RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 C16orf71Q8IYS4 520 aaPredicted RBP17.73■□□□□ 0.43
IRF1-210ENST00000493208 MASTLQ96GX5 879 aa17.73■□□□□ 0.43
IRF1-210ENST00000493208 THUMPD2Q9BTF0 503 aaKnown RBP17.73■□□□□ 0.43
IRF1-210ENST00000493208 RRP7AQ9Y3A4 280 aaKnown RBP17.73■□□□□ 0.43
IRF1-210ENST00000493208 KIAA1551Q9HCM1 1747 aa17.72■□□□□ 0.43
IRF1-210ENST00000493208 LAMB4A4D0S4 1761 aa17.72■□□□□ 0.43
IRF1-210ENST00000493208 STYK1Q6J9G0 422 aa17.72■□□□□ 0.43
IRF1-210ENST00000493208 CCDC146Q8IYE0 955 aa17.72■□□□□ 0.43
IRF1-210ENST00000493208 RNF181Q9P0P0 153 aa17.72■□□□□ 0.43
IRF1-210ENST00000493208 ARFGEF1Q9Y6D6 1849 aa17.72■□□□□ 0.43
IRF1-210ENST00000493208 SENP3-EIF4A1A0A087X0R7 540 aa17.71■□□□□ 0.43
IRF1-210ENST00000493208 LMNB1P20700 586 aa17.71■□□□□ 0.43
IRF1-210ENST00000493208 PIP4K2AP48426 406 aaPredicted RBP17.71■□□□□ 0.43
IRF1-210ENST00000493208 ADAMTS8Q9UP79 889 aa17.71■□□□□ 0.43
IRF1-210ENST00000493208 MAP3K15Q6ZN16 1313 aa17.71■□□□□ 0.42
IRF1-210ENST00000493208 DLG5Q8TDM6 1919 aa17.7■□□□□ 0.42
IRF1-210ENST00000493208 NBPF26B4DH59 902 aa17.7■□□□□ 0.42
IRF1-210ENST00000493208 MYL6BP14649 208 aa17.7■□□□□ 0.42
IRF1-210ENST00000493208 HSP90AB3PQ58FF7 597 aa17.7■□□□□ 0.42
IRF1-210ENST00000493208 NBPF10Q6P3W6 841 aaKnown RBP17.7■□□□□ 0.42
IRF1-210ENST00000493208 NGEFQ8N5V2 710 aa17.7■□□□□ 0.42
IRF1-210ENST00000493208 NBPF15Q8N660 670 aa17.7■□□□□ 0.42
IRF1-210ENST00000493208 LAS1LQ9Y4W2 734 aaKnown RBP17.7■□□□□ 0.42
IRF1-210ENST00000493208 KDM3BQ7LBC6 1761 aa17.7■□□□□ 0.42
IRF1-210ENST00000493208 BRCA1P38398 1863 aaKnown RBP17.69■□□□□ 0.42
IRF1-210ENST00000493208 ANP32CO43423 234 aa17.69■□□□□ 0.42
IRF1-210ENST00000493208 HOXB7P09629 217 aa17.69■□□□□ 0.42
IRF1-210ENST00000493208 NPR1P16066 1061 aa17.69■□□□□ 0.42
IRF1-210ENST00000493208 EIF2S2P20042 333 aaKnown RBP17.69■□□□□ 0.42
IRF1-210ENST00000493208 ALDH1B1P30837 517 aa17.69■□□□□ 0.42
IRF1-210ENST00000493208 PPP1R42Q7Z4L9 355 aa17.69■□□□□ 0.42
IRF1-210ENST00000493208 TMX4Q9H1E5 349 aaPredicted RBP17.69■□□□□ 0.42
IRF1-210ENST00000493208 AFDNP55196 1824 aaKnown RBP17.69■□□□□ 0.42
IRF1-210ENST00000493208 BCORQ6W2J9 1755 aa17.68■□□□□ 0.42
IRF1-210ENST00000493208 PARP10Q53GL7 1025 aa17.68■□□□□ 0.42
IRF1-210ENST00000493208 SRGNP10124 158 aa17.67■□□□□ 0.42
IRF1-210ENST00000493208 DPY19L2Q6NUT2 758 aa17.67■□□□□ 0.42
IRF1-210ENST00000493208 IBTKQ9P2D0 1353 aaPredicted RBP17.66■□□□□ 0.42
IRF1-210ENST00000493208 ZNF316A6NFI3 1004 aaPredicted RBP17.66■□□□□ 0.42
IRF1-210ENST00000493208 CHL1O00533 1208 aa17.66■□□□□ 0.42
IRF1-210ENST00000493208 CFAP44Q96MT7 982 aa17.66■□□□□ 0.42
IRF1-210ENST00000493208 RNF123Q5XPI4 1314 aa17.66■□□□□ 0.42
IRF1-210ENST00000493208 TOMM70O94826 608 aa17.65■□□□□ 0.42
IRF1-210ENST00000493208 GNAI1P63096 354 aa17.65■□□□□ 0.42
IRF1-210ENST00000493208 GRIPAP1Q4V328 841 aa17.65■□□□□ 0.42
IRF1-210ENST00000493208 RPGRQ92834 1020 aaKnown RBP17.65■□□□□ 0.42
IRF1-210ENST00000493208 TAOK3Q9H2K8 898 aa17.65■□□□□ 0.42
IRF1-210ENST00000493208 ZBTB3Q9H5J0 574 aa17.65■□□□□ 0.42
IRF1-210ENST00000493208 DLEC1Q9Y238 1755 aa17.65■□□□□ 0.42
IRF1-210ENST00000493208 FAM177BA6PVY3 158 aa17.64■□□□□ 0.41
IRF1-210ENST00000493208 C21orf2O43822 256 aa17.64■□□□□ 0.41
IRF1-210ENST00000493208 CCDC93Q567U6 631 aa17.64■□□□□ 0.41
IRF1-210ENST00000493208 PRPF40BQ6NWY9 871 aaKnown RBP17.64■□□□□ 0.41
IRF1-210ENST00000493208 GIGYF2Q6Y7W6 1299 aaKnown RBP17.64■□□□□ 0.41
IRF1-210ENST00000493208 RTKN2Q8IZC4 609 aa17.64■□□□□ 0.41
IRF1-210ENST00000493208 HLFQ16534 295 aa17.63■□□□□ 0.41
IRF1-210ENST00000493208 HDGFL1Q5TGJ6 251 aa17.63■□□□□ 0.41
IRF1-210ENST00000493208 CC2D2BQ6DHV5 1058 aa17.63■□□□□ 0.41
IRF1-210ENST00000493208 CCDC24Q8N4L8 307 aa17.63■□□□□ 0.41
IRF1-210ENST00000493208 DDX21Q9NR30 783 aaKnown RBP eCLIP17.63■□□□□ 0.41
IRF1-210ENST00000493208 DBF4Q9UBU7 674 aaPredicted RBP17.63■□□□□ 0.41
IRF1-210ENST00000493208 LTBP3Q9NS15 1303 aa17.63■□□□□ 0.41
IRF1-210ENST00000493208 KLRG2A4D1S0 409 aaPredicted RBP17.62■□□□□ 0.41
IRF1-210ENST00000493208 IFT57Q9NWB7 429 aa17.62■□□□□ 0.41
IRF1-210ENST00000493208 TRIM35Q9UPQ4 493 aa17.62■□□□□ 0.41
IRF1-210ENST00000493208 APAF1O14727 1248 aa17.61■□□□□ 0.41
IRF1-210ENST00000493208 HSP90B1P14625 803 aaKnown RBP17.61■□□□□ 0.41
IRF1-210ENST00000493208 ERFEQ4G0M1 354 aa17.61■□□□□ 0.41
IRF1-210ENST00000493208 TTLL7Q6ZT98 887 aa17.61■□□□□ 0.41
IRF1-210ENST00000493208 RBM17Q96I25 401 aaKnown RBP17.61■□□□□ 0.41
IRF1-210ENST00000493208 UTP14AQ9BVJ6 771 aaKnown RBP17.61■□□□□ 0.41
IRF1-210ENST00000493208 HYPKQ9NX55 129 aa17.61■□□□□ 0.41
IRF1-210ENST00000493208 ZNF219Q9P2Y4 722 aaPredicted RBP17.61■□□□□ 0.41
IRF1-210ENST00000493208 HSPA6P17066 643 aa17.6■□□□□ 0.41
IRF1-210ENST00000493208 GPTP24298 496 aa17.6■□□□□ 0.41
IRF1-210ENST00000493208 RASSF7Q02833 373 aa17.6■□□□□ 0.41
IRF1-210ENST00000493208 NLRP3Q96P20 1036 aa17.6■□□□□ 0.41
IRF1-210ENST00000493208 RIC1Q4ADV7 1423 aa17.6■□□□□ 0.41
IRF1-210ENST00000493208 GLTPD2A6NH11 291 aa17.59■□□□□ 0.41
IRF1-210ENST00000493208 KIF3CO14782 793 aa17.59■□□□□ 0.41
IRF1-210ENST00000493208 FSTL1Q12841 308 aa17.59■□□□□ 0.41
IRF1-210ENST00000493208 COPS6Q7L5N1 327 aa17.59■□□□□ 0.41
IRF1-210ENST00000493208 ZNF34Q8IZ26 560 aa17.59■□□□□ 0.41
IRF1-210ENST00000493208 RBM46Q8TBY0 533 aaKnown RBP17.59■□□□□ 0.41
IRF1-210ENST00000493208 NFKBIEO00221 500 aa17.58■□□□□ 0.4
IRF1-210ENST00000493208 VEGFAP15692 232 aaPredicted RBP17.58■□□□□ 0.4
IRF1-210ENST00000493208 AIMP1Q12904 312 aaKnown RBP17.58■□□□□ 0.4
IRF1-210ENST00000493208 MRS2Q9HD23 443 aa17.58■□□□□ 0.4
IRF1-210ENST00000493208 APLP1P51693 650 aa17.57■□□□□ 0.4
IRF1-210ENST00000493208 GOLGA2Q08379 1002 aa17.57■□□□□ 0.4
IRF1-210ENST00000493208 NCBP3Q53F19 620 aaKnown RBP17.57■□□□□ 0.4
IRF1-210ENST00000493208 DUSP27Q5VZP5 1158 aa17.57■□□□□ 0.4
IRF1-210ENST00000493208 XAGE3Q8WTP9 111 aa17.57■□□□□ 0.4
IRF1-210ENST00000493208 NECTIN2Q92692 538 aa17.57■□□□□ 0.4
IRF1-210ENST00000493208 ANKRD31Q8N7Z5 1873 aa17.56■□□□□ 0.4
IRF1-210ENST00000493208 DDX58O95786 925 aaKnown RBP17.56■□□□□ 0.4
IRF1-210ENST00000493208 FKBP4Q02790 459 aaKnown RBP eCLIP17.56■□□□□ 0.4
IRF1-210ENST00000493208 PDIA6Q15084 440 aa17.56■□□□□ 0.4
IRF1-210ENST00000493208 CRY2Q49AN0 593 aa17.56■□□□□ 0.4
IRF1-210ENST00000493208 NUTM1Q86Y26 1132 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms