RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 ST5P78524 1137 aa16.54■□□□□ 0.24
SAMM50-205ENST00000493621 RSPH6AQ9H0K4 717 aa16.54■□□□□ 0.24
SAMM50-205ENST00000493621 TAOK3Q9H2K8 898 aa16.54■□□□□ 0.24
SAMM50-205ENST00000493621 STYK1Q6J9G0 422 aa16.53■□□□□ 0.24
SAMM50-205ENST00000493621 CNKSR1Q969H4 720 aa16.53■□□□□ 0.24
SAMM50-205ENST00000493621 CFAP53Q96M91 514 aa16.53■□□□□ 0.24
SAMM50-205ENST00000493621 USP16Q9Y5T5 823 aa16.53■□□□□ 0.24
SAMM50-205ENST00000493621 LTBP3Q9NS15 1303 aa16.52■□□□□ 0.24
SAMM50-205ENST00000493621 PRAMEF22A3QJZ6 481 aa16.52■□□□□ 0.24
SAMM50-205ENST00000493621 SRGNP10124 158 aa16.52■□□□□ 0.24
SAMM50-205ENST00000493621 PRPF40BQ6NWY9 871 aaKnown RBP16.52■□□□□ 0.24
SAMM50-205ENST00000493621 MASTLQ96GX5 879 aa16.51■□□□□ 0.23
SAMM50-205ENST00000493621 DDNO94850 711 aaPredicted RBP16.5■□□□□ 0.23
SAMM50-205ENST00000493621 HSPA1AP0DMV8 641 aaKnown RBP16.5■□□□□ 0.23
SAMM50-205ENST00000493621 HSPA1BP0DMV9 641 aaKnown RBP16.5■□□□□ 0.23
SAMM50-205ENST00000493621 MCM10Q7L590 875 aa16.5■□□□□ 0.23
SAMM50-205ENST00000493621 NBPF5PQ86XG9 351 aaPredicted RBP16.5■□□□□ 0.23
SAMM50-205ENST00000493621 CAPN15O75808 1086 aa16.49■□□□□ 0.23
SAMM50-205ENST00000493621 SOGA3Q5TF21 947 aa16.49■□□□□ 0.23
SAMM50-205ENST00000493621 TNS4Q8IZW8 715 aa16.49■□□□□ 0.23
SAMM50-205ENST00000493621 RTF1Q92541 710 aaKnown RBP16.49■□□□□ 0.23
SAMM50-205ENST00000493621 NUDCQ9Y266 331 aa16.49■□□□□ 0.23
SAMM50-205ENST00000493621 SNRPA1P09661 255 aaKnown RBP16.48■□□□□ 0.23
SAMM50-205ENST00000493621 POTEIP0CG38 1075 aa16.48■□□□□ 0.23
SAMM50-205ENST00000493621 POTEJP0CG39 1038 aa16.48■□□□□ 0.23
SAMM50-205ENST00000493621 U2AF1L5P0DN76 240 aaPredicted RBP16.48■□□□□ 0.23
SAMM50-205ENST00000493621 U2AF1Q01081 240 aaKnown RBP eCLIP16.48■□□□□ 0.23
SAMM50-205ENST00000493621 CHADLQ6NUI6 762 aa16.48■□□□□ 0.23
SAMM50-205ENST00000493621 CLEC4GQ6UXB4 293 aa16.48■□□□□ 0.23
SAMM50-205ENST00000493621 ZNF652Q9Y2D9 606 aa16.48■□□□□ 0.23
SAMM50-205ENST00000493621 SCN4AP35499 1836 aa16.47■□□□□ 0.23
SAMM50-205ENST00000493621 DCTN1Q14203 1278 aa16.47■□□□□ 0.23
SAMM50-205ENST00000493621 NPR1P16066 1061 aa16.46■□□□□ 0.23
SAMM50-205ENST00000493621 CCDC93Q567U6 631 aa16.46■□□□□ 0.23
SAMM50-205ENST00000493621 C7orf43Q8WVR3 580 aa16.46■□□□□ 0.23
SAMM50-205ENST00000493621 NIP7Q9Y221 180 aaKnown RBP eCLIP16.46■□□□□ 0.23
SAMM50-205ENST00000493621 LAMB4A4D0S4 1761 aa16.46■□□□□ 0.22
SAMM50-205ENST00000493621 FAM177BA6PVY3 158 aa16.45■□□□□ 0.22
SAMM50-205ENST00000493621 NBPF26B4DH59 902 aa16.45■□□□□ 0.22
SAMM50-205ENST00000493621 PPP2R1AP30153 589 aa16.45■□□□□ 0.22
SAMM50-205ENST00000493621 NBPF10Q6P3W6 841 aaKnown RBP16.45■□□□□ 0.22
SAMM50-205ENST00000493621 NBPF15Q8N660 670 aa16.45■□□□□ 0.22
SAMM50-205ENST00000493621 CREBZFQ9NS37 354 aa16.45■□□□□ 0.22
SAMM50-205ENST00000493621 DLG5Q8TDM6 1919 aa16.45■□□□□ 0.22
SAMM50-205ENST00000493621 IQCA1LA6NCM1 817 aa16.44■□□□□ 0.22
SAMM50-205ENST00000493621 TPTE2Q6XPS3 522 aa16.44■□□□□ 0.22
SAMM50-205ENST00000493621 MKRN1Q9UHC7 482 aaKnown RBP16.44■□□□□ 0.22
SAMM50-205ENST00000493621 KLRG2A4D1S0 409 aaPredicted RBP16.43■□□□□ 0.22
SAMM50-205ENST00000493621 FKBP4Q02790 459 aaKnown RBP eCLIP16.43■□□□□ 0.22
SAMM50-205ENST00000493621 OLFM4Q6UX06 510 aa16.43■□□□□ 0.22
SAMM50-205ENST00000493621 ZNF277Q9NRM2 450 aaPredicted RBP16.43■□□□□ 0.22
SAMM50-205ENST00000493621 NUP98P52948 1817 aa16.42■□□□□ 0.22
SAMM50-205ENST00000493621 HTATSF1O43719 755 aaKnown RBP16.42■□□□□ 0.22
SAMM50-205ENST00000493621 TAF7Q15545 349 aaPredicted RBP16.42■□□□□ 0.22
SAMM50-205ENST00000493621 HLFQ16534 295 aa16.42■□□□□ 0.22
SAMM50-205ENST00000493621 L3MBTL3Q96JM7 780 aaPredicted RBP16.42■□□□□ 0.22
SAMM50-205ENST00000493621 TAF1DQ9H5J8 278 aaPredicted RBP16.42■□□□□ 0.22
SAMM50-205ENST00000493621 MIS18AQ9NYP9 233 aa16.42■□□□□ 0.22
SAMM50-205ENST00000493621 ZNF541Q9H0D2 1346 aa16.42■□□□□ 0.22
SAMM50-205ENST00000493621 RGL2O15211 777 aa16.41■□□□□ 0.22
SAMM50-205ENST00000493621 LDHDQ86WU2 507 aa16.41■□□□□ 0.22
SAMM50-205ENST00000493621 KDM3BQ7LBC6 1761 aa16.41■□□□□ 0.22
SAMM50-205ENST00000493621 GTF2E1P29083 439 aaPredicted RBP16.4■□□□□ 0.22
SAMM50-205ENST00000493621 EAPPQ56P03 285 aaPredicted RBP16.4■□□□□ 0.22
SAMM50-205ENST00000493621 RTKN2Q8IZC4 609 aa16.4■□□□□ 0.22
SAMM50-205ENST00000493621 NGEFQ8N5V2 710 aa16.4■□□□□ 0.22
SAMM50-205ENST00000493621 PASKQ96RG2 1323 aa16.4■□□□□ 0.22
SAMM50-205ENST00000493621 ALDH1B1P30837 517 aa16.39■□□□□ 0.21
SAMM50-205ENST00000493621 CNTNAP1P78357 1384 aa16.38■□□□□ 0.21
SAMM50-205ENST00000493621 IARSP41252 1262 aaKnown RBP16.38■□□□□ 0.21
SAMM50-205ENST00000493621 SYNE4Q8N205 404 aa16.38■□□□□ 0.21
SAMM50-205ENST00000493621 HACL1Q9UJ83 578 aa16.38■□□□□ 0.21
SAMM50-205ENST00000493621 CLEC11AQ9Y240 323 aa16.38■□□□□ 0.21
SAMM50-205ENST00000493621 ADAMTSL1Q8N6G6 1762 aa16.38■□□□□ 0.21
SAMM50-205ENST00000493621 ABCC12Q96J65 1359 aa16.38■□□□□ 0.21
SAMM50-205ENST00000493621 NUTM1Q86Y26 1132 aa16.37■□□□□ 0.21
SAMM50-205ENST00000493621 TMEM88BA6NKF7 163 aa16.36■□□□□ 0.21
SAMM50-205ENST00000493621 ITGBL1O95965 494 aaPredicted RBP16.36■□□□□ 0.21
SAMM50-205ENST00000493621 NEFMP07197 916 aa16.36■□□□□ 0.21
SAMM50-205ENST00000493621 EPHX2P34913 555 aa16.36■□□□□ 0.21
SAMM50-205ENST00000493621 NYXQ9GZU5 481 aa16.36■□□□□ 0.21
SAMM50-205ENST00000493621 RRP7AQ9Y3A4 280 aaKnown RBP16.36■□□□□ 0.21
SAMM50-205ENST00000493621 RNF123Q5XPI4 1314 aa16.36■□□□□ 0.21
SAMM50-205ENST00000493621 FZD9O00144 591 aa16.35■□□□□ 0.21
SAMM50-205ENST00000493621 FOXN1O15353 648 aa16.35■□□□□ 0.21
SAMM50-205ENST00000493621 KIF6Q6ZMV9 814 aa16.35■□□□□ 0.21
SAMM50-205ENST00000493621 PNISRQ8TF01 805 aaKnown RBP16.35■□□□□ 0.21
SAMM50-205ENST00000493621 MAP3K15Q6ZN16 1313 aa16.35■□□□□ 0.21
SAMM50-205ENST00000493621 ERVV-1B6SEH8 477 aa16.34■□□□□ 0.21
SAMM50-205ENST00000493621 MYL6BP14649 208 aa16.34■□□□□ 0.21
SAMM50-205ENST00000493621 VEGFBP49765 207 aa16.34■□□□□ 0.21
SAMM50-205ENST00000493621 CRY2Q49AN0 593 aa16.34■□□□□ 0.21
SAMM50-205ENST00000493621 TTLL7Q6ZT98 887 aa16.34■□□□□ 0.21
SAMM50-205ENST00000493621 PSMD1Q99460 953 aa16.34■□□□□ 0.21
SAMM50-205ENST00000493621 SNED1Q8TER0 1413 aa16.34■□□□□ 0.21
SAMM50-205ENST00000493621 GPTP24298 496 aa16.33■□□□□ 0.2
SAMM50-205ENST00000493621 EIF4A1P60842 406 aaKnown RBP16.33■□□□□ 0.2
SAMM50-205ENST00000493621 MAP1SQ66K74 1059 aaPredicted RBP16.33■□□□□ 0.2
SAMM50-205ENST00000493621 PNMA8AQ86V59 439 aaPredicted RBP16.33■□□□□ 0.2
SAMM50-205ENST00000493621 GPC2Q8N158 579 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms