RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 C2CD5Q86YS7 1000 aa11.28□□□□□ -0.6
LRCH3-219ENST00000494069 NGEFQ8N5V2 710 aa11.28□□□□□ -0.6
LRCH3-219ENST00000494069 SCN7AQ01118 1682 aa11.27□□□□□ -0.6
LRCH3-219ENST00000494069 SPDYE2BA6NHP3 402 aa11.27□□□□□ -0.61
LRCH3-219ENST00000494069 SPDYE6P0CI01 402 aa11.27□□□□□ -0.61
LRCH3-219ENST00000494069 HLFQ16534 295 aa11.27□□□□□ -0.61
LRCH3-219ENST00000494069 SPDYE2Q495Y8 402 aa11.27□□□□□ -0.61
LRCH3-219ENST00000494069 NPM2Q86SE8 214 aaKnown RBP11.27□□□□□ -0.61
LRCH3-219ENST00000494069 PNISRQ8TF01 805 aaKnown RBP11.27□□□□□ -0.61
LRCH3-219ENST00000494069 SETDB2Q96T68 719 aa11.27□□□□□ -0.61
LRCH3-219ENST00000494069 PNNQ9H307 717 aaKnown RBP11.27□□□□□ -0.61
LRCH3-219ENST00000494069 GPBP1L1Q9HC44 474 aaPredicted RBP11.27□□□□□ -0.61
LRCH3-219ENST00000494069 NEUROD2Q15784 382 aa11.26□□□□□ -0.61
LRCH3-219ENST00000494069 C9orf131Q5VYM1 1079 aa11.26□□□□□ -0.61
LRCH3-219ENST00000494069 PRKRIP1Q9H875 184 aaPredicted RBP11.26□□□□□ -0.61
LRCH3-219ENST00000494069 ADAMTS8Q9UP79 889 aa11.26□□□□□ -0.61
LRCH3-219ENST00000494069 H0YIN7 160 aa11.25□□□□□ -0.61
LRCH3-219ENST00000494069 PRELPP51888 382 aa11.25□□□□□ -0.61
LRCH3-219ENST00000494069 RASSF7Q02833 373 aa11.25□□□□□ -0.61
LRCH3-219ENST00000494069 ZNF622Q969S3 477 aaKnown RBP eCLIP11.25□□□□□ -0.611e-10■■□□□ 11.6
LRCH3-219ENST00000494069 BRIP1Q9BX63 1249 aa11.25□□□□□ -0.61
LRCH3-219ENST00000494069 TSPYL4Q9UJ04 414 aa11.25□□□□□ -0.61
LRCH3-219ENST00000494069 KDM3BQ7LBC6 1761 aa11.25□□□□□ -0.61
LRCH3-219ENST00000494069 ARFGEF1Q9Y6D6 1849 aa11.25□□□□□ -0.61
LRCH3-219ENST00000494069 ANKRD31Q8N7Z5 1873 aa11.24□□□□□ -0.61
LRCH3-219ENST00000494069 SENP3-EIF4A1A0A087X0R7 540 aa11.24□□□□□ -0.61
LRCH3-219ENST00000494069 FAM177BA6PVY3 158 aa11.24□□□□□ -0.61
LRCH3-219ENST00000494069 KIF3CO14782 793 aa11.24□□□□□ -0.61
LRCH3-219ENST00000494069 MYL6BP14649 208 aa11.24□□□□□ -0.61
LRCH3-219ENST00000494069 CHRDL2Q6WN34 429 aa11.24□□□□□ -0.61
LRCH3-219ENST00000494069 TTLL7Q6ZT98 887 aa11.24□□□□□ -0.61
LRCH3-219ENST00000494069 TTLL6Q8N841 843 aa11.24□□□□□ -0.61
LRCH3-219ENST00000494069 CNBD1Q8NA66 436 aa11.24□□□□□ -0.61
LRCH3-219ENST00000494069 RNF181Q9P0P0 153 aa11.24□□□□□ -0.61
LRCH3-219ENST00000494069 TRIM35Q9UPQ4 493 aa11.24□□□□□ -0.61
LRCH3-219ENST00000494069 BCORQ6W2J9 1755 aa11.23□□□□□ -0.61
LRCH3-219ENST00000494069 PDE6BP35913 854 aa11.23□□□□□ -0.61
LRCH3-219ENST00000494069 WDR43Q15061 677 aaKnown RBP eCLIP11.23□□□□□ -0.61
LRCH3-219ENST00000494069 KRT24Q2M2I5 525 aa11.23□□□□□ -0.61
LRCH3-219ENST00000494069 CLEC4GQ6UXB4 293 aa11.23□□□□□ -0.61
LRCH3-219ENST00000494069 RUNDC1Q96C34 613 aa11.23□□□□□ -0.61
LRCH3-219ENST00000494069 NIP7Q9Y221 180 aaKnown RBP eCLIP11.23□□□□□ -0.61
LRCH3-219ENST00000494069 NPHP1O15259 732 aa11.22□□□□□ -0.61
LRCH3-219ENST00000494069 ANXA1P04083 346 aa11.22□□□□□ -0.61
LRCH3-219ENST00000494069 EIF2S2P20042 333 aaKnown RBP11.22□□□□□ -0.61
LRCH3-219ENST00000494069 PROSER3Q2NL68 480 aa11.22□□□□□ -0.61
LRCH3-219ENST00000494069 CCDC184Q52MB2 194 aa11.22□□□□□ -0.61
LRCH3-219ENST00000494069 NBPF5PQ86XG9 351 aaPredicted RBP11.22□□□□□ -0.61
LRCH3-219ENST00000494069 NECTIN2Q92692 538 aa11.22□□□□□ -0.61
LRCH3-219ENST00000494069 NMRK2Q9NPI5 230 aa11.22□□□□□ -0.61
LRCH3-219ENST00000494069 LAMB4A4D0S4 1761 aa11.21□□□□□ -0.61
LRCH3-219ENST00000494069 DLEC1Q9Y238 1755 aa11.21□□□□□ -0.61
LRCH3-219ENST00000494069 COL11A2P13942 1736 aaPredicted RBP11.21□□□□□ -0.61
LRCH3-219ENST00000494069 NFKBIEO00221 500 aa11.21□□□□□ -0.61
LRCH3-219ENST00000494069 C21orf2O43822 256 aa11.21□□□□□ -0.61
LRCH3-219ENST00000494069 SRGNP10124 158 aa11.21□□□□□ -0.61
LRCH3-219ENST00000494069 ST5P78524 1137 aa11.21□□□□□ -0.61
LRCH3-219ENST00000494069 PDIA6Q15084 440 aa11.21□□□□□ -0.61
LRCH3-219ENST00000494069 LRP10Q7Z4F1 713 aa11.21□□□□□ -0.61
LRCH3-219ENST00000494069 ZBTB3Q9H5J0 574 aa11.21□□□□□ -0.61
LRCH3-219ENST00000494069 ZNF652Q9Y2D9 606 aa11.21□□□□□ -0.61
LRCH3-219ENST00000494069 LAS1LQ9Y4W2 734 aaKnown RBP11.21□□□□□ -0.61
LRCH3-219ENST00000494069 MAP3K15Q6ZN16 1313 aa11.2□□□□□ -0.62
LRCH3-219ENST00000494069 CHL1O00533 1208 aa11.2□□□□□ -0.62
LRCH3-219ENST00000494069 GPTP24298 496 aa11.2□□□□□ -0.62
LRCH3-219ENST00000494069 LMOD3Q0VAK6 560 aa11.2□□□□□ -0.62
LRCH3-219ENST00000494069 NUTM1Q86Y26 1132 aa11.2□□□□□ -0.62
LRCH3-219ENST00000494069 SSUH2Q9Y2M2 353 aa11.2□□□□□ -0.62
LRCH3-219ENST00000494069 SBF1O95248 1867 aa11.19□□□□□ -0.62
LRCH3-219ENST00000494069 UBN2Q6ZU65 1347 aa11.19□□□□□ -0.62
LRCH3-219ENST00000494069 ERVV-1B6SEH8 477 aa11.19□□□□□ -0.62
LRCH3-219ENST00000494069 STYK1Q6J9G0 422 aa11.19□□□□□ -0.62
LRCH3-219ENST00000494069 PRPF40BQ6NWY9 871 aaKnown RBP11.19□□□□□ -0.62
LRCH3-219ENST00000494069 TPTE2Q6XPS3 522 aa11.19□□□□□ -0.62
LRCH3-219ENST00000494069 ABCC12Q96J65 1359 aa11.18□□□□□ -0.62
LRCH3-219ENST00000494069 PITPNM1O00562 1244 aa11.18□□□□□ -0.62
LRCH3-219ENST00000494069 APAF1O14727 1248 aa11.18□□□□□ -0.62
LRCH3-219ENST00000494069 RGL2O15211 777 aa11.18□□□□□ -0.62
LRCH3-219ENST00000494069 LMNB1P20700 586 aa11.18□□□□□ -0.62
LRCH3-219ENST00000494069 SUSD4Q5VX71 490 aa11.18□□□□□ -0.62
LRCH3-219ENST00000494069 OLFM4Q6UX06 510 aa11.18□□□□□ -0.62
LRCH3-219ENST00000494069 KIF6Q6ZMV9 814 aa11.18□□□□□ -0.62
LRCH3-219ENST00000494069 CNKSR1Q969H4 720 aa11.18□□□□□ -0.62
LRCH3-219ENST00000494069 MASTLQ96GX5 879 aa11.18□□□□□ -0.62
LRCH3-219ENST00000494069 BABAM1Q9NWV8 329 aa11.18□□□□□ -0.62
LRCH3-219ENST00000494069 PDZRN3Q9UPQ7 1066 aa11.18□□□□□ -0.62
LRCH3-219ENST00000494069 SLX4Q8IY92 1834 aa11.18□□□□□ -0.62
LRCH3-219ENST00000494069 KLRG2A4D1S0 409 aaPredicted RBP11.17□□□□□ -0.62
LRCH3-219ENST00000494069 ZEB1P37275 1124 aaPredicted RBP11.17□□□□□ -0.62
LRCH3-219ENST00000494069 ERFEQ4G0M1 354 aa11.17□□□□□ -0.62
LRCH3-219ENST00000494069 C7orf43Q8WVR3 580 aa11.17□□□□□ -0.62
LRCH3-219ENST00000494069 RRAGCQ9HB90 399 aa11.17□□□□□ -0.62
LRCH3-219ENST00000494069 CEP350Q5VT06 3117 aa11.17□□□□□ -0.62
LRCH3-219ENST00000494069 ERBB4Q15303 1308 aa11.16□□□□□ -0.62
LRCH3-219ENST00000494069 NPR1P16066 1061 aa11.16□□□□□ -0.62
LRCH3-219ENST00000494069 GTF2E1P29083 439 aaPredicted RBP11.16□□□□□ -0.62
LRCH3-219ENST00000494069 AIMP1Q12904 312 aaKnown RBP11.16□□□□□ -0.62
LRCH3-219ENST00000494069 GIGYF2Q6Y7W6 1299 aaKnown RBP11.16□□□□□ -0.62
LRCH3-219ENST00000494069 C3orf67Q6ZVT6 689 aa11.16□□□□□ -0.62
LRCH3-219ENST00000494069 COPS6Q7L5N1 327 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms