RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 COL8A1P27658 744 aa7.13□□□□□ -1.27
PTCD3-218ENST00000493430 PCBP4P57723 403 aaKnown RBP7.13□□□□□ -1.27
PTCD3-218ENST00000493430 TMEM132AQ24JP5 1023 aa7.13□□□□□ -1.27
PTCD3-218ENST00000493430 ZNF468Q5VIY5 522 aaPredicted RBP7.13□□□□□ -1.27
PTCD3-218ENST00000493430 KRTAP4-6Q9BYQ5 205 aa7.13□□□□□ -1.27
PTCD3-218ENST00000493430 STRN4Q9NRL3 753 aa7.13□□□□□ -1.27
PTCD3-218ENST00000493430 RBM19Q9Y4C8 960 aaKnown RBP7.13□□□□□ -1.27
PTCD3-218ENST00000493430 KRBA1A5PL33 1030 aa7.12□□□□□ -1.27
PTCD3-218ENST00000493430 DGKGP49619 791 aa7.12□□□□□ -1.27
PTCD3-218ENST00000493430 PSMA6P60900 246 aaKnown RBP7.12□□□□□ -1.27
PTCD3-218ENST00000493430 CHSY3Q70JA7 882 aa7.12□□□□□ -1.27
PTCD3-218ENST00000493430 FCHSD1Q86WN1 690 aa7.12□□□□□ -1.27
PTCD3-218ENST00000493430 C7orf43Q8WVR3 580 aa7.12□□□□□ -1.27
PTCD3-218ENST00000493430 CLUAP1Q96AJ1 413 aa7.12□□□□□ -1.27
PTCD3-218ENST00000493430 PROCP04070 461 aa7.11□□□□□ -1.27
PTCD3-218ENST00000493430 GRIN2CQ14957 1233 aa7.11□□□□□ -1.27
PTCD3-218ENST00000493430 C1orf53Q5VUE5 145 aa7.11□□□□□ -1.27
PTCD3-218ENST00000493430 PROSER2Q86WR7 435 aaPredicted RBP7.11□□□□□ -1.27
PTCD3-218ENST00000493430 RHPN1Q8TCX5 695 aa7.11□□□□□ -1.27
PTCD3-218ENST00000493430 TSPAN10Q9H1Z9 355 aaPredicted RBP7.11□□□□□ -1.27
PTCD3-218ENST00000493430 SUV39H2Q9H5I1 410 aa7.11□□□□□ -1.27
PTCD3-218ENST00000493430 NOP53Q9NZM5 478 aaKnown RBP7.11□□□□□ -1.27
PTCD3-218ENST00000493430 HIRAP54198 1017 aaPredicted RBP7.1□□□□□ -1.27
PTCD3-218ENST00000493430 SH3PXD2AQ5TCZ1 1133 aa7.1□□□□□ -1.27
PTCD3-218ENST00000493430 SIX5Q8N196 739 aa7.1□□□□□ -1.27
PTCD3-218ENST00000493430 FNBP4Q8N3X1 1017 aaPredicted RBP7.1□□□□□ -1.27
PTCD3-218ENST00000493430 GLMNQ92990 594 aa7.1□□□□□ -1.27
PTCD3-218ENST00000493430 ZNF594Q96JF6 807 aaPredicted RBP7.1□□□□□ -1.27
PTCD3-218ENST00000493430 ANKIB1Q9P2G1 1089 aa7.1□□□□□ -1.27
PTCD3-218ENST00000493430 TFIP11Q9UBB9 837 aaKnown RBP7.1□□□□□ -1.27
PTCD3-218ENST00000493430 HCN4Q9Y3Q4 1203 aa7.1□□□□□ -1.27
PTCD3-218ENST00000493430 RASA1P20936 1047 aa7.09□□□□□ -1.27
PTCD3-218ENST00000493430 ALAS2P22557 587 aa7.09□□□□□ -1.27
PTCD3-218ENST00000493430 SYT9Q86SS6 491 aa7.09□□□□□ -1.27
PTCD3-218ENST00000493430 TSEN2Q8NCE0 465 aaKnown RBP7.09□□□□□ -1.27
PTCD3-218ENST00000493430 ELOA3CA0A087WX78 387 aaPredicted RBP7.08□□□□□ -1.28
PTCD3-218ENST00000493430 ELOA3DA6NLF2 546 aaPredicted RBP7.08□□□□□ -1.28
PTCD3-218ENST00000493430 SFI1A8K8P3 1242 aa7.08□□□□□ -1.28
PTCD3-218ENST00000493430 PPP1R12BO60237 982 aaPredicted RBP7.08□□□□□ -1.28
PTCD3-218ENST00000493430 ELOA3BQ3SY89 546 aa7.08□□□□□ -1.28
PTCD3-218ENST00000493430 POTEAQ6S8J7 498 aa7.08□□□□□ -1.28
PTCD3-218ENST00000493430 ELOA3Q8NG57 546 aa7.08□□□□□ -1.28
PTCD3-218ENST00000493430 PHACTR1Q9C0D0 580 aa7.08□□□□□ -1.28
PTCD3-218ENST00000493430 SIN3BO75182 1162 aa7.07□□□□□ -1.28
PTCD3-218ENST00000493430 DKK1O94907 266 aa7.07□□□□□ -1.28
PTCD3-218ENST00000493430 SEC13P55735 322 aa7.07□□□□□ -1.28
PTCD3-218ENST00000493430 SFSWAPQ12872 951 aaKnown RBP7.07□□□□□ -1.28
PTCD3-218ENST00000493430 NEUROD1Q13562 356 aa7.07□□□□□ -1.28
PTCD3-218ENST00000493430 CEP63Q96MT8 703 aa7.07□□□□□ -1.28
PTCD3-218ENST00000493430 MAFBQ9Y5Q3 323 aaPredicted RBP7.07□□□□□ -1.28
PTCD3-218ENST00000493430 ADAM23O75077 832 aa7.06□□□□□ -1.28
PTCD3-218ENST00000493430 LARP1Q6PKG0 1096 aaKnown RBP7.06□□□□□ -1.28
PTCD3-218ENST00000493430 STAG2Q8N3U4 1231 aa7.06□□□□□ -1.28
PTCD3-218ENST00000493430 GAS2L2Q8NHY3 880 aa7.06□□□□□ -1.28
PTCD3-218ENST00000493430 CALR3Q96L12 384 aaKnown RBP7.06□□□□□ -1.28
PTCD3-218ENST00000493430 ATAD2Q6PL18 1390 aa7.06□□□□□ -1.28
PTCD3-218ENST00000493430 ADARB2-AS1A8MUL3 147 aa7.05□□□□□ -1.28
PTCD3-218ENST00000493430 C21orf2O43822 256 aa7.05□□□□□ -1.28
PTCD3-218ENST00000493430 BAG6P46379 1132 aa7.05□□□□□ -1.28
PTCD3-218ENST00000493430 SPEM2Q0P670 501 aa7.05□□□□□ -1.28
PTCD3-218ENST00000493430 SCG3Q8WXD2 468 aaKnown RBP7.05□□□□□ -1.28
PTCD3-218ENST00000493430 HSH2DQ96JZ2 352 aa7.05□□□□□ -1.28
PTCD3-218ENST00000493430 SUSD3Q96L08 255 aa7.05□□□□□ -1.28
PTCD3-218ENST00000493430 SLC30A3Q99726 388 aa7.05□□□□□ -1.28
PTCD3-218ENST00000493430 PLVAPQ9BX97 442 aa7.05□□□□□ -1.28
PTCD3-218ENST00000493430 BRD7Q9NPI1 651 aa7.05□□□□□ -1.28
PTCD3-218ENST00000493430 A6NJR5 290 aa7.04□□□□□ -1.28
PTCD3-218ENST00000493430 C1QTNF9BB2RNN3 333 aa7.04□□□□□ -1.28
PTCD3-218ENST00000493430 KCNQ4P56696 695 aa7.04□□□□□ -1.28
PTCD3-218ENST00000493430 HIF1AQ16665 826 aa7.04□□□□□ -1.28
PTCD3-218ENST00000493430 ALDH16A1Q8IZ83 802 aa7.04□□□□□ -1.28
PTCD3-218ENST00000493430 ZNF280CQ8ND82 737 aa7.04□□□□□ -1.28
PTCD3-218ENST00000493430 CHMP7Q8WUX9 453 aaPredicted RBP7.04□□□□□ -1.28
PTCD3-218ENST00000493430 MDFIQ99750 246 aa7.04□□□□□ -1.28
PTCD3-218ENST00000493430 HINFPQ9BQA5 517 aa7.04□□□□□ -1.28
PTCD3-218ENST00000493430 C2orf49Q9BVC5 232 aaPredicted RBP7.04□□□□□ -1.28
PTCD3-218ENST00000493430 PPP1R12CQ9BZL4 782 aa7.04□□□□□ -1.28
PTCD3-218ENST00000493430 KCNH4Q9UQ05 1017 aa7.04□□□□□ -1.28
PTCD3-218ENST00000493430 CD163Q86VB7 1156 aa7.03□□□□□ -1.28
PTCD3-218ENST00000493430 TNFRSF25Q93038 417 aa7.03□□□□□ -1.28
PTCD3-218ENST00000493430 TRIM11Q96F44 468 aa7.03□□□□□ -1.28
PTCD3-218ENST00000493430 SPDYE3A6NKU9 549 aa7.02□□□□□ -1.29
PTCD3-218ENST00000493430 K7ELQ4 463 aaPredicted RBP7.02□□□□□ -1.29
PTCD3-218ENST00000493430 TYRO3Q06418 890 aa7.02□□□□□ -1.29
PTCD3-218ENST00000493430 M0R082 166 aa7.01□□□□□ -1.29
PTCD3-218ENST00000493430 SPATA31C1P0DKV0 1188 aa7.01□□□□□ -1.29
PTCD3-218ENST00000493430 PTK7Q13308 1070 aa7.01□□□□□ -1.29
PTCD3-218ENST00000493430 CRTC2Q53ET0 693 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-218ENST00000493430 KANK4Q5T7N3 995 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-218ENST00000493430 BTLAQ7Z6A9 289 aa7.01□□□□□ -1.29
PTCD3-218ENST00000493430 RAB44Q7Z6P3 723 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-218ENST00000493430 ZNF417Q8TAU3 575 aa7.01□□□□□ -1.29
PTCD3-218ENST00000493430 NGLY1Q96IV0 654 aa7.01□□□□□ -1.29
PTCD3-218ENST00000493430 ZNF587Q96SQ5 575 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-218ENST00000493430 VRTNQ9H8Y1 702 aa7.01□□□□□ -1.29
PTCD3-218ENST00000493430 FURINP09958 794 aa7□□□□□ -1.29
PTCD3-218ENST00000493430 LMOD1P29536 600 aaPredicted RBP7□□□□□ -1.29
PTCD3-218ENST00000493430 ADH7P40394 386 aa7□□□□□ -1.29
PTCD3-218ENST00000493430 CHRNA4P43681 627 aa7□□□□□ -1.29
PTCD3-218ENST00000493430 DPYDQ12882 1025 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms