□ 2
ARHGAP4-223	ENST00000494397	ITGB4	P16144	1822 aa		27.55	■■■□□ 2
ARHGAP4-223	ENST00000494397	ZBTB3	Q9H5J0	574 aa		27.55	■■■□□ 2
ARHGAP4-223	ENST00000494397	COPRS	Q9NQ92	184 aa		27.55	■■■□□ 2
ARHGAP4-223	ENST00000494397	RILPL2	Q969X0	211 aa		27.54	■■■□□ 2
ARHGAP4-223	ENST00000494397	NBR1	Q14596	966 aa		27.53	■■■□□ 2
ARHGAP4-223	ENST00000494397	GPATCH3	Q96I76	525 aa		27.53	■■■□□ 2
ARHGAP4-223	ENST00000494397	AFDN	P55196	1824 aa	Known RBP	27.53	■■■□□ 2
ARHGAP4-223	ENST00000494397	GLRX3	O76003	335 aa	Known RBP	27.53	■■■□□ 2
ARHGAP4-223	ENST00000494397	SASH1	O94885	1247 aa		27.53	■■■□□ 2
ARHGAP4-223	ENST00000494397	CHML	P26374	656 aa		27.53	■■■□□ 2
ARHGAP4-223	ENST00000494397	IFIT2	P09913	472 aa	Known RBP	27.52	■■■□□ 2
ARHGAP4-223	ENST00000494397	RFX5	P48382	616 aa	Predicted RBP	27.52	■■■□□ 2
ARHGAP4-223	ENST00000494397	PRIM1	P49642	420 aa	Known RBP	27.52	■■■□□ 2
ARHGAP4-223	ENST00000494397	SYTL4	Q96C24	671 aa	Predicted RBP	27.52	■■■□□ 2
ARHGAP4-223	ENST00000494397	ESYT1	Q9BSJ8	1104 aa		27.52	■■■□□ 2
ARHGAP4-223	ENST00000494397	ECHDC1	Q9NTX5	307 aa		27.52	■■■□□ 2
ARHGAP4-223	ENST00000494397	KIF6	Q6ZMV9	814 aa		27.51	■■□□□ 1.99
ARHGAP4-223	ENST00000494397	JCAD	Q9P266	1359 aa		27.51	■■□□□ 1.99
ARHGAP4-223	ENST00000494397	UNC5CL	Q8IV45	518 aa		27.5	■■□□□ 1.99
ARHGAP4-223	ENST00000494397	JARID2	Q92833	1246 aa	Predicted RBP	27.5	■■□□□ 1.99
ARHGAP4-223	ENST00000494397	ISCA1	Q9BUE6	129 aa		27.5	■■□□□ 1.99
ARHGAP4-223	ENST00000494397	CYP19A1	P11511	503 aa	Predicted RBP	27.5	■■□□□ 1.99
ARHGAP4-223	ENST00000494397	TRIM28	Q13263	835 aa	Known RBP	27.5	■■□□□ 1.99
ARHGAP4-223	ENST00000494397	TCIRG1	Q13488	830 aa		27.5	■■□□□ 1.99
ARHGAP4-223	ENST00000494397	SLC4A9	Q96Q91	983 aa		27.5	■■□□□ 1.99
ARHGAP4-223	ENST00000494397	AACS	Q86V21	672 aa		27.49	■■□□□ 1.99
ARHGAP4-223	ENST00000494397	CNTROB	Q8N137	903 aa		27.49	■■□□□ 1.99
ARHGAP4-223	ENST00000494397	CCDC9	Q9Y3X0	531 aa	Known RBP	27.48	■■□□□ 1.99
ARHGAP4-223	ENST00000494397	DOT1L	Q8TEK3	1739 aa		27.48	■■□□□ 1.99
ARHGAP4-223	ENST00000494397	FOXO4	P98177	505 aa		27.48	■■□□□ 1.99
ARHGAP4-223	ENST00000494397	PTPN12	Q05209	780 aa	Known RBP	27.48	■■□□□ 1.99
ARHGAP4-223	ENST00000494397	RABEP1	Q15276	862 aa		27.48	■■□□□ 1.99
ARHGAP4-223	ENST00000494397	MARCH10	Q8NA82	808 aa	Predicted RBP	27.48	■■□□□ 1.99
ARHGAP4-223	ENST00000494397	SIL1	Q9H173	461 aa		27.48	■■□□□ 1.99
ARHGAP4-223	ENST00000494397	ANTXR1	Q9H6X2	564 aa		27.48	■■□□□ 1.99
ARHGAP4-223	ENST00000494397	KLHDC4	Q8TBB5	520 aa		27.46	■■□□□ 1.99
ARHGAP4-223	ENST00000494397	EAF2	Q96CJ1	260 aa	Predicted RBP	27.46	■■□□□ 1.99
ARHGAP4-223	ENST00000494397	MAP3K15	Q6ZN16	1313 aa		27.45	■■□□□ 1.99
ARHGAP4-223	ENST00000494397	TJP1	Q07157	1748 aa		27.45	■■□□□ 1.99

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