RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 THEMISQ8N1K5 641 aaPredicted RBP9.28□□□□□ -0.92
TRA2B-216ENST00000493864 CCDC85AQ96PX6 553 aaPredicted RBP9.28□□□□□ -0.92
TRA2B-216ENST00000493864 ATP9BO43861 1147 aa9.27□□□□□ -0.93
TRA2B-216ENST00000493864 NR3C2P08235 984 aa9.27□□□□□ -0.93
TRA2B-216ENST00000493864 RFX1P22670 979 aa9.27□□□□□ -0.93
TRA2B-216ENST00000493864 PLPP7Q8NBV4 271 aa9.27□□□□□ -0.93
TRA2B-216ENST00000493864 NFATC2IPQ8NCF5 419 aa9.27□□□□□ -0.93
TRA2B-216ENST00000493864 DOLKQ9UPQ8 538 aa9.27□□□□□ -0.93
TRA2B-216ENST00000493864 PCDHB11Q9Y5F2 797 aa9.27□□□□□ -0.93
TRA2B-216ENST00000493864 PRAG1Q86YV5 1406 aa9.26□□□□□ -0.93
TRA2B-216ENST00000493864 RIMS2Q9UQ26 1411 aa9.26□□□□□ -0.93
TRA2B-216ENST00000493864 ERVH48-1M5A8F1 160 aa9.26□□□□□ -0.93
TRA2B-216ENST00000493864 SMPD1P17405 629 aa9.26□□□□□ -0.93
TRA2B-216ENST00000493864 LTKP29376 864 aa9.26□□□□□ -0.93
TRA2B-216ENST00000493864 LMOD1P29536 600 aaPredicted RBP9.26□□□□□ -0.93
TRA2B-216ENST00000493864 NNTQ13423 1086 aa9.26□□□□□ -0.93
TRA2B-216ENST00000493864 NBPF1Q3BBV0 1214 aa9.26□□□□□ -0.93
TRA2B-216ENST00000493864 CCDC116Q8IYX3 515 aa9.26□□□□□ -0.93
TRA2B-216ENST00000493864 DEPDC4Q8N2C3 294 aa9.26□□□□□ -0.93
TRA2B-216ENST00000493864 MAFBQ9Y5Q3 323 aaPredicted RBP9.26□□□□□ -0.93
TRA2B-216ENST00000493864 USP17L5A8MUK1 530 aa9.25□□□□□ -0.93
TRA2B-216ENST00000493864 DHX9Q08211 1270 aaKnown RBP9.25□□□□□ -0.93
TRA2B-216ENST00000493864 OXLD1Q5BKU9 147 aa9.25□□□□□ -0.93
TRA2B-216ENST00000493864 CFAP70Q5T0N1 1121 aa9.25□□□□□ -0.93
TRA2B-216ENST00000493864 TXNDC2Q86VQ3 553 aa9.25□□□□□ -0.93
TRA2B-216ENST00000493864 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.25□□□□□ -0.93
TRA2B-216ENST00000493864 TMPRSS4Q9NRS4 437 aa9.25□□□□□ -0.93
TRA2B-216ENST00000493864 IQGAP1P46940 1657 aa9.25□□□□□ -0.93
TRA2B-216ENST00000493864 NEXMIFQ5QGS0 1516 aa9.25□□□□□ -0.93
TRA2B-216ENST00000493864 TMEM2Q9UHN6 1383 aa9.24□□□□□ -0.93
TRA2B-216ENST00000493864 STRCP1A6NGW2 1772 aa9.24□□□□□ -0.93
TRA2B-216ENST00000493864 USP17L3A6NCW0 530 aa9.24□□□□□ -0.93
TRA2B-216ENST00000493864 USP17L4A6NCW7 530 aa9.24□□□□□ -0.93
TRA2B-216ENST00000493864 MAP7D1Q3KQU3 841 aa9.24□□□□□ -0.93
TRA2B-216ENST00000493864 PPP1R26Q5T8A7 1209 aaPredicted RBP9.24□□□□□ -0.93
TRA2B-216ENST00000493864 USP17L2Q6R6M4 530 aa9.24□□□□□ -0.93
TRA2B-216ENST00000493864 USP17L1Q7RTZ2 530 aa9.24□□□□□ -0.93
TRA2B-216ENST00000493864 CDCA7Q9BWT1 371 aaPredicted RBP9.24□□□□□ -0.93
TRA2B-216ENST00000493864 PPLO60437 1756 aa9.24□□□□□ -0.93
TRA2B-216ENST00000493864 LTBP4Q8N2S1 1624 aa9.23□□□□□ -0.93
TRA2B-216ENST00000493864 ZFYVE9O95405 1425 aa9.23□□□□□ -0.93
TRA2B-216ENST00000493864 MYOM2P54296 1465 aa9.23□□□□□ -0.93
TRA2B-216ENST00000493864 IFT172Q9UG01 1749 aa9.23□□□□□ -0.93
TRA2B-216ENST00000493864 NCOA4Q13772 614 aa9.23□□□□□ -0.93
TRA2B-216ENST00000493864 TRAF7Q6Q0C0 670 aa9.23□□□□□ -0.93
TRA2B-216ENST00000493864 CCDC125Q86Z20 511 aa9.23□□□□□ -0.93
TRA2B-216ENST00000493864 C14orf93Q9H972 538 aaKnown RBP9.23□□□□□ -0.93
TRA2B-216ENST00000493864 EID1Q9Y6B2 187 aa9.23□□□□□ -0.93
TRA2B-216ENST00000493864 NRXN1Q9ULB1 1477 aa9.22□□□□□ -0.93
TRA2B-216ENST00000493864 GFRA3O60609 400 aa9.22□□□□□ -0.93
TRA2B-216ENST00000493864 TMEM132EQ6IEE7 984 aa9.22□□□□□ -0.93
TRA2B-216ENST00000493864 HIRIP3Q9BW71 556 aaPredicted RBP9.22□□□□□ -0.93
TRA2B-216ENST00000493864 CARD11Q9BXL7 1154 aa9.22□□□□□ -0.93
TRA2B-216ENST00000493864 EMILIN1Q9Y6C2 1016 aa9.22□□□□□ -0.93
TRA2B-216ENST00000493864 ZNF335Q9H4Z2 1342 aaPredicted RBP9.22□□□□□ -0.93
TRA2B-216ENST00000493864 KDM5AP29375 1690 aaKnown RBP9.22□□□□□ -0.93
TRA2B-216ENST00000493864 ARHGAP23Q9P227 1491 aa9.21□□□□□ -0.93
TRA2B-216ENST00000493864 FAM187AA6NFU0 413 aa9.21□□□□□ -0.94
TRA2B-216ENST00000493864 EML3Q32P44 896 aa9.21□□□□□ -0.94
TRA2B-216ENST00000493864 ANKLE2Q86XL3 938 aa9.21□□□□□ -0.94
TRA2B-216ENST00000493864 PLEKHM2Q8IWE5 1019 aa9.21□□□□□ -0.94
TRA2B-216ENST00000493864 ZNF784Q8NCA9 323 aaPredicted RBP9.21□□□□□ -0.94
TRA2B-216ENST00000493864 HPS1Q92902 700 aa9.21□□□□□ -0.94
TRA2B-216ENST00000493864 CYLDQ9NQC7 956 aa9.21□□□□□ -0.94
TRA2B-216ENST00000493864 PGPEP1Q9NXJ5 209 aa9.21□□□□□ -0.94
TRA2B-216ENST00000493864 RALGAPBQ86X10 1494 aa9.21□□□□□ -0.94
TRA2B-216ENST00000493864 HSPA5P11021 654 aaKnown RBP9.2□□□□□ -0.94
TRA2B-216ENST00000493864 SCTRP47872 440 aa9.2□□□□□ -0.94
TRA2B-216ENST00000493864 WDR4P57081 412 aaKnown RBP9.2□□□□□ -0.94
TRA2B-216ENST00000493864 ROCK2O75116 1388 aaKnown RBP9.2□□□□□ -0.94
TRA2B-216ENST00000493864 PIK3C2GO75747 1445 aa9.2□□□□□ -0.94
TRA2B-216ENST00000493864 SLIT1O75093 1534 aa9.2□□□□□ -0.94
TRA2B-216ENST00000493864 TRPM1Q7Z4N2 1603 aa9.2□□□□□ -0.94
TRA2B-216ENST00000493864 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.19□□□□□ -0.94
TRA2B-216ENST00000493864 LZTS3O60299 673 aaPredicted RBP9.19□□□□□ -0.94
TRA2B-216ENST00000493864 ZIC2O95409 532 aaPredicted RBP9.19□□□□□ -0.94
TRA2B-216ENST00000493864 MYT1Q01538 1121 aa9.19□□□□□ -0.94
TRA2B-216ENST00000493864 USP4Q13107 963 aa9.19□□□□□ -0.94
TRA2B-216ENST00000493864 CDCA8Q53HL2 280 aa9.19□□□□□ -0.94
TRA2B-216ENST00000493864 ITPKCQ96DU7 683 aa9.19□□□□□ -0.94
TRA2B-216ENST00000493864 SLC26A8Q96RN1 970 aa9.19□□□□□ -0.94
TRA2B-216ENST00000493864 NPHP4O75161 1426 aaPredicted RBP9.19□□□□□ -0.94
TRA2B-216ENST00000493864 XIRP1Q702N8 1843 aaKnown RBP9.19□□□□□ -0.94
TRA2B-216ENST00000493864 MED14O60244 1454 aa9.18□□□□□ -0.94
TRA2B-216ENST00000493864 MYCP01106 439 aaPredicted RBP9.18□□□□□ -0.94
TRA2B-216ENST00000493864 GPRASP1Q5JY77 1395 aa9.18□□□□□ -0.94
TRA2B-216ENST00000493864 CC2D2BQ6DHV5 1058 aa9.18□□□□□ -0.94
TRA2B-216ENST00000493864 SCAF11Q99590 1463 aaKnown RBP9.18□□□□□ -0.94
TRA2B-216ENST00000493864 ZFAND3Q9H8U3 227 aa9.18□□□□□ -0.94
TRA2B-216ENST00000493864 STK26Q9P289 416 aa9.18□□□□□ -0.94
TRA2B-216ENST00000493864 MKRN1Q9UHC7 482 aaKnown RBP9.18□□□□□ -0.94
TRA2B-216ENST00000493864 PLEKHG1Q9ULL1 1385 aa9.18□□□□□ -0.94
TRA2B-216ENST00000493864 NOD1Q9Y239 953 aa9.18□□□□□ -0.94
TRA2B-216ENST00000493864 NRG2O14511 850 aaPredicted RBP9.17□□□□□ -0.94
TRA2B-216ENST00000493864 TIMP2P16035 220 aa9.17□□□□□ -0.94
TRA2B-216ENST00000493864 ERVK-9P63128 1117 aa9.17□□□□□ -0.94
TRA2B-216ENST00000493864 FBXO41Q8TF61 875 aa9.17□□□□□ -0.94
TRA2B-216ENST00000493864 SIRT1Q96EB6 747 aa9.17□□□□□ -0.94
TRA2B-216ENST00000493864 KLF16Q9BXK1 252 aaPredicted RBP9.17□□□□□ -0.94
TRA2B-216ENST00000493864 VRTNQ9H8Y1 702 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms