RNA–Protein interactions for RNA: ENST00000494300.1

NXF3-206, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 543 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-206ENST00000494300 ANKRD13DQ6ZTN6 518 aa8.03□□□□□ -1.12
NXF3-206ENST00000494300 CFAP53Q96M91 514 aa8.03□□□□□ -1.12
NXF3-206ENST00000494300 EPAS1Q99814 870 aa8.03□□□□□ -1.12
NXF3-206ENST00000494300 CDCA7Q9BWT1 371 aaPredicted RBP8.03□□□□□ -1.12
NXF3-206ENST00000494300 RIPOR2Q9Y4F9 1068 aa8.03□□□□□ -1.12
NXF3-206ENST00000494300 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.03□□□□□ -1.12
NXF3-206ENST00000494300 SPATA31A1Q5TZJ5 1347 aa8.03□□□□□ -1.12
NXF3-206ENST00000494300 CAMTA1Q9Y6Y1 1673 aa8.02□□□□□ -1.13
NXF3-206ENST00000494300 NPC1L1Q9UHC9 1359 aa8.02□□□□□ -1.13
NXF3-206ENST00000494300 PTPREP23469 700 aa8.02□□□□□ -1.13
NXF3-206ENST00000494300 LSM11P83369 360 aaKnown RBP eCLIP8.02□□□□□ -1.13
NXF3-206ENST00000494300 PDE3BQ13370 1112 aa8.02□□□□□ -1.13
NXF3-206ENST00000494300 SKIV2LQ15477 1246 aaKnown RBP8.02□□□□□ -1.13
NXF3-206ENST00000494300 SEPT12Q8IYM1 358 aa8.02□□□□□ -1.13
NXF3-206ENST00000494300 CARD10Q9BWT7 1032 aa8.02□□□□□ -1.13
NXF3-206ENST00000494300 ADAM33Q9BZ11 813 aa8.02□□□□□ -1.13
NXF3-206ENST00000494300 BCL2L12Q9HB09 334 aa8.02□□□□□ -1.13
NXF3-206ENST00000494300 EMILIN1Q9Y6C2 1016 aa8.02□□□□□ -1.13
NXF3-206ENST00000494300 INSRP06213 1382 aa8.01□□□□□ -1.13
NXF3-206ENST00000494300 ANKRD62A6NC57 917 aa8.01□□□□□ -1.13
NXF3-206ENST00000494300 SPDYE5A6NIY4 337 aa8.01□□□□□ -1.13
NXF3-206ENST00000494300 PER1O15534 1290 aaPredicted RBP8.01□□□□□ -1.13
NXF3-206ENST00000494300 FBLN1P23142 703 aa8.01□□□□□ -1.13
NXF3-206ENST00000494300 PBXIP1Q96AQ6 731 aa8.01□□□□□ -1.13
NXF3-206ENST00000494300 POLKQ9UBT6 870 aa8.01□□□□□ -1.13
NXF3-206ENST00000494300 LMO7Q8WWI1 1683 aa8.01□□□□□ -1.13
NXF3-206ENST00000494300 LTN1O94822 1766 aa8□□□□□ -1.13
NXF3-206ENST00000494300 CARNS1A5YM72 827 aa8□□□□□ -1.13
NXF3-206ENST00000494300 SOCS7O14512 581 aa8□□□□□ -1.13
NXF3-206ENST00000494300 IRF6O14896 467 aa8□□□□□ -1.13
NXF3-206ENST00000494300 MS4A1P11836 297 aa8□□□□□ -1.13
NXF3-206ENST00000494300 TCF3P15923 654 aa8□□□□□ -1.13
NXF3-206ENST00000494300 MAP2K5Q13163 448 aa8□□□□□ -1.13
NXF3-206ENST00000494300 DDB1Q16531 1140 aa8□□□□□ -1.13
NXF3-206ENST00000494300 HSP90AB2PQ58FF8 381 aa8□□□□□ -1.13
NXF3-206ENST00000494300 ILDR2Q71H61 639 aa8□□□□□ -1.13
NXF3-206ENST00000494300 KRT27Q7Z3Y8 459 aa8□□□□□ -1.13
NXF3-206ENST00000494300 RAPGEF4Q8WZA2 1011 aa8□□□□□ -1.13
NXF3-206ENST00000494300 RGS12O14924 1447 aa8□□□□□ -1.13
NXF3-206ENST00000494300 NRAPQ86VF7 1730 aa8□□□□□ -1.13
NXF3-206ENST00000494300 ANKRD26Q9UPS8 1709 aa8□□□□□ -1.13
NXF3-206ENST00000494300 EXOC5O00471 708 aa7.99□□□□□ -1.13
NXF3-206ENST00000494300 IL2RBP14784 551 aa7.99□□□□□ -1.13
NXF3-206ENST00000494300 MTHFSP49914 203 aa7.99□□□□□ -1.13
NXF3-206ENST00000494300 SF3B2Q13435 895 aaKnown RBP7.99□□□□□ -1.13
NXF3-206ENST00000494300 RALBP1Q15311 655 aa7.99□□□□□ -1.13
NXF3-206ENST00000494300 TSR1Q2NL82 804 aaKnown RBP7.99□□□□□ -1.13
NXF3-206ENST00000494300 NOL8Q76FK4 1167 aaKnown RBP7.99□□□□□ -1.13
NXF3-206ENST00000494300 ZNF526Q8TF50 670 aaPredicted RBP7.99□□□□□ -1.13
NXF3-206ENST00000494300 GLI3P10071 1580 aa7.98□□□□□ -1.13
NXF3-206ENST00000494300 MAP3K7O43318 606 aa7.98□□□□□ -1.13
NXF3-206ENST00000494300 MARCH6O60337 910 aa7.98□□□□□ -1.13
NXF3-206ENST00000494300 TATP17735 454 aaPredicted RBP7.98□□□□□ -1.13
NXF3-206ENST00000494300 DMRTA1Q5VZB9 504 aa7.98□□□□□ -1.13
NXF3-206ENST00000494300 UBXN4Q92575 508 aa7.98□□□□□ -1.13
NXF3-206ENST00000494300 GNEQ9Y223 722 aaKnown RBP7.98□□□□□ -1.13
NXF3-206ENST00000494300 NUDCQ9Y266 331 aa7.98□□□□□ -1.13
NXF3-206ENST00000494300 DIAPH1O60610 1272 aaKnown RBP7.97□□□□□ -1.13
NXF3-206ENST00000494300 EN1Q05925 392 aaPredicted RBP7.97□□□□□ -1.13
NXF3-206ENST00000494300 DNAJC14Q6Y2X3 702 aaPredicted RBP7.97□□□□□ -1.13
NXF3-206ENST00000494300 SPNS2Q8IVW8 549 aa7.97□□□□□ -1.13
NXF3-206ENST00000494300 USHBP1Q8N6Y0 703 aa7.97□□□□□ -1.13
NXF3-206ENST00000494300 CALR3Q96L12 384 aaKnown RBP7.97□□□□□ -1.13
NXF3-206ENST00000494300 FAM208AQ9UK61 1670 aaKnown RBP7.97□□□□□ -1.13
NXF3-206ENST00000494300 COL18A1P39060 1754 aa7.97□□□□□ -1.13
NXF3-206ENST00000494300 U2SURPO15042 1029 aaKnown RBP7.96□□□□□ -1.14
NXF3-206ENST00000494300 ANP32CO43423 234 aa7.96□□□□□ -1.14
NXF3-206ENST00000494300 NEFMP07197 916 aa7.96□□□□□ -1.14
NXF3-206ENST00000494300 PPP2R1AP30153 589 aa7.96□□□□□ -1.14
NXF3-206ENST00000494300 FGD1P98174 961 aa7.96□□□□□ -1.14
NXF3-206ENST00000494300 EIF4A2Q14240 407 aaKnown RBP7.96□□□□□ -1.14
NXF3-206ENST00000494300 C6orf132Q5T0Z8 1188 aa7.96□□□□□ -1.14
NXF3-206ENST00000494300 NBPF6Q5VWK0 638 aa7.96□□□□□ -1.14
NXF3-206ENST00000494300 GIMAP6Q6P9H5 292 aa7.96□□□□□ -1.14
NXF3-206ENST00000494300 FAM196AQ6ZSG2 479 aa7.96□□□□□ -1.14
NXF3-206ENST00000494300 TEX2Q8IWB9 1127 aa7.96□□□□□ -1.14
NXF3-206ENST00000494300 NBPF4Q96M43 638 aa7.96□□□□□ -1.14
NXF3-206ENST00000494300 ZNF16P17020 682 aaPredicted RBP7.95□□□□□ -1.14
NXF3-206ENST00000494300 OSBPP22059 807 aa7.95□□□□□ -1.14
NXF3-206ENST00000494300 ADGRD1Q6QNK2 874 aa7.95□□□□□ -1.14
NXF3-206ENST00000494300 EXOC8Q8IYI6 725 aa7.95□□□□□ -1.14
NXF3-206ENST00000494300 ZCRB1Q8TBF4 217 aaKnown RBP7.95□□□□□ -1.14
NXF3-206ENST00000494300 DDX54Q8TDD1 881 aaKnown RBP7.95□□□□□ -1.14
NXF3-206ENST00000494300 EYA1Q99502 592 aa7.95□□□□□ -1.14
NXF3-206ENST00000494300 SPG7Q9UQ90 795 aa7.95□□□□□ -1.14
NXF3-206ENST00000494300 PPP1R3GB7ZBB8 358 aa7.94□□□□□ -1.14
NXF3-206ENST00000494300 NOM1Q5C9Z4 860 aaKnown RBP7.94□□□□□ -1.14
NXF3-206ENST00000494300 SULT6B1Q6IMI4 303 aa7.94□□□□□ -1.14
NXF3-206ENST00000494300 ZNF662Q6ZS27 426 aa7.94□□□□□ -1.14
NXF3-206ENST00000494300 GLMNQ92990 594 aa7.94□□□□□ -1.14
NXF3-206ENST00000494300 SUGT1Q9Y2Z0 365 aa7.94□□□□□ -1.14
NXF3-206ENST00000494300 PPME1Q9Y570 386 aa7.94□□□□□ -1.14
NXF3-206ENST00000494300 MYBBP1AQ9BQG0 1328 aaKnown RBP7.94□□□□□ -1.14
NXF3-206ENST00000494300 PCDH11XQ9BZA7 1347 aa7.94□□□□□ -1.14
NXF3-206ENST00000494300 PCDH11YQ9BZA8 1340 aa7.94□□□□□ -1.14
NXF3-206ENST00000494300 PEAK1Q9H792 1746 aa7.94□□□□□ -1.14
NXF3-206ENST00000494300 PARD3Q8TEW0 1356 aa7.94□□□□□ -1.14
NXF3-206ENST00000494300 RGPD5Q99666 1765 aa7.94□□□□□ -1.14
NXF3-206ENST00000494300 MAP2P11137 1827 aaKnown RBP7.94□□□□□ -1.14
NXF3-206ENST00000494300 OVOS2A0A0G2JMS6 1433 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms