RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 RGL2O15211 777 aa9.68□□□□□ -0.86
VEGFA-214ENST00000493786 IPO8O15397 1037 aaKnown RBP9.68□□□□□ -0.86
VEGFA-214ENST00000493786 CAMTA2O94983 1202 aa9.68□□□□□ -0.86
VEGFA-214ENST00000493786 HSP90AB3PQ58FF7 597 aa9.68□□□□□ -0.86
VEGFA-214ENST00000493786 CLEC4GQ6UXB4 293 aa9.68□□□□□ -0.86
VEGFA-214ENST00000493786 TTLL7Q6ZT98 887 aa9.68□□□□□ -0.86
VEGFA-214ENST00000493786 ANKRD13DQ6ZTN6 518 aa9.68□□□□□ -0.86
VEGFA-214ENST00000493786 NLGN1Q8N2Q7 840 aa9.68□□□□□ -0.86
VEGFA-214ENST00000493786 MRPL50Q8N5N7 158 aaKnown RBP9.68□□□□□ -0.86
VEGFA-214ENST00000493786 PLBD2Q8NHP8 589 aa9.68□□□□□ -0.86
VEGFA-214ENST00000493786 SRP68Q9UHB9 627 aaKnown RBP9.68□□□□□ -0.86
VEGFA-214ENST00000493786 NPHP1O15259 732 aa9.67□□□□□ -0.86
VEGFA-214ENST00000493786 POLD1P28340 1107 aa9.67□□□□□ -0.86
VEGFA-214ENST00000493786 NEXNQ0ZGT2 675 aa9.67□□□□□ -0.86
VEGFA-214ENST00000493786 MSL1Q68DK7 614 aa9.67□□□□□ -0.86
VEGFA-214ENST00000493786 KSR2Q6VAB6 950 aa9.67□□□□□ -0.86
VEGFA-214ENST00000493786 LRP10Q7Z4F1 713 aa9.67□□□□□ -0.86
VEGFA-214ENST00000493786 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.67□□□□□ -0.86
VEGFA-214ENST00000493786 FRAT1Q92837 279 aaPredicted RBP9.67□□□□□ -0.86
VEGFA-214ENST00000493786 API5Q9BZZ5 524 aaKnown RBP9.67□□□□□ -0.86
VEGFA-214ENST00000493786 MTFR1LQ9H019 292 aa9.67□□□□□ -0.86
VEGFA-214ENST00000493786 QSER1Q2KHR3 1735 aa9.67□□□□□ -0.86
VEGFA-214ENST00000493786 TUBGCP6Q96RT7 1819 aa9.66□□□□□ -0.86
VEGFA-214ENST00000493786 PI4KAP2A4QPH2 592 aa9.66□□□□□ -0.86
VEGFA-214ENST00000493786 BCAR3O75815 825 aa9.66□□□□□ -0.86
VEGFA-214ENST00000493786 ZBTB7AO95365 584 aa9.66□□□□□ -0.86
VEGFA-214ENST00000493786 CENPBP07199 599 aaPredicted RBP9.66□□□□□ -0.86
VEGFA-214ENST00000493786 GYS1P13807 737 aa9.66□□□□□ -0.86
VEGFA-214ENST00000493786 BRPF1P55201 1214 aaPredicted RBP9.66□□□□□ -0.86
VEGFA-214ENST00000493786 GIGYF2Q6Y7W6 1299 aaKnown RBP9.66□□□□□ -0.86
VEGFA-214ENST00000493786 BICDL1Q6ZP65 573 aa9.66□□□□□ -0.86
VEGFA-214ENST00000493786 G2E3Q7L622 706 aa9.66□□□□□ -0.86
VEGFA-214ENST00000493786 PI4KAP1Q8N8J0 262 aa9.66□□□□□ -0.86
VEGFA-214ENST00000493786 NOB1Q9ULX3 412 aaKnown RBP9.66□□□□□ -0.86
VEGFA-214ENST00000493786 MAP3K2Q9Y2U5 619 aa9.66□□□□□ -0.86
VEGFA-214ENST00000493786 FKBP8Q14318 412 aa9.65□□□□□ -0.86
VEGFA-214ENST00000493786 ZKSCAN2Q63HK3 967 aa9.65□□□□□ -0.86
VEGFA-214ENST00000493786 DNAAF4Q8WXU2 420 aa9.65□□□□□ -0.86
VEGFA-214ENST00000493786 SETDB2Q96T68 719 aa9.65□□□□□ -0.86
VEGFA-214ENST00000493786 MYD88Q99836 296 aa9.65□□□□□ -0.86
VEGFA-214ENST00000493786 NIP7Q9Y221 180 aaKnown RBP eCLIP9.65□□□□□ -0.86
VEGFA-214ENST00000493786 PARP3Q9Y6F1 533 aa9.65□□□□□ -0.86
VEGFA-214ENST00000493786 SCN7AQ01118 1682 aa9.64□□□□□ -0.87
VEGFA-214ENST00000493786 CARMIL3Q8ND23 1372 aa9.64□□□□□ -0.87
VEGFA-214ENST00000493786 MMP10P09238 476 aa9.64□□□□□ -0.87
VEGFA-214ENST00000493786 MS4A1P11836 297 aa9.64□□□□□ -0.87
VEGFA-214ENST00000493786 TCIRG1Q13488 830 aa9.64□□□□□ -0.87
VEGFA-214ENST00000493786 HLFQ16534 295 aa9.64□□□□□ -0.87
VEGFA-214ENST00000493786 PARP10Q53GL7 1025 aa9.64□□□□□ -0.87
VEGFA-214ENST00000493786 TBC1D9BQ66K14 1250 aa9.64□□□□□ -0.87
VEGFA-214ENST00000493786 SLC4A10Q6U841 1118 aa9.64□□□□□ -0.87
VEGFA-214ENST00000493786 FTSJ3Q8IY81 847 aaKnown RBP9.64□□□□□ -0.87
VEGFA-214ENST00000493786 ARHGAP45Q92619 1136 aa9.64□□□□□ -0.87
VEGFA-214ENST00000493786 METTL22Q9BUU2 404 aaPredicted RBP9.64□□□□□ -0.87
VEGFA-214ENST00000493786 PDGFDQ9GZP0 370 aaPredicted RBP9.64□□□□□ -0.87
VEGFA-214ENST00000493786 SPON1Q9HCB6 807 aa9.64□□□□□ -0.87
VEGFA-214ENST00000493786 ATF5Q9Y2D1 282 aaPredicted RBP9.64□□□□□ -0.87
VEGFA-214ENST00000493786 CACNA1FO60840 1977 aa9.64□□□□□ -0.87
VEGFA-214ENST00000493786 C4AP0C0L4 1744 aa9.64□□□□□ -0.87
VEGFA-214ENST00000493786 ATP10DQ9P241 1426 aa9.64□□□□□ -0.87
VEGFA-214ENST00000493786 ADCY9O60503 1353 aa9.63□□□□□ -0.87
VEGFA-214ENST00000493786 GPTP24298 496 aa9.63□□□□□ -0.87
VEGFA-214ENST00000493786 GTF2E1P29083 439 aaPredicted RBP9.63□□□□□ -0.87
VEGFA-214ENST00000493786 NFIXQ14938 502 aa9.63□□□□□ -0.87
VEGFA-214ENST00000493786 ATF7IPQ6VMQ6 1270 aa9.63□□□□□ -0.87
VEGFA-214ENST00000493786 PPP1R42Q7Z4L9 355 aa9.63□□□□□ -0.87
VEGFA-214ENST00000493786 NBPF5PQ86XG9 351 aaPredicted RBP9.63□□□□□ -0.87
VEGFA-214ENST00000493786 NYXQ9GZU5 481 aa9.63□□□□□ -0.87
VEGFA-214ENST00000493786 BCL2L12Q9HB09 334 aa9.63□□□□□ -0.87
VEGFA-214ENST00000493786 BCORQ6W2J9 1755 aa9.63□□□□□ -0.87
VEGFA-214ENST00000493786 CASZ1Q86V15 1759 aa9.63□□□□□ -0.87
VEGFA-214ENST00000493786 FAM177BA6PVY3 158 aa9.62□□□□□ -0.87
VEGFA-214ENST00000493786 F6X3S4 739 aa9.62□□□□□ -0.87
VEGFA-214ENST00000493786 ATP5J2-PTCD1G3V325 749 aa9.62□□□□□ -0.87
VEGFA-214ENST00000493786 CCT4P50991 539 aaKnown RBP9.62□□□□□ -0.87
VEGFA-214ENST00000493786 ST5P78524 1137 aa9.62□□□□□ -0.87
VEGFA-214ENST00000493786 CNBD1Q8NA66 436 aa9.62□□□□□ -0.87
VEGFA-214ENST00000493786 LINS1Q8NG48 757 aa9.62□□□□□ -0.87
VEGFA-214ENST00000493786 UTP14AQ9BVJ6 771 aaKnown RBP9.62□□□□□ -0.87
VEGFA-214ENST00000493786 SRCIN1Q9C0H9 1055 aa9.62□□□□□ -0.87
VEGFA-214ENST00000493786 CWC25Q9NXE8 425 aaPredicted RBP9.62□□□□□ -0.87
VEGFA-214ENST00000493786 PPP1R1BQ9UD71 204 aaPredicted RBP9.62□□□□□ -0.87
VEGFA-214ENST00000493786 PXDNLA1KZ92 1463 aa9.61□□□□□ -0.87
VEGFA-214ENST00000493786 POLRMTO00411 1230 aaKnown RBP9.61□□□□□ -0.87
VEGFA-214ENST00000493786 ALDH1L1O75891 902 aa9.61□□□□□ -0.87
VEGFA-214ENST00000493786 SERPINB2P05120 415 aa9.61□□□□□ -0.87
VEGFA-214ENST00000493786 TRIM27P14373 513 aa9.61□□□□□ -0.87
VEGFA-214ENST00000493786 HSP90B1P14625 803 aaKnown RBP9.61□□□□□ -0.87
VEGFA-214ENST00000493786 TM4SF1P30408 202 aa9.61□□□□□ -0.87
VEGFA-214ENST00000493786 TPTE2Q6XPS3 522 aa9.61□□□□□ -0.87
VEGFA-214ENST00000493786 DZIP1LQ8IYY4 767 aaKnown RBP9.61□□□□□ -0.87
VEGFA-214ENST00000493786 ZNF34Q8IZ26 560 aa9.61□□□□□ -0.87
VEGFA-214ENST00000493786 CCDC191Q8NCU4 936 aa9.61□□□□□ -0.87
VEGFA-214ENST00000493786 CLUAP1Q96AJ1 413 aa9.61□□□□□ -0.87
VEGFA-214ENST00000493786 TRMT112Q9UI30 125 aaKnown RBP9.61□□□□□ -0.87
VEGFA-214ENST00000493786 RNF123Q5XPI4 1314 aa9.6□□□□□ -0.87
VEGFA-214ENST00000493786 UBN2Q6ZU65 1347 aa9.6□□□□□ -0.87
VEGFA-214ENST00000493786 NEURL1BA8MQ27 555 aa9.6□□□□□ -0.87
VEGFA-214ENST00000493786 DDR1Q08345 913 aa9.6□□□□□ -0.87
VEGFA-214ENST00000493786 TRIM28Q13263 835 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms