RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 GGA1Q9UJY5 639 aa4.25□□□□□ -1.73
CDC42EP3-205ENST00000494083 GALNT6Q8NCL4 622 aa4.25□□□□□ -1.73
CDC42EP3-205ENST00000494083 BACH1O14867 736 aa4.25□□□□□ -1.73
CDC42EP3-205ENST00000494083 MAP3K10Q02779 954 aa4.25□□□□□ -1.73
CDC42EP3-205ENST00000494083 RASSF7Q02833 373 aa4.25□□□□□ -1.73
CDC42EP3-205ENST00000494083 KCTD17Q8N5Z5 321 aa4.25□□□□□ -1.73
CDC42EP3-205ENST00000494083 ATXN7O15265 892 aaPredicted RBP4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 OIP5O43482 229 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 BCRP11274 1271 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 HOXB4P17483 251 aaPredicted RBP4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 ATP1A2P50993 1020 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 TNP2Q05952 138 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 TRIM50Q86XT4 487 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 LARGE2Q8N3Y3 721 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 NEDD1Q8NHV4 660 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 USP17L15C9J2P7 530 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 USP17L10C9JJH3 530 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 USP17L13C9JLJ4 530 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 USP17L12C9JPN9 530 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 USP17L11C9JVI0 530 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 USP17L21D6R901 530 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 USP17L18D6R9N7 530 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 USP17L22D6RA61 530 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 USP17L17D6RBQ6 530 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 USP17L19D6RCP7 530 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 USP17L20D6RJB6 530 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 USP17L24Q0WX57 530 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 PCDHGC4Q9Y5F7 938 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 SERTM1A2A2V5 107 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 TATP17735 454 aaPredicted RBP4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 FCHSD1Q86WN1 690 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 SCG3Q8WXD2 468 aaKnown RBP4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 NGLY1Q96IV0 654 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 ARXQ96QS3 562 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 CFHR5Q9BXR6 569 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 PHACTR1Q9C0D0 580 aa4.24□□□□□ -1.73
CDC42EP3-205ENST00000494083 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.23□□□□□ -1.73
CDC42EP3-205ENST00000494083 PPP1R12BO60237 982 aaPredicted RBP4.23□□□□□ -1.73
CDC42EP3-205ENST00000494083 PSMA6P60900 246 aaKnown RBP4.23□□□□□ -1.73
CDC42EP3-205ENST00000494083 ZDHHC3Q9NYG2 299 aa4.23□□□□□ -1.73
CDC42EP3-205ENST00000494083 EFSO43281 561 aa4.23□□□□□ -1.73
CDC42EP3-205ENST00000494083 LZTS3O60299 673 aaPredicted RBP4.23□□□□□ -1.73
CDC42EP3-205ENST00000494083 ITGB2P05107 769 aa4.23□□□□□ -1.73
CDC42EP3-205ENST00000494083 TEAD4Q15561 434 aa4.23□□□□□ -1.73
CDC42EP3-205ENST00000494083 GDF11O95390 407 aa4.23□□□□□ -1.73
CDC42EP3-205ENST00000494083 SFSWAPQ12872 951 aaKnown RBP4.23□□□□□ -1.73
CDC42EP3-205ENST00000494083 HINFPQ9BQA5 517 aa4.23□□□□□ -1.73
CDC42EP3-205ENST00000494083 DNMT3AQ9Y6K1 912 aaPredicted RBP4.23□□□□□ -1.73
CDC42EP3-205ENST00000494083 KCNMA1Q12791 1236 aa4.22□□□□□ -1.73
CDC42EP3-205ENST00000494083 NLRP8Q86W28 1048 aa4.22□□□□□ -1.73
CDC42EP3-205ENST00000494083 C1orf216Q8TAB5 229 aa4.22□□□□□ -1.73
CDC42EP3-205ENST00000494083 STK32AQ8WU08 396 aa4.22□□□□□ -1.73
CDC42EP3-205ENST00000494083 GJA3Q9Y6H8 435 aa4.22□□□□□ -1.73
CDC42EP3-205ENST00000494083 E9PCH4 1651 aa4.22□□□□□ -1.73
CDC42EP3-205ENST00000494083 GCC2Q8IWJ2 1684 aa4.22□□□□□ -1.73
CDC42EP3-205ENST00000494083 SEC13P55735 322 aa4.22□□□□□ -1.73
CDC42EP3-205ENST00000494083 ALDH16A1Q8IZ83 802 aa4.22□□□□□ -1.73
CDC42EP3-205ENST00000494083 RHPN1Q8TCX5 695 aa4.22□□□□□ -1.73
CDC42EP3-205ENST00000494083 SLC30A3Q99726 388 aa4.22□□□□□ -1.73
CDC42EP3-205ENST00000494083 C2orf49Q9BVC5 232 aaPredicted RBP4.22□□□□□ -1.73
CDC42EP3-205ENST00000494083 PHF24Q9UPV7 400 aa4.22□□□□□ -1.73
CDC42EP3-205ENST00000494083 CTTNBP2Q8WZ74 1663 aa4.22□□□□□ -1.73
CDC42EP3-205ENST00000494083 COL8A1P27658 744 aa4.22□□□□□ -1.73
CDC42EP3-205ENST00000494083 LBRQ14739 615 aaKnown RBP4.22□□□□□ -1.73
CDC42EP3-205ENST00000494083 POTEAQ6S8J7 498 aa4.22□□□□□ -1.73
CDC42EP3-205ENST00000494083 CAPN12Q6ZSI9 719 aa4.22□□□□□ -1.73
CDC42EP3-205ENST00000494083 EDARADDQ8WWZ3 215 aa4.22□□□□□ -1.73
CDC42EP3-205ENST00000494083 SUV39H2Q9H5I1 410 aa4.22□□□□□ -1.73
CDC42EP3-205ENST00000494083 ZMIZ1Q9ULJ6 1067 aa4.22□□□□□ -1.73
CDC42EP3-205ENST00000494083 BCS1LQ9Y276 419 aa4.22□□□□□ -1.73
CDC42EP3-205ENST00000494083 HMGXB3Q12766 1538 aa4.22□□□□□ -1.73
CDC42EP3-205ENST00000494083 FAM157BP0CG42 384 aa4.21□□□□□ -1.73
CDC42EP3-205ENST00000494083 MARSP56192 900 aaKnown RBP4.21□□□□□ -1.73
CDC42EP3-205ENST00000494083 TYRO3Q06418 890 aa4.21□□□□□ -1.73
CDC42EP3-205ENST00000494083 FIGNL1Q6PIW4 674 aa4.21□□□□□ -1.73
CDC42EP3-205ENST00000494083 RRAGCQ9HB90 399 aa4.21□□□□□ -1.73
CDC42EP3-205ENST00000494083 VIRMAQ69YN4 1812 aaKnown RBP4.21□□□□□ -1.73
CDC42EP3-205ENST00000494083 FAM196BA6NMK8 535 aa4.21□□□□□ -1.74
CDC42EP3-205ENST00000494083 MAP2K3P46734 347 aa4.21□□□□□ -1.74
CDC42EP3-205ENST00000494083 SLCO4C1Q6ZQN7 724 aa4.21□□□□□ -1.74
CDC42EP3-205ENST00000494083 ANKMY2Q8IV38 441 aa4.21□□□□□ -1.74
CDC42EP3-205ENST00000494083 ATAD2Q6PL18 1390 aa4.21□□□□□ -1.74
CDC42EP3-205ENST00000494083 EPXP11678 715 aa4.21□□□□□ -1.74
CDC42EP3-205ENST00000494083 AMPD1P23109 780 aa4.21□□□□□ -1.74
CDC42EP3-205ENST00000494083 GRNP28799 593 aaKnown RBP4.21□□□□□ -1.74
CDC42EP3-205ENST00000494083 GPAT2Q6NUI2 795 aa4.21□□□□□ -1.74
CDC42EP3-205ENST00000494083 BRD7Q9NPI1 651 aa4.21□□□□□ -1.74
CDC42EP3-205ENST00000494083 KLK14Q9P0G3 267 aa4.2□□□□□ -1.74
CDC42EP3-205ENST00000494083 LARP1Q6PKG0 1096 aaKnown RBP4.2□□□□□ -1.74
CDC42EP3-205ENST00000494083 VRTNQ9H8Y1 702 aa4.2□□□□□ -1.74
CDC42EP3-205ENST00000494083 NSFL1CQ9UNZ2 370 aaKnown RBP4.2□□□□□ -1.74
CDC42EP3-205ENST00000494083 DGKGP49619 791 aa4.2□□□□□ -1.74
CDC42EP3-205ENST00000494083 ZNF468Q5VIY5 522 aaPredicted RBP4.2□□□□□ -1.74
CDC42EP3-205ENST00000494083 GOLGA6L1Q8N7Z2 621 aa4.2□□□□□ -1.74
CDC42EP3-205ENST00000494083 SUSD3Q96L08 255 aa4.2□□□□□ -1.74
CDC42EP3-205ENST00000494083 MARK1Q9P0L2 795 aa4.2□□□□□ -1.74
CDC42EP3-205ENST00000494083 USP20Q9Y2K6 914 aa4.2□□□□□ -1.74
CDC42EP3-205ENST00000494083 SCNN1AP37088 669 aa4.19□□□□□ -1.74
CDC42EP3-205ENST00000494083 HIRAP54198 1017 aaPredicted RBP4.19□□□□□ -1.74
CDC42EP3-205ENST00000494083 SAMD5Q5TGI4 173 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms