RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 KLK14Q9P0G3 267 aa9.92□□□□□ -0.82
SMC2-205ENST00000493955 MZF1P28698 734 aaPredicted RBP9.91□□□□□ -0.82
SMC2-205ENST00000493955 ZAP70P43403 619 aa9.91□□□□□ -0.82
SMC2-205ENST00000493955 USP5P45974 858 aa9.91□□□□□ -0.82
SMC2-205ENST00000493955 GNASQ5JWF2 1037 aa9.91□□□□□ -0.82
SMC2-205ENST00000493955 GJD3Q8N144 294 aa9.91□□□□□ -0.82
SMC2-205ENST00000493955 IFT43Q96FT9 208 aa9.91□□□□□ -0.82
SMC2-205ENST00000493955 POLIQ9UNA4 740 aa9.91□□□□□ -0.82
SMC2-205ENST00000493955 GDF9O60383 454 aa9.9□□□□□ -0.82
SMC2-205ENST00000493955 LDHBP07195 334 aaKnown RBP9.9□□□□□ -0.82
SMC2-205ENST00000493955 SLC27A3Q5K4L6 730 aa9.9□□□□□ -0.82
SMC2-205ENST00000493955 DNM1Q05193 864 aaKnown RBP9.9□□□□□ -0.83
SMC2-205ENST00000493955 EDEM1Q92611 657 aa9.9□□□□□ -0.83
SMC2-205ENST00000493955 GRIP2Q9C0E4 1043 aa9.9□□□□□ -0.83
SMC2-205ENST00000493955 TOR4AQ9NXH8 423 aa9.9□□□□□ -0.83
SMC2-205ENST00000493955 FAM187AA6NFU0 413 aa9.89□□□□□ -0.83
SMC2-205ENST00000493955 TNFRSF10AO00220 468 aa9.89□□□□□ -0.83
SMC2-205ENST00000493955 PRPF40AO75400 957 aaKnown RBP9.89□□□□□ -0.83
SMC2-205ENST00000493955 PDGFAP04085 211 aa9.89□□□□□ -0.83
SMC2-205ENST00000493955 SMPD1P17405 629 aa9.89□□□□□ -0.83
SMC2-205ENST00000493955 TXLNAP40222 546 aa9.89□□□□□ -0.83
SMC2-205ENST00000493955 PLA2G4AP47712 749 aa9.89□□□□□ -0.83
SMC2-205ENST00000493955 MRPL58Q14197 206 aaKnown RBP9.89□□□□□ -0.83
SMC2-205ENST00000493955 TSNAXIP1Q2TAA8 658 aa9.89□□□□□ -0.83
SMC2-205ENST00000493955 RNF144AP50876 292 aaPredicted RBP9.88□□□□□ -0.83
SMC2-205ENST00000493955 PRR20EP86478 221 aa9.88□□□□□ -0.83
SMC2-205ENST00000493955 PRR20CP86479 221 aa9.88□□□□□ -0.83
SMC2-205ENST00000493955 PRR20DP86480 221 aa9.88□□□□□ -0.83
SMC2-205ENST00000493955 PRR20BP86481 221 aa9.88□□□□□ -0.83
SMC2-205ENST00000493955 PRR20AP86496 221 aa9.88□□□□□ -0.83
SMC2-205ENST00000493955 ATP2B2Q01814 1243 aa9.88□□□□□ -0.83
SMC2-205ENST00000493955 TREML1Q86YW5 311 aa9.88□□□□□ -0.83
SMC2-205ENST00000493955 TSEN34Q9BSV6 310 aaKnown RBP9.88□□□□□ -0.83
SMC2-205ENST00000493955 PCSK2P16519 638 aa9.87□□□□□ -0.83
SMC2-205ENST00000493955 ITGAEP38570 1179 aa9.87□□□□□ -0.83
SMC2-205ENST00000493955 XPCQ01831 940 aaPredicted RBP9.87□□□□□ -0.83
SMC2-205ENST00000493955 HIF1AQ16665 826 aa9.87□□□□□ -0.83
SMC2-205ENST00000493955 NBPF1Q3BBV0 1214 aa9.87□□□□□ -0.83
SMC2-205ENST00000493955 C4orf17Q53FE4 359 aa9.87□□□□□ -0.83
SMC2-205ENST00000493955 TREML4Q6UXN2 200 aa9.87□□□□□ -0.83
SMC2-205ENST00000493955 NIF3L1Q9GZT8 377 aa9.87□□□□□ -0.83
SMC2-205ENST00000493955 RHPN1Q8TCX5 695 aa9.86□□□□□ -0.83
SMC2-205ENST00000493955 INSM2Q96T92 566 aaPredicted RBP9.86□□□□□ -0.83
SMC2-205ENST00000493955 ZDHHC3Q9NYG2 299 aa9.86□□□□□ -0.83
SMC2-205ENST00000493955 SPINT1O43278 529 aa9.85□□□□□ -0.83
SMC2-205ENST00000493955 DUSP9Q99956 384 aaKnown RBP9.85□□□□□ -0.83
SMC2-205ENST00000493955 FAM13BQ9NYF5 915 aa9.85□□□□□ -0.83
SMC2-205ENST00000493955 PARP2Q9UGN5 583 aa9.85□□□□□ -0.83
SMC2-205ENST00000493955 PNMA6FA0A0J9YX94 578 aa9.84□□□□□ -0.83
SMC2-205ENST00000493955 TGFBR3LH3BV60 316 aa9.84□□□□□ -0.83
SMC2-205ENST00000493955 ENOX2Q16206 610 aaKnown RBP9.84□□□□□ -0.83
SMC2-205ENST00000493955 LINC00528Q8N1L1 170 aa9.84□□□□□ -0.83
SMC2-205ENST00000493955 GPR152Q8TDT2 470 aa9.84□□□□□ -0.83
SMC2-205ENST00000493955 HPS1Q92902 700 aa9.84□□□□□ -0.83
SMC2-205ENST00000493955 BACH2Q9BYV9 841 aa9.84□□□□□ -0.83
SMC2-205ENST00000493955 MRS2Q9HD23 443 aa9.84□□□□□ -0.83
SMC2-205ENST00000493955 POLMQ9NP87 494 aaPredicted RBP9.84□□□□□ -0.83
SMC2-205ENST00000493955 BCS1LQ9Y276 419 aa9.84□□□□□ -0.83
SMC2-205ENST00000493955 SPATA31C2B4DYI2 1134 aa9.83□□□□□ -0.84
SMC2-205ENST00000493955 ST8SIA5O15466 376 aa9.83□□□□□ -0.84
SMC2-205ENST00000493955 UPP2O95045 317 aa9.83□□□□□ -0.84
SMC2-205ENST00000493955 AIDAQ96BJ3 306 aa9.83□□□□□ -0.84
SMC2-205ENST00000493955 NUDT16Q96DE0 195 aaKnown RBP9.83□□□□□ -0.84
SMC2-205ENST00000493955 WWC3Q9ULE0 1092 aa9.83□□□□□ -0.84
SMC2-205ENST00000493955 GPC6Q9Y625 555 aaPredicted RBP9.83□□□□□ -0.84
SMC2-205ENST00000493955 MICAL2O94851 1124 aa9.82□□□□□ -0.84
SMC2-205ENST00000493955 RPLP1P05386 114 aaKnown RBP9.82□□□□□ -0.84
SMC2-205ENST00000493955 TATP17735 454 aaPredicted RBP9.82□□□□□ -0.84
SMC2-205ENST00000493955 ALG1LQ6GMV1 187 aa9.82□□□□□ -0.84
SMC2-205ENST00000493955 TMC4Q7Z404 712 aa9.82□□□□□ -0.84
SMC2-205ENST00000493955 FAM161BQ96MY7 647 aa9.82□□□□□ -0.84
SMC2-205ENST00000493955 USP35Q9P2H5 1018 aa9.82□□□□□ -0.84
SMC2-205ENST00000493955 DAB2P98082 770 aa9.82□□□□□ -0.84
SMC2-205ENST00000493955 LCE2AQ5TA79 106 aaPredicted RBP9.82□□□□□ -0.84
SMC2-205ENST00000493955 IER5Q5VY09 327 aa9.82□□□□□ -0.84
SMC2-205ENST00000493955 TTC16Q8NEE8 873 aa9.82□□□□□ -0.84
SMC2-205ENST00000493955 C7orf43Q8WVR3 580 aa9.82□□□□□ -0.84
SMC2-205ENST00000493955 SCAMP3O14828 347 aaKnown RBP9.81□□□□□ -0.84
SMC2-205ENST00000493955 SORBS3O60504 671 aa9.81□□□□□ -0.84
SMC2-205ENST00000493955 CTSOP43234 321 aaPredicted RBP9.81□□□□□ -0.84
SMC2-205ENST00000493955 PHKA2P46019 1235 aa9.81□□□□□ -0.84
SMC2-205ENST00000493955 PSMD2Q13200 908 aa9.81□□□□□ -0.84
SMC2-205ENST00000493955 C8orf34Q49A92 452 aa9.81□□□□□ -0.84
SMC2-205ENST00000493955 C8orf37Q96NL8 207 aa9.81□□□□□ -0.84
SMC2-205ENST00000493955 SETDB2Q96T68 719 aa9.81□□□□□ -0.84
SMC2-205ENST00000493955 AAASQ9NRG9 546 aa9.81□□□□□ -0.84
SMC2-205ENST00000493955 CAPN5O15484 640 aaPredicted RBP9.8□□□□□ -0.84
SMC2-205ENST00000493955 FBF1Q8TES7 1133 aa9.8□□□□□ -0.84
SMC2-205ENST00000493955 PIK3R5Q8WYR1 880 aa9.8□□□□□ -0.84
SMC2-205ENST00000493955 SUSD3Q96L08 255 aa9.8□□□□□ -0.84
SMC2-205ENST00000493955 CSRNP1Q96S65 589 aa9.8□□□□□ -0.84
SMC2-205ENST00000493955 NEFLP07196 543 aa9.79□□□□□ -0.84
SMC2-205ENST00000493955 NBPF10Q6P3W6 841 aaKnown RBP9.79□□□□□ -0.84
SMC2-205ENST00000493955 BICDL1Q6ZP65 573 aa9.79□□□□□ -0.84
SMC2-205ENST00000493955 GGNBP2Q9H3C7 697 aa9.79□□□□□ -0.84
SMC2-205ENST00000493955 RNF19AQ9NV58 838 aa9.79□□□□□ -0.84
SMC2-205ENST00000493955 ANKIB1Q9P2G1 1089 aa9.79□□□□□ -0.84
SMC2-205ENST00000493955 VTI1BQ9UEU0 232 aa9.79□□□□□ -0.84
SMC2-205ENST00000493955 ATP4AP20648 1035 aa9.78□□□□□ -0.84
SMC2-205ENST00000493955 IDH3AP50213 366 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms