RNA–Protein interactions for RNA: ENST00000494187.1

MINDY4-203, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 3,573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-203ENST00000494187 CPSF1Q10570 1443 aaKnown RBP11.2□□□□□ -0.62
MINDY4-203ENST00000494187 GUCY1B3Q02153 619 aa11.2□□□□□ -0.62
MINDY4-203ENST00000494187 KIAA0232Q92628 1395 aa11.19□□□□□ -0.62
MINDY4-203ENST00000494187 PPLO60437 1756 aa11.19□□□□□ -0.62
MINDY4-203ENST00000494187 SNRPA1P09661 255 aaKnown RBP11.19□□□□□ -0.62
MINDY4-203ENST00000494187 FAM227BQ96M60 508 aa11.19□□□□□ -0.62
MINDY4-203ENST00000494187 USP26Q9BXU7 913 aa11.19□□□□□ -0.62
MINDY4-203ENST00000494187 HYPKQ9NX55 129 aa11.19□□□□□ -0.62
MINDY4-203ENST00000494187 SLAIN2Q9P270 581 aa11.19□□□□□ -0.62
MINDY4-203ENST00000494187 SMIM5Q71RC9 77 aa11.19□□□□□ -0.62
MINDY4-203ENST00000494187 SIRT1Q96EB6 747 aa11.19□□□□□ -0.62
MINDY4-203ENST00000494187 ESYT1Q9BSJ8 1104 aa11.19□□□□□ -0.62
MINDY4-203ENST00000494187 AATKQ6ZMQ8 1374 aa11.19□□□□□ -0.62
MINDY4-203ENST00000494187 MAP2P11137 1827 aaKnown RBP11.18□□□□□ -0.62
MINDY4-203ENST00000494187 TMEM131LA2VDJ0 1609 aa11.18□□□□□ -0.62
MINDY4-203ENST00000494187 CHGBP05060 677 aa11.18□□□□□ -0.62
MINDY4-203ENST00000494187 CCDC57Q2TAC2 916 aa11.18□□□□□ -0.62
MINDY4-203ENST00000494187 TLR7Q9NYK1 1049 aaKnown RBP11.18□□□□□ -0.62
MINDY4-203ENST00000494187 HDAC5Q9UQL6 1122 aa11.18□□□□□ -0.62
MINDY4-203ENST00000494187 SETBP1Q9Y6X0 1596 aa11.18□□□□□ -0.62
MINDY4-203ENST00000494187 RRP12Q5JTH9 1297 aaKnown RBP11.18□□□□□ -0.62
MINDY4-203ENST00000494187 MYOM1P52179 1685 aa11.18□□□□□ -0.62
MINDY4-203ENST00000494187 H3BQV1 296 aa11.18□□□□□ -0.62
MINDY4-203ENST00000494187 IFFO2Q5TF58 517 aa11.18□□□□□ -0.62
MINDY4-203ENST00000494187 CCDC82Q8N4S0 544 aa11.18□□□□□ -0.62
MINDY4-203ENST00000494187 TMX3Q96JJ7 454 aa11.18□□□□□ -0.62
MINDY4-203ENST00000494187 ZC3H13Q5T200 1668 aaKnown RBP11.17□□□□□ -0.62
MINDY4-203ENST00000494187 IDH1O75874 414 aaKnown RBP11.17□□□□□ -0.62
MINDY4-203ENST00000494187 CHMLP26374 656 aa11.17□□□□□ -0.62
MINDY4-203ENST00000494187 TFCP2Q12800 502 aa11.17□□□□□ -0.62
MINDY4-203ENST00000494187 FAM184AQ8NB25 1140 aa11.17□□□□□ -0.62
MINDY4-203ENST00000494187 ECHDC1Q9NTX5 307 aa11.17□□□□□ -0.62
MINDY4-203ENST00000494187 LAMC1P11047 1609 aa11.17□□□□□ -0.62
MINDY4-203ENST00000494187 ATP2B1P20020 1258 aa11.17□□□□□ -0.62
MINDY4-203ENST00000494187 FAM173BQ6P4H8 233 aa11.17□□□□□ -0.62
MINDY4-203ENST00000494187 GLRX3O76003 335 aaKnown RBP11.17□□□□□ -0.62
MINDY4-203ENST00000494187 SYNE4Q8N205 404 aa11.17□□□□□ -0.62
MINDY4-203ENST00000494187 TFIP11Q9UBB9 837 aaKnown RBP11.17□□□□□ -0.62
MINDY4-203ENST00000494187 GNL2Q13823 731 aaKnown RBP11.16□□□□□ -0.62
MINDY4-203ENST00000494187 KIF6Q6ZMV9 814 aa11.16□□□□□ -0.62
MINDY4-203ENST00000494187 DNAJC10Q8IXB1 793 aa11.16□□□□□ -0.62
MINDY4-203ENST00000494187 JAG2Q9Y219 1238 aa11.16□□□□□ -0.62
MINDY4-203ENST00000494187 RAB11FIP3O75154 756 aa11.16□□□□□ -0.62
MINDY4-203ENST00000494187 CCT2P78371 535 aaKnown RBP11.16□□□□□ -0.62
MINDY4-203ENST00000494187 SEC62Q99442 399 aaKnown RBP11.16□□□□□ -0.62
MINDY4-203ENST00000494187 CEP126Q9P2H0 1117 aa11.16□□□□□ -0.62
MINDY4-203ENST00000494187 TRMT112Q9UI30 125 aaKnown RBP11.16□□□□□ -0.62
MINDY4-203ENST00000494187 ASAP1Q9ULH1 1129 aa11.16□□□□□ -0.62
MINDY4-203ENST00000494187 SYCE3A1L190 88 aa11.16□□□□□ -0.62
MINDY4-203ENST00000494187 CYP27B1O15528 508 aa11.16□□□□□ -0.62
MINDY4-203ENST00000494187 NUCB2P80303 420 aa11.16□□□□□ -0.62
MINDY4-203ENST00000494187 LINS1Q8NG48 757 aa11.16□□□□□ -0.62
MINDY4-203ENST00000494187 DBNDD2Q9BQY9 259 aa11.16□□□□□ -0.62
MINDY4-203ENST00000494187 SLC52A2Q9HAB3 445 aa11.16□□□□□ -0.62
MINDY4-203ENST00000494187 DDX21Q9NR30 783 aaKnown RBP eCLIP11.16□□□□□ -0.62
MINDY4-203ENST00000494187 BEND3Q5T5X7 828 aa11.15□□□□□ -0.62
MINDY4-203ENST00000494187 PDRG1Q9NUG6 133 aa11.15□□□□□ -0.62
MINDY4-203ENST00000494187 PIBF1Q8WXW3 757 aa11.15□□□□□ -0.62
MINDY4-203ENST00000494187 EAF2Q96CJ1 260 aaPredicted RBP11.15□□□□□ -0.62
MINDY4-203ENST00000494187 ERBB3P21860 1342 aa11.15□□□□□ -0.63
MINDY4-203ENST00000494187 ARHGEF28Q8N1W1 1705 aaKnown RBP11.15□□□□□ -0.63
MINDY4-203ENST00000494187 EXOC5O00471 708 aa11.15□□□□□ -0.63
MINDY4-203ENST00000494187 PHKG2P15735 406 aa11.15□□□□□ -0.63
MINDY4-203ENST00000494187 DRC7Q8IY82 874 aa11.15□□□□□ -0.63
MINDY4-203ENST00000494187 ABCF2Q9UG63 623 aa11.15□□□□□ -0.63
MINDY4-203ENST00000494187 WWC3Q9ULE0 1092 aa11.15□□□□□ -0.63
MINDY4-203ENST00000494187 ARHGEF10O15013 1369 aa11.14□□□□□ -0.63
MINDY4-203ENST00000494187 SNAP23O00161 211 aa11.14□□□□□ -0.63
MINDY4-203ENST00000494187 BAG4O95429 457 aaKnown RBP11.14□□□□□ -0.63
MINDY4-203ENST00000494187 NMIQ13287 307 aaPredicted RBP11.14□□□□□ -0.63
MINDY4-203ENST00000494187 METTL24Q5JXM2 366 aa11.14□□□□□ -0.63
MINDY4-203ENST00000494187 EPHA10Q5JZY3 1008 aa11.14□□□□□ -0.63
MINDY4-203ENST00000494187 TTC39AQ5SRH9 613 aa11.14□□□□□ -0.63
MINDY4-203ENST00000494187 NGLY1Q96IV0 654 aa11.14□□□□□ -0.63
MINDY4-203ENST00000494187 CYP46A1Q9Y6A2 500 aa11.14□□□□□ -0.63
MINDY4-203ENST00000494187 CDK12Q9NYV4 1490 aaPredicted RBP11.14□□□□□ -0.63
MINDY4-203ENST00000494187 PRIM1P49642 420 aaKnown RBP11.14□□□□□ -0.63
MINDY4-203ENST00000494187 C8orf37Q96NL8 207 aa11.14□□□□□ -0.63
MINDY4-203ENST00000494187 RICTORQ6R327 1708 aa11.14□□□□□ -0.63
MINDY4-203ENST00000494187 HTATSF1O43719 755 aaKnown RBP11.13□□□□□ -0.63
MINDY4-203ENST00000494187 IL2RBP14784 551 aa11.13□□□□□ -0.63
MINDY4-203ENST00000494187 CAMK4Q16566 473 aa11.13□□□□□ -0.63
MINDY4-203ENST00000494187 MEX3CQ5U5Q3 659 aaKnown RBP11.13□□□□□ -0.63
MINDY4-203ENST00000494187 VPS37DQ86XT2 251 aa11.13□□□□□ -0.63
MINDY4-203ENST00000494187 CCDC144CPQ8IYA2 1237 aa11.13□□□□□ -0.63
MINDY4-203ENST00000494187 HCLS1P14317 486 aaPredicted RBP11.13□□□□□ -0.63
MINDY4-203ENST00000494187 BLOC1S2Q6QNY1 142 aa11.13□□□□□ -0.63
MINDY4-203ENST00000494187 LDHAL6AQ6ZMR3 332 aa11.13□□□□□ -0.63
MINDY4-203ENST00000494187 PHF14O94880 888 aa11.13□□□□□ -0.63
MINDY4-203ENST00000494187 IFIT1P09914 478 aaKnown RBP11.13□□□□□ -0.63
MINDY4-203ENST00000494187 NPHP4O75161 1426 aaPredicted RBP11.13□□□□□ -0.63
MINDY4-203ENST00000494187 IQSEC2Q5JU85 1478 aa11.13□□□□□ -0.63
MINDY4-203ENST00000494187 PTH1RQ03431 593 aa11.12□□□□□ -0.63
MINDY4-203ENST00000494187 LARP1BQ659C4 914 aaKnown RBP11.12□□□□□ -0.63
MINDY4-203ENST00000494187 BICD2Q8TD16 824 aa11.12□□□□□ -0.63
MINDY4-203ENST00000494187 IL25Q9H293 177 aa11.12□□□□□ -0.63
MINDY4-203ENST00000494187 ZRSR1Q15695 479 aaKnown RBP11.12□□□□□ -0.63
MINDY4-203ENST00000494187 ERC1Q8IUD2 1116 aa11.12□□□□□ -0.63
MINDY4-203ENST00000494187 RASEFQ8IZ41 740 aa11.12□□□□□ -0.63
MINDY4-203ENST00000494187 DCAF5Q96JK2 942 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms