RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 CARMIL3Q8ND23 1372 aa9.43□□□□□ -0.9
RBM39-239ENST00000494274 ELL2O00472 640 aaPredicted RBP9.43□□□□□ -0.9
RBM39-239ENST00000494274 GPTP24298 496 aa9.43□□□□□ -0.9
RBM39-239ENST00000494274 TTLL6Q8N841 843 aa9.43□□□□□ -0.9
RBM39-239ENST00000494274 CFAP44Q96MT7 982 aa9.43□□□□□ -0.9
RBM39-239ENST00000494274 ERVV-1B6SEH8 477 aa9.42□□□□□ -0.9
RBM39-239ENST00000494274 CALD1Q05682 793 aaKnown RBP9.42□□□□□ -0.9
RBM39-239ENST00000494274 PDIA6Q15084 440 aa9.42□□□□□ -0.9
RBM39-239ENST00000494274 PROSER3Q2NL68 480 aa9.42□□□□□ -0.9
RBM39-239ENST00000494274 C9orf131Q5VYM1 1079 aa9.42□□□□□ -0.9
RBM39-239ENST00000494274 COPS6Q7L5N1 327 aa9.42□□□□□ -0.9
RBM39-239ENST00000494274 GPBP1L1Q9HC44 474 aaPredicted RBP9.42□□□□□ -0.9
RBM39-239ENST00000494274 MBIPQ9NS73 344 aa9.42□□□□□ -0.9
RBM39-239ENST00000494274 SALL2Q9Y467 1007 aaPredicted RBP9.42□□□□□ -0.9
RBM39-239ENST00000494274 COL5A3P25940 1745 aaPredicted RBP9.42□□□□□ -0.9
RBM39-239ENST00000494274 MAP3K15Q6ZN16 1313 aa9.41□□□□□ -0.9
RBM39-239ENST00000494274 GNAI1P63096 354 aa9.41□□□□□ -0.9
RBM39-239ENST00000494274 HDGFL1Q5TGJ6 251 aa9.41□□□□□ -0.9
RBM39-239ENST00000494274 DUSP27Q5VZP5 1158 aa9.41□□□□□ -0.9
RBM39-239ENST00000494274 FAM9BQ8IZU0 186 aa9.41□□□□□ -0.9
RBM39-239ENST00000494274 XAGE3Q8WTP9 111 aa9.41□□□□□ -0.9
RBM39-239ENST00000494274 COL24A1Q17RW2 1714 aa9.41□□□□□ -0.9
RBM39-239ENST00000494274 ERBB4Q15303 1308 aa9.4□□□□□ -0.9
RBM39-239ENST00000494274 C21orf2O43822 256 aa9.4□□□□□ -0.9
RBM39-239ENST00000494274 GIGYF2Q6Y7W6 1299 aaKnown RBP9.4□□□□□ -0.9
RBM39-239ENST00000494274 NUTM1Q86Y26 1132 aa9.4□□□□□ -0.9
RBM39-239ENST00000494274 IFT57Q9NWB7 429 aa9.4□□□□□ -0.9
RBM39-239ENST00000494274 RNF181Q9P0P0 153 aa9.4□□□□□ -0.9
RBM39-239ENST00000494274 PDZRN3Q9UPQ7 1066 aa9.4□□□□□ -0.9
RBM39-239ENST00000494274 UTRNP46939 3433 aa9.4□□□□□ -0.9
RBM39-239ENST00000494274 ATP10DQ9P241 1426 aa9.39□□□□□ -0.91
RBM39-239ENST00000494274 C4AP0C0L4 1744 aa9.39□□□□□ -0.91
RBM39-239ENST00000494274 RGL2O15211 777 aa9.39□□□□□ -0.91
RBM39-239ENST00000494274 ZNF853P0CG23 659 aa9.39□□□□□ -0.91
RBM39-239ENST00000494274 SRGNP10124 158 aa9.39□□□□□ -0.91
RBM39-239ENST00000494274 RASSF7Q02833 373 aa9.39□□□□□ -0.91
RBM39-239ENST00000494274 ERFEQ4G0M1 354 aa9.39□□□□□ -0.91
RBM39-239ENST00000494274 SUSD4Q5VX71 490 aa9.39□□□□□ -0.91
RBM39-239ENST00000494274 LRP10Q7Z4F1 713 aa9.39□□□□□ -0.91
RBM39-239ENST00000494274 CNKSR1Q969H4 720 aa9.39□□□□□ -0.91
RBM39-239ENST00000494274 ZNF428Q96B54 188 aa9.39□□□□□ -0.91
RBM39-239ENST00000494274 MASTLQ96GX5 879 aa9.39□□□□□ -0.91
RBM39-239ENST00000494274 NYXQ9GZU5 481 aa9.39□□□□□ -0.91
RBM39-239ENST00000494274 DDX21Q9NR30 783 aaKnown RBP eCLIP9.39□□□□□ -0.91
RBM39-239ENST00000494274 CHPF2Q9P2E5 772 aa9.39□□□□□ -0.91
RBM39-239ENST00000494274 NPR1P16066 1061 aa9.38□□□□□ -0.91
RBM39-239ENST00000494274 C1QTNF8P60827 252 aa9.38□□□□□ -0.91
RBM39-239ENST00000494274 STYK1Q6J9G0 422 aa9.38□□□□□ -0.91
RBM39-239ENST00000494274 PPP1R42Q7Z4L9 355 aa9.38□□□□□ -0.91
RBM39-239ENST00000494274 ZNF34Q8IZ26 560 aa9.38□□□□□ -0.91
RBM39-239ENST00000494274 DBF4Q9UBU7 674 aaPredicted RBP9.38□□□□□ -0.91
RBM39-239ENST00000494274 HOXB7P09629 217 aa9.37□□□□□ -0.91
RBM39-239ENST00000494274 PARP10Q53GL7 1025 aa9.37□□□□□ -0.91
RBM39-239ENST00000494274 PRPF40BQ6NWY9 871 aaKnown RBP9.37□□□□□ -0.91
RBM39-239ENST00000494274 ANKRD13DQ6ZTN6 518 aa9.37□□□□□ -0.91
RBM39-239ENST00000494274 WWC1Q8IX03 1113 aa9.37□□□□□ -0.91
RBM39-239ENST00000494274 C8orf58Q8NAV2 365 aa9.37□□□□□ -0.91
RBM39-239ENST00000494274 TSR2Q969E8 191 aaKnown RBP9.37□□□□□ -0.91
RBM39-239ENST00000494274 UTP14AQ9BVJ6 771 aaKnown RBP9.37□□□□□ -0.91
RBM39-239ENST00000494274 HYPKQ9NX55 129 aa9.37□□□□□ -0.91
RBM39-239ENST00000494274 UBR2Q8IWV8 1755 aa9.37□□□□□ -0.91
RBM39-239ENST00000494274 UBN2Q6ZU65 1347 aa9.36□□□□□ -0.91
RBM39-239ENST00000494274 KLRG2A4D1S0 409 aaPredicted RBP9.36□□□□□ -0.91
RBM39-239ENST00000494274 TCERG1O14776 1098 aaKnown RBP9.36□□□□□ -0.91
RBM39-239ENST00000494274 LMNB1P20700 586 aa9.36□□□□□ -0.91
RBM39-239ENST00000494274 ALDH1B1P30837 517 aa9.36□□□□□ -0.91
RBM39-239ENST00000494274 TCIRG1Q13488 830 aa9.36□□□□□ -0.91
RBM39-239ENST00000494274 CCDC27Q2M243 656 aa9.36□□□□□ -0.91
RBM39-239ENST00000494274 HSP90AB3PQ58FF7 597 aa9.36□□□□□ -0.91
RBM39-239ENST00000494274 RPGRQ92834 1020 aaKnown RBP9.36□□□□□ -0.91
RBM39-239ENST00000494274 TRMT112Q9UI30 125 aaKnown RBP9.36□□□□□ -0.91
RBM39-239ENST00000494274 SIPA1L3O60292 1781 aaPredicted RBP9.35□□□□□ -0.91
RBM39-239ENST00000494274 ATP5J2-PTCD1G3V325 749 aa9.35□□□□□ -0.91
RBM39-239ENST00000494274 NFKBIEO00221 500 aa9.35□□□□□ -0.91
RBM39-239ENST00000494274 NTSR2O95665 410 aa9.35□□□□□ -0.91
RBM39-239ENST00000494274 PRELPP51888 382 aa9.35□□□□□ -0.91
RBM39-239ENST00000494274 OLFM4Q6UX06 510 aa9.35□□□□□ -0.91
RBM39-239ENST00000494274 RIC3Q7Z5B4 369 aa9.35□□□□□ -0.91
RBM39-239ENST00000494274 NLRP10Q86W26 655 aa9.35□□□□□ -0.91
RBM39-239ENST00000494274 TSPYL6Q8N831 410 aa9.35□□□□□ -0.91
RBM39-239ENST00000494274 PLBD2Q8NHP8 589 aa9.35□□□□□ -0.91
RBM39-239ENST00000494274 NLRP3Q96P20 1036 aa9.35□□□□□ -0.91
RBM39-239ENST00000494274 PHAXQ9H814 394 aaKnown RBP9.35□□□□□ -0.91
RBM39-239ENST00000494274 NMRK2Q9NPI5 230 aa9.35□□□□□ -0.91
RBM39-239ENST00000494274 GOLGB1Q14789 3259 aaKnown RBP9.35□□□□□ -0.91
RBM39-239ENST00000494274 HCLS1P14317 486 aaPredicted RBP9.34□□□□□ -0.91
RBM39-239ENST00000494274 RTL5Q5HYW3 569 aaPredicted RBP9.34□□□□□ -0.91
RBM39-239ENST00000494274 SOGA3Q5TF21 947 aa9.34□□□□□ -0.91
RBM39-239ENST00000494274 CCDC30Q5VVM6 783 aa9.34□□□□□ -0.91
RBM39-239ENST00000494274 SYNE4Q8N205 404 aa9.34□□□□□ -0.91
RBM39-239ENST00000494274 C7orf43Q8WVR3 580 aa9.34□□□□□ -0.91
RBM39-239ENST00000494274 RBM17Q96I25 401 aaKnown RBP9.34□□□□□ -0.91
RBM39-239ENST00000494274 CHMP4AQ9BY43 222 aa9.34□□□□□ -0.91
RBM39-239ENST00000494274 TAOK3Q9H2K8 898 aa9.34□□□□□ -0.91
RBM39-239ENST00000494274 RRAGCQ9HB90 399 aa9.34□□□□□ -0.91
RBM39-239ENST00000494274 ADCY9O60503 1353 aa9.34□□□□□ -0.91
RBM39-239ENST00000494274 GOLGA2Q08379 1002 aa9.33□□□□□ -0.92
RBM39-239ENST00000494274 CRY2Q49AN0 593 aa9.33□□□□□ -0.92
RBM39-239ENST00000494274 CCDC93Q567U6 631 aa9.33□□□□□ -0.92
RBM39-239ENST00000494274 SLC10A5Q5PT55 438 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms