RNA–Protein interactions for RNA: ENST00000493389.1

PMM1-209, Transcript of phosphomannomutase 1, humanhuman

TSL 3

Gene PMM1, Length 866 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM1-209ENST00000493389 ZNF652Q9Y2D9 606 aa23.21■■□□□ 1.31
PMM1-209ENST00000493389 MAP3K15Q6ZN16 1313 aa23.2■■□□□ 1.3
PMM1-209ENST00000493389 HDGFL1Q5TGJ6 251 aa23.2■■□□□ 1.3
PMM1-209ENST00000493389 TSR2Q969E8 191 aaKnown RBP23.2■■□□□ 1.3
PMM1-209ENST00000493389 ZBTB3Q9H5J0 574 aa23.2■■□□□ 1.3
PMM1-209ENST00000493389 KIAA1551Q9HCM1 1747 aa23.19■■□□□ 1.3
PMM1-209ENST00000493389 NCBP3Q53F19 620 aaKnown RBP23.19■■□□□ 1.3
PMM1-209ENST00000493389 PRR5LQ6MZQ0 368 aa23.19■■□□□ 1.3
PMM1-209ENST00000493389 KIF6Q6ZMV9 814 aa23.19■■□□□ 1.3
PMM1-209ENST00000493389 CHPF2Q9P2E5 772 aa23.19■■□□□ 1.3
PMM1-209ENST00000493389 KIF13BQ9NQT8 1826 aa23.19■■□□□ 1.3
PMM1-209ENST00000493389 BCORQ6W2J9 1755 aa23.19■■□□□ 1.3
PMM1-209ENST00000493389 ELL2O00472 640 aaPredicted RBP23.18■■□□□ 1.3
PMM1-209ENST00000493389 RGL2O15211 777 aa23.18■■□□□ 1.3
PMM1-209ENST00000493389 HOXB7P09629 217 aa23.18■■□□□ 1.3
PMM1-209ENST00000493389 C8orf58Q8NAV2 365 aa23.18■■□□□ 1.3
PMM1-209ENST00000493389 NIP7Q9Y221 180 aaKnown RBP eCLIP23.18■■□□□ 1.3
PMM1-209ENST00000493389 ERVV-1B6SEH8 477 aa23.17■■□□□ 1.3
PMM1-209ENST00000493389 GRIN3BO60391 1043 aa23.17■■□□□ 1.3
PMM1-209ENST00000493389 YY1P25490 414 aa23.17■■□□□ 1.3
PMM1-209ENST00000493389 NRXN2Q9P2S2 1712 aa23.16■■□□□ 1.3
PMM1-209ENST00000493389 CNBD1Q8NA66 436 aa23.16■■□□□ 1.3
PMM1-209ENST00000493389 XAGE3Q8WTP9 111 aa23.16■■□□□ 1.3
PMM1-209ENST00000493389 DDX21Q9NR30 783 aaKnown RBP eCLIP23.16■■□□□ 1.3
PMM1-209ENST00000493389 BCS1LQ9Y276 419 aa23.16■■□□□ 1.3
PMM1-209ENST00000493389 FAM177BA6PVY3 158 aa23.15■■□□□ 1.3
PMM1-209ENST00000493389 COPS6Q7L5N1 327 aa23.15■■□□□ 1.3
PMM1-209ENST00000493389 NBPF5PQ86XG9 351 aaPredicted RBP23.15■■□□□ 1.3
PMM1-209ENST00000493389 IL16Q14005 1332 aa23.14■■□□□ 1.3
PMM1-209ENST00000493389 AIMP1Q12904 312 aaKnown RBP23.14■■□□□ 1.29
PMM1-209ENST00000493389 TSPYL6Q8N831 410 aa23.14■■□□□ 1.29
PMM1-209ENST00000493389 N4BP2Q86UW6 1770 aaPredicted RBP23.14■■□□□ 1.29
PMM1-209ENST00000493389 AFDNP55196 1824 aaKnown RBP23.13■■□□□ 1.29
PMM1-209ENST00000493389 NPHP1O15259 732 aa23.13■■□□□ 1.29
PMM1-209ENST00000493389 C2CD5Q86YS7 1000 aa23.13■■□□□ 1.29
PMM1-209ENST00000493389 PIM2Q9P1W9 311 aa23.13■■□□□ 1.29
PMM1-209ENST00000493389 CCER2I3L3R5 266 aa23.12■■□□□ 1.29
PMM1-209ENST00000493389 GPTP24298 496 aa23.12■■□□□ 1.29
PMM1-209ENST00000493389 BRIP1Q9BX63 1249 aa23.12■■□□□ 1.29
PMM1-209ENST00000493389 ATP10DQ9P241 1426 aa23.12■■□□□ 1.29
PMM1-209ENST00000493389 DBF4Q9UBU7 674 aaPredicted RBP23.12■■□□□ 1.29
PMM1-209ENST00000493389 UBN2Q6ZU65 1347 aa23.11■■□□□ 1.29
PMM1-209ENST00000493389 ST5P78524 1137 aa23.11■■□□□ 1.29
PMM1-209ENST00000493389 DALRD3Q5D0E6 543 aaKnown RBP23.11■■□□□ 1.29
PMM1-209ENST00000493389 DIEXFQ68CQ4 756 aaKnown RBP23.11■■□□□ 1.29
PMM1-209ENST00000493389 GIGYF2Q6Y7W6 1299 aaKnown RBP23.11■■□□□ 1.29
PMM1-209ENST00000493389 WDR63Q8IWG1 891 aa23.11■■□□□ 1.29
PMM1-209ENST00000493389 SPINK5Q9NQ38 1064 aaPredicted RBP23.11■■□□□ 1.29
PMM1-209ENST00000493389 FANCIQ9NVI1 1328 aa23.1■■□□□ 1.29
PMM1-209ENST00000493389 ZNF34Q8IZ26 560 aa23.1■■□□□ 1.29
PMM1-209ENST00000493389 H0YIN7 160 aa23.09■■□□□ 1.29
PMM1-209ENST00000493389 PDE6BP35913 854 aa23.09■■□□□ 1.29
PMM1-209ENST00000493389 TPTE2Q6XPS3 522 aa23.09■■□□□ 1.29
PMM1-209ENST00000493389 SUSD4Q5VX71 490 aa23.07■■□□□ 1.28
PMM1-209ENST00000493389 NUTM1Q86Y26 1132 aa23.07■■□□□ 1.28
PMM1-209ENST00000493389 HYPKQ9NX55 129 aa23.07■■□□□ 1.28
PMM1-209ENST00000493389 ABCC12Q96J65 1359 aa23.06■■□□□ 1.28
PMM1-209ENST00000493389 MIER1Q8N108 512 aa23.06■■□□□ 1.28
PMM1-209ENST00000493389 PHAXQ9H814 394 aaKnown RBP23.06■■□□□ 1.28
PMM1-209ENST00000493389 TCERG1O14776 1098 aaKnown RBP23.05■■□□□ 1.28
PMM1-209ENST00000493389 TWISTNBQ3B726 338 aaPredicted RBP23.05■■□□□ 1.28
PMM1-209ENST00000493389 ERFEQ4G0M1 354 aa23.05■■□□□ 1.28
PMM1-209ENST00000493389 ARHGAP27Q6ZUM4 889 aa23.05■■□□□ 1.28
PMM1-209ENST00000493389 ZNF622Q969S3 477 aaKnown RBP eCLIP23.05■■□□□ 1.28
PMM1-209ENST00000493389 ZNF521Q96K83 1311 aa23.05■■□□□ 1.28
PMM1-209ENST00000493389 NTSR2O95665 410 aa23.04■■□□□ 1.28
PMM1-209ENST00000493389 GTF2E1P29083 439 aaPredicted RBP23.04■■□□□ 1.28
PMM1-209ENST00000493389 CCDC30Q5VVM6 783 aa23.04■■□□□ 1.28
PMM1-209ENST00000493389 ANKRD13DQ6ZTN6 518 aa23.04■■□□□ 1.28
PMM1-209ENST00000493389 TTLL6Q8N841 843 aa23.04■■□□□ 1.28
PMM1-209ENST00000493389 NYXQ9GZU5 481 aa23.04■■□□□ 1.28
PMM1-209ENST00000493389 ANKRD31Q8N7Z5 1873 aa23.04■■□□□ 1.28
PMM1-209ENST00000493389 SRGNP10124 158 aa23.03■■□□□ 1.28
PMM1-209ENST00000493389 EXOSC9Q06265 439 aaKnown RBP23.03■■□□□ 1.28
PMM1-209ENST00000493389 TCIRG1Q13488 830 aa23.03■■□□□ 1.28
PMM1-209ENST00000493389 PLBD2Q8NHP8 589 aa23.03■■□□□ 1.28
PMM1-209ENST00000493389 PDZRN3Q9UPQ7 1066 aa23.03■■□□□ 1.28
PMM1-209ENST00000493389 IBTKQ9P2D0 1353 aaPredicted RBP23.02■■□□□ 1.28
PMM1-209ENST00000493389 PARP10Q53GL7 1025 aa23.02■■□□□ 1.28
PMM1-209ENST00000493389 HSP90AB3PQ58FF7 597 aa23.02■■□□□ 1.28
PMM1-209ENST00000493389 ZNF428Q96B54 188 aa23.02■■□□□ 1.28
PMM1-209ENST00000493389 BRCA1P38398 1863 aaKnown RBP23.02■■□□□ 1.28
PMM1-209ENST00000493389 KLRG2A4D1S0 409 aaPredicted RBP23.01■■□□□ 1.27
PMM1-209ENST00000493389 GOLGA2Q08379 1002 aa23.01■■□□□ 1.27
PMM1-209ENST00000493389 NLRP10Q86W26 655 aa23.01■■□□□ 1.27
PMM1-209ENST00000493389 COL11A2P13942 1736 aaPredicted RBP23■■□□□ 1.27
PMM1-209ENST00000493389 STYK1Q6J9G0 422 aa23■■□□□ 1.27
PMM1-209ENST00000493389 ZNF784Q8NCA9 323 aaPredicted RBP23■■□□□ 1.27
PMM1-209ENST00000493389 UTP14AQ9BVJ6 771 aaKnown RBP23■■□□□ 1.27
PMM1-209ENST00000493389 MYH16Q9H6N6 1097 aa23■■□□□ 1.27
PMM1-209ENST00000493389 NUP98P52948 1817 aa23■■□□□ 1.27
PMM1-209ENST00000493389 PPP1R42Q7Z4L9 355 aa22.99■■□□□ 1.27
PMM1-209ENST00000493389 MASTLQ96GX5 879 aa22.99■■□□□ 1.27
PMM1-209ENST00000493389 ZNF219Q9P2Y4 722 aaPredicted RBP22.99■■□□□ 1.27
PMM1-209ENST00000493389 ATP5J2-PTCD1G3V325 749 aa22.98■■□□□ 1.27
PMM1-209ENST00000493389 VAMP4O75379 141 aa22.98■■□□□ 1.27
PMM1-209ENST00000493389 C3orf67Q6ZVT6 689 aa22.98■■□□□ 1.27
PMM1-209ENST00000493389 CHMP4AQ9BY43 222 aa22.98■■□□□ 1.27
PMM1-209ENST00000493389 G2E3Q7L622 706 aa22.97■■□□□ 1.27
PMM1-209ENST00000493389 RIC3Q7Z5B4 369 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms