RNA–Protein interactions for RNA: ENST00000494227.3

RN7SL538P-201, Transcript of RNA, 7SL, cytoplasmic 538, pseudogene, humanhuman

BASIC

Gene RN7SL538P, Length 304 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL538P-201ENST00000494227 PRAMEF22A3QJZ6 481 aa11.5□□□□□ -0.57
RN7SL538P-201ENST00000494227 ERVV-2B6SEH9 535 aa11.5□□□□□ -0.57
RN7SL538P-201ENST00000494227 KIF3CO14782 793 aa11.5□□□□□ -0.57
RN7SL538P-201ENST00000494227 TRIM27P14373 513 aa11.5□□□□□ -0.57
RN7SL538P-201ENST00000494227 G2E3Q7L622 706 aa11.5□□□□□ -0.57
RN7SL538P-201ENST00000494227 PHF14O94880 888 aa11.49□□□□□ -0.57
RN7SL538P-201ENST00000494227 CANXP27824 592 aaKnown RBP11.49□□□□□ -0.57
RN7SL538P-201ENST00000494227 B4GALNT3Q6L9W6 998 aa11.49□□□□□ -0.57
RN7SL538P-201ENST00000494227 ZNF790Q6PG37 636 aa11.49□□□□□ -0.57
RN7SL538P-201ENST00000494227 COG6Q9Y2V7 657 aa11.49□□□□□ -0.57
RN7SL538P-201ENST00000494227 HEG1Q9ULI3 1381 aa11.49□□□□□ -0.57
RN7SL538P-201ENST00000494227 ATF7IPQ6VMQ6 1270 aa11.48□□□□□ -0.57
RN7SL538P-201ENST00000494227 ZNF496Q96IT1 587 aaPredicted RBP11.48□□□□□ -0.57
RN7SL538P-201ENST00000494227 ADAMTS7Q9UKP4 1686 aa11.48□□□□□ -0.57
RN7SL538P-201ENST00000494227 COL5A3P25940 1745 aaPredicted RBP11.48□□□□□ -0.57
RN7SL538P-201ENST00000494227 EIF2S2P20042 333 aaKnown RBP11.47□□□□□ -0.57
RN7SL538P-201ENST00000494227 DZIP1LQ8IYY4 767 aaKnown RBP11.47□□□□□ -0.57
RN7SL538P-201ENST00000494227 PIGBQ92521 554 aa11.47□□□□□ -0.57
RN7SL538P-201ENST00000494227 CD2APQ9Y5K6 639 aa11.47□□□□□ -0.57
RN7SL538P-201ENST00000494227 KIF16BQ96L93 1317 aa11.46□□□□□ -0.57
RN7SL538P-201ENST00000494227 IPO8O15397 1037 aaKnown RBP11.46□□□□□ -0.57
RN7SL538P-201ENST00000494227 HDGFL1Q5TGJ6 251 aa11.46□□□□□ -0.57
RN7SL538P-201ENST00000494227 CCDC30Q5VVM6 783 aa11.46□□□□□ -0.57
RN7SL538P-201ENST00000494227 TMEM57Q8N5G2 664 aa11.46□□□□□ -0.57
RN7SL538P-201ENST00000494227 ARHGAP45Q92619 1136 aa11.46□□□□□ -0.57
RN7SL538P-201ENST00000494227 MRC1P22897 1456 aa11.45□□□□□ -0.58
RN7SL538P-201ENST00000494227 C10orf71Q711Q0 1435 aa11.45□□□□□ -0.58
RN7SL538P-201ENST00000494227 SOS1Q07889 1333 aaPredicted RBP11.45□□□□□ -0.58
RN7SL538P-201ENST00000494227 SPDYE4A6NLX3 237 aa11.45□□□□□ -0.58
RN7SL538P-201ENST00000494227 ANXA1P04083 346 aa11.45□□□□□ -0.58
RN7SL538P-201ENST00000494227 HOXB7P09629 217 aa11.45□□□□□ -0.58
RN7SL538P-201ENST00000494227 HTRA3P83110 453 aa11.45□□□□□ -0.58
RN7SL538P-201ENST00000494227 LINC00116Q8NCU8 138 aa11.45□□□□□ -0.58
RN7SL538P-201ENST00000494227 SPDYE1Q8NFV5 336 aaPredicted RBP11.45□□□□□ -0.58
RN7SL538P-201ENST00000494227 USP16Q9Y5T5 823 aa11.45□□□□□ -0.58
RN7SL538P-201ENST00000494227 ARFGEF1Q9Y6D6 1849 aa11.44□□□□□ -0.58
RN7SL538P-201ENST00000494227 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.44□□□□□ -0.58
RN7SL538P-201ENST00000494227 MVPQ14764 893 aaKnown RBP11.44□□□□□ -0.58
RN7SL538P-201ENST00000494227 PDIA6Q15084 440 aa11.44□□□□□ -0.58
RN7SL538P-201ENST00000494227 PROSER3Q2NL68 480 aa11.44□□□□□ -0.58
RN7SL538P-201ENST00000494227 API5Q9BZZ5 524 aaKnown RBP11.44□□□□□ -0.58
RN7SL538P-201ENST00000494227 PHAXQ9H814 394 aaKnown RBP11.44□□□□□ -0.58
RN7SL538P-201ENST00000494227 ATG3Q9NT62 314 aa11.44□□□□□ -0.58
RN7SL538P-201ENST00000494227 TMOD3Q9NYL9 352 aa11.44□□□□□ -0.58
RN7SL538P-201ENST00000494227 ASAP1Q9ULH1 1129 aa11.44□□□□□ -0.58
RN7SL538P-201ENST00000494227 MS4A1P11836 297 aa11.43□□□□□ -0.58
RN7SL538P-201ENST00000494227 TTC5Q8N0Z6 440 aa11.43□□□□□ -0.58
RN7SL538P-201ENST00000494227 AK7Q96M32 723 aa11.43□□□□□ -0.58
RN7SL538P-201ENST00000494227 FMNL2Q96PY5 1086 aa11.43□□□□□ -0.58
RN7SL538P-201ENST00000494227 STK31Q9BXU1 1019 aa11.43□□□□□ -0.58
RN7SL538P-201ENST00000494227 CHPF2Q9P2E5 772 aa11.43□□□□□ -0.58
RN7SL538P-201ENST00000494227 MYH14Q7Z406 1995 aaKnown RBP11.43□□□□□ -0.58
RN7SL538P-201ENST00000494227 ABCC4O15439 1325 aa11.42□□□□□ -0.58
RN7SL538P-201ENST00000494227 F6X3S4 739 aa11.42□□□□□ -0.58
RN7SL538P-201ENST00000494227 PTCD1O75127 700 aaKnown RBP11.42□□□□□ -0.58
RN7SL538P-201ENST00000494227 SNRPA1P09661 255 aaKnown RBP11.42□□□□□ -0.58
RN7SL538P-201ENST00000494227 FLIIQ13045 1269 aa11.42□□□□□ -0.58
RN7SL538P-201ENST00000494227 ITPK1Q13572 414 aa11.42□□□□□ -0.58
RN7SL538P-201ENST00000494227 FTSJ3Q8IY81 847 aaKnown RBP11.42□□□□□ -0.58
RN7SL538P-201ENST00000494227 CCDC136Q96JN2 1154 aa11.42□□□□□ -0.58
RN7SL538P-201ENST00000494227 NMRK2Q9NPI5 230 aa11.42□□□□□ -0.58
RN7SL538P-201ENST00000494227 ITPRIPQ8IWB1 547 aa11.41□□□□□ -0.58
RN7SL538P-201ENST00000494227 DNAJC5GQ8N7S2 189 aa11.41□□□□□ -0.58
RN7SL538P-201ENST00000494227 SLC4A9Q96Q91 983 aa11.41□□□□□ -0.58
RN7SL538P-201ENST00000494227 PCDHB15Q9Y5E8 787 aa11.41□□□□□ -0.58
RN7SL538P-201ENST00000494227 KDM3BQ7LBC6 1761 aa11.41□□□□□ -0.58
RN7SL538P-201ENST00000494227 SCN11AQ9UI33 1791 aa11.41□□□□□ -0.58
RN7SL538P-201ENST00000494227 KCPQ6ZWJ8 1503 aa11.4□□□□□ -0.58
RN7SL538P-201ENST00000494227 PTPRCP08575 1304 aa11.4□□□□□ -0.58
RN7SL538P-201ENST00000494227 TNRC6CQ9HCJ0 1690 aaKnown RBP11.4□□□□□ -0.58
RN7SL538P-201ENST00000494227 ZBTB7BO15156 539 aaPredicted RBP11.4□□□□□ -0.58
RN7SL538P-201ENST00000494227 PIP4K2AP48426 406 aaPredicted RBP11.4□□□□□ -0.58
RN7SL538P-201ENST00000494227 INTS3Q68E01 1043 aaKnown RBP11.4□□□□□ -0.58
RN7SL538P-201ENST00000494227 LRP10Q7Z4F1 713 aa11.4□□□□□ -0.58
RN7SL538P-201ENST00000494227 SIPA1L3O60292 1781 aaPredicted RBP11.4□□□□□ -0.58
RN7SL538P-201ENST00000494227 TJP1Q07157 1748 aa11.4□□□□□ -0.58
RN7SL538P-201ENST00000494227 NBPF26B4DH59 902 aa11.39□□□□□ -0.59
RN7SL538P-201ENST00000494227 GNPATO15228 680 aa11.39□□□□□ -0.59
RN7SL538P-201ENST00000494227 IGHDP01880 384 aa11.39□□□□□ -0.59
RN7SL538P-201ENST00000494227 MMP10P09238 476 aa11.39□□□□□ -0.59
RN7SL538P-201ENST00000494227 FXR2P51116 673 aaKnown RBP eCLIP11.39□□□□□ -0.59
RN7SL538P-201ENST00000494227 NBPF10Q6P3W6 841 aaKnown RBP11.39□□□□□ -0.59
RN7SL538P-201ENST00000494227 TIAM2Q8IVF5 1701 aa11.39□□□□□ -0.59
RN7SL538P-201ENST00000494227 DNAJC10Q8IXB1 793 aa11.39□□□□□ -0.59
RN7SL538P-201ENST00000494227 NBPF15Q8N660 670 aa11.39□□□□□ -0.59
RN7SL538P-201ENST00000494227 DDX21Q9NR30 783 aaKnown RBP eCLIP11.39□□□□□ -0.59
RN7SL538P-201ENST00000494227 ZBTB40Q9NUA8 1239 aa11.39□□□□□ -0.59
RN7SL538P-201ENST00000494227 DBF4Q9UBU7 674 aaPredicted RBP11.39□□□□□ -0.59
RN7SL538P-201ENST00000494227 ZNF831Q5JPB2 1677 aa11.39□□□□□ -0.59
RN7SL538P-201ENST00000494227 SBF1O95248 1867 aa11.38□□□□□ -0.59
RN7SL538P-201ENST00000494227 LOC102724428A0A0B4J2F2 783 aa11.38□□□□□ -0.59
RN7SL538P-201ENST00000494227 A1BGP04217 495 aa11.38□□□□□ -0.59
RN7SL538P-201ENST00000494227 SSFA2P28290 1259 aa11.38□□□□□ -0.59
RN7SL538P-201ENST00000494227 SIK1P57059 783 aa11.38□□□□□ -0.59
RN7SL538P-201ENST00000494227 FKBP5Q13451 457 aaPredicted RBP11.38□□□□□ -0.59
RN7SL538P-201ENST00000494227 COL13A1Q5TAT6 717 aaPredicted RBP11.38□□□□□ -0.59
RN7SL538P-201ENST00000494227 DDX19BQ9UMR2 479 aa11.38□□□□□ -0.59
RN7SL538P-201ENST00000494227 MYL6BP14649 208 aa11.37□□□□□ -0.59
RN7SL538P-201ENST00000494227 APLP1P51693 650 aa11.37□□□□□ -0.59
RN7SL538P-201ENST00000494227 SLC4A10Q6U841 1118 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms