RNA–Protein interactions for RNA: ENST00000492991.5

C9orf78-206, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-206ENST00000492991 APLP1P51693 650 aa21.55■■□□□ 1.04
C9orf78-206ENST00000492991 EIF4A1P60842 406 aaKnown RBP21.55■■□□□ 1.04
C9orf78-206ENST00000492991 TPTE2Q6XPS3 522 aa21.55■■□□□ 1.04
C9orf78-206ENST00000492991 BCORQ6W2J9 1755 aa21.55■■□□□ 1.04
C9orf78-206ENST00000492991 ANKRD31Q8N7Z5 1873 aa21.55■■□□□ 1.04
C9orf78-206ENST00000492991 PRELPP51888 382 aa21.54■■□□□ 1.04
C9orf78-206ENST00000492991 FSTL1Q12841 308 aa21.54■■□□□ 1.04
C9orf78-206ENST00000492991 NBPF5PQ86XG9 351 aaPredicted RBP21.54■■□□□ 1.04
C9orf78-206ENST00000492991 C16orf71Q8IYS4 520 aaPredicted RBP21.54■■□□□ 1.04
C9orf78-206ENST00000492991 MASTLQ96GX5 879 aa21.54■■□□□ 1.04
C9orf78-206ENST00000492991 LTBP3Q9NS15 1303 aa21.54■■□□□ 1.04
C9orf78-206ENST00000492991 GLTPD2A6NH11 291 aa21.53■■□□□ 1.04
C9orf78-206ENST00000492991 ERVV-1B6SEH8 477 aa21.53■■□□□ 1.04
C9orf78-206ENST00000492991 SOGA3Q5TF21 947 aa21.53■■□□□ 1.04
C9orf78-206ENST00000492991 CCDC24Q8N4L8 307 aa21.53■■□□□ 1.04
C9orf78-206ENST00000492991 BABAM1Q9NWV8 329 aa21.53■■□□□ 1.04
C9orf78-206ENST00000492991 RRAGCQ9HB90 399 aa21.52■■□□□ 1.04
C9orf78-206ENST00000492991 NIP7Q9Y221 180 aaKnown RBP eCLIP21.52■■□□□ 1.04
C9orf78-206ENST00000492991 DLG5Q8TDM6 1919 aa21.51■■□□□ 1.03
C9orf78-206ENST00000492991 C21orf2O43822 256 aa21.51■■□□□ 1.03
C9orf78-206ENST00000492991 ERBB4Q15303 1308 aa21.5■■□□□ 1.03
C9orf78-206ENST00000492991 KDM3BQ7LBC6 1761 aa21.49■■□□□ 1.03
C9orf78-206ENST00000492991 VEGFAP15692 232 aaPredicted RBP21.49■■□□□ 1.03
C9orf78-206ENST00000492991 NPR1P16066 1061 aa21.49■■□□□ 1.03
C9orf78-206ENST00000492991 HLFQ16534 295 aa21.49■■□□□ 1.03
C9orf78-206ENST00000492991 PRPF40BQ6NWY9 871 aaKnown RBP21.49■■□□□ 1.03
C9orf78-206ENST00000492991 C7orf43Q8WVR3 580 aa21.49■■□□□ 1.03
C9orf78-206ENST00000492991 LMOD3Q0VAK6 560 aa21.48■■□□□ 1.03
C9orf78-206ENST00000492991 DPY19L2Q6NUT2 758 aa21.48■■□□□ 1.03
C9orf78-206ENST00000492991 THUMPD2Q9BTF0 503 aaKnown RBP21.48■■□□□ 1.03
C9orf78-206ENST00000492991 MYBBP1AQ9BQG0 1328 aaKnown RBP21.48■■□□□ 1.03
C9orf78-206ENST00000492991 TNRC6CQ9HCJ0 1690 aaKnown RBP21.47■■□□□ 1.03
C9orf78-206ENST00000492991 COL11A2P13942 1736 aaPredicted RBP21.47■■□□□ 1.03
C9orf78-206ENST00000492991 LAMB4A4D0S4 1761 aa21.47■■□□□ 1.03
C9orf78-206ENST00000492991 RIPK4P57078 832 aa21.47■■□□□ 1.03
C9orf78-206ENST00000492991 DDX10Q13206 875 aaKnown RBP21.47■■□□□ 1.03
C9orf78-206ENST00000492991 NYXQ9GZU5 481 aa21.47■■□□□ 1.03
C9orf78-206ENST00000492991 TAOK3Q9H2K8 898 aa21.47■■□□□ 1.03
C9orf78-206ENST00000492991 MAP3K15Q6ZN16 1313 aa21.47■■□□□ 1.03
C9orf78-206ENST00000492991 FER1L6Q2WGJ9 1857 aa21.46■■□□□ 1.03
C9orf78-206ENST00000492991 TMPOP42166 694 aaKnown RBP21.46■■□□□ 1.03
C9orf78-206ENST00000492991 DNAJC5GQ8N7S2 189 aa21.46■■□□□ 1.03
C9orf78-206ENST00000492991 ALDH1B1P30837 517 aa21.45■■□□□ 1.02
C9orf78-206ENST00000492991 ERFEQ4G0M1 354 aa21.45■■□□□ 1.02
C9orf78-206ENST00000492991 KIF6Q6ZMV9 814 aa21.45■■□□□ 1.02
C9orf78-206ENST00000492991 SMC1BQ8NDV3 1235 aa21.45■■□□□ 1.02
C9orf78-206ENST00000492991 TSPYL4Q9UJ04 414 aa21.45■■□□□ 1.02
C9orf78-206ENST00000492991 RRP7AQ9Y3A4 280 aaKnown RBP21.45■■□□□ 1.02
C9orf78-206ENST00000492991 SLX4Q8IY92 1834 aa21.44■■□□□ 1.02
C9orf78-206ENST00000492991 ZNF219Q9P2Y4 722 aaPredicted RBP21.44■■□□□ 1.02
C9orf78-206ENST00000492991 GTF2E1P29083 439 aaPredicted RBP21.43■■□□□ 1.02
C9orf78-206ENST00000492991 CCDC93Q567U6 631 aa21.43■■□□□ 1.02
C9orf78-206ENST00000492991 TTLL7Q6ZT98 887 aa21.43■■□□□ 1.02
C9orf78-206ENST00000492991 IBTKQ9P2D0 1353 aaPredicted RBP21.43■■□□□ 1.02
C9orf78-206ENST00000492991 CCDC88AQ3V6T2 1871 aa21.42■■□□□ 1.02
C9orf78-206ENST00000492991 CRY2Q49AN0 593 aa21.42■■□□□ 1.02
C9orf78-206ENST00000492991 NGEFQ8N5V2 710 aa21.42■■□□□ 1.02
C9orf78-206ENST00000492991 ARFGEF2Q9Y6D5 1785 aa21.42■■□□□ 1.02
C9orf78-206ENST00000492991 MYL6BP14649 208 aa21.41■■□□□ 1.02
C9orf78-206ENST00000492991 GIGYF2Q6Y7W6 1299 aaKnown RBP21.41■■□□□ 1.02
C9orf78-206ENST00000492991 ZNF34Q8IZ26 560 aa21.41■■□□□ 1.02
C9orf78-206ENST00000492991 RTKN2Q8IZC4 609 aa21.41■■□□□ 1.02
C9orf78-206ENST00000492991 DICER1Q9UPY3 1922 aaKnown RBP21.41■■□□□ 1.02
C9orf78-206ENST00000492991 RIC1Q4ADV7 1423 aa21.4■■□□□ 1.02
C9orf78-206ENST00000492991 POTECB2RU33 542 aa21.4■■□□□ 1.02
C9orf78-206ENST00000492991 PDIA6Q15084 440 aa21.4■■□□□ 1.02
C9orf78-206ENST00000492991 LRP10Q7Z4F1 713 aa21.4■■□□□ 1.02
C9orf78-206ENST00000492991 FAM177BA6PVY3 158 aa21.39■■□□□ 1.01
C9orf78-206ENST00000492991 FKBP4Q02790 459 aaKnown RBP eCLIP21.39■■□□□ 1.01
C9orf78-206ENST00000492991 RUNDC1Q96C34 613 aa21.39■■□□□ 1.01
C9orf78-206ENST00000492991 TIAM2Q8IVF5 1701 aa21.38■■□□□ 1.01
C9orf78-206ENST00000492991 WDR90Q96KV7 1748 aa21.38■■□□□ 1.01
C9orf78-206ENST00000492991 CHL1O00533 1208 aa21.38■■□□□ 1.01
C9orf78-206ENST00000492991 HOXA10P31260 410 aaPredicted RBP21.38■■□□□ 1.01
C9orf78-206ENST00000492991 PARP10Q53GL7 1025 aa21.38■■□□□ 1.01
C9orf78-206ENST00000492991 CC2D2BQ6DHV5 1058 aa21.38■■□□□ 1.01
C9orf78-206ENST00000492991 NUP98P52948 1817 aa21.37■■□□□ 1.01
C9orf78-206ENST00000492991 WDR43Q15061 677 aaKnown RBP eCLIP21.37■■□□□ 1.01
C9orf78-206ENST00000492991 GRIPAP1Q4V328 841 aa21.37■■□□□ 1.01
C9orf78-206ENST00000492991 ZBTB3Q9H5J0 574 aa21.37■■□□□ 1.01
C9orf78-206ENST00000492991 UBN2Q6ZU65 1347 aa21.36■■□□□ 1.01
C9orf78-206ENST00000492991 SUSD4Q5VX71 490 aa21.36■■□□□ 1.01
C9orf78-206ENST00000492991 PPP1R42Q7Z4L9 355 aa21.36■■□□□ 1.01
C9orf78-206ENST00000492991 EIF2S2P20042 333 aaKnown RBP21.35■■□□□ 1.01
C9orf78-206ENST00000492991 NUTM1Q86Y26 1132 aa21.35■■□□□ 1.01
C9orf78-206ENST00000492991 TRIM35Q9UPQ4 493 aa21.35■■□□□ 1.01
C9orf78-206ENST00000492991 ABCC12Q96J65 1359 aa21.35■■□□□ 1.01
C9orf78-206ENST00000492991 RNF123Q5XPI4 1314 aa21.34■■□□□ 1.01
C9orf78-206ENST00000492991 NTSR2O95665 410 aa21.34■■□□□ 1.01
C9orf78-206ENST00000492991 GPTP24298 496 aa21.34■■□□□ 1.01
C9orf78-206ENST00000492991 SLC10A5Q5PT55 438 aa21.34■■□□□ 1.01
C9orf78-206ENST00000492991 KLRG1Q96E93 195 aa21.34■■□□□ 1.01
C9orf78-206ENST00000492991 L3MBTL3Q96JM7 780 aaPredicted RBP21.34■■□□□ 1.01
C9orf78-206ENST00000492991 CRAMP1Q96RY5 1269 aa21.34■■□□□ 1.01
C9orf78-206ENST00000492991 PSMD1Q99460 953 aa21.34■■□□□ 1.01
C9orf78-206ENST00000492991 PRKRIP1Q9H875 184 aaPredicted RBP21.34■■□□□ 1.01
C9orf78-206ENST00000492991 ADAMTS8Q9UP79 889 aa21.34■■□□□ 1.01
C9orf78-206ENST00000492991 DDNO94850 711 aaPredicted RBP21.33■■□□□ 1.01
C9orf78-206ENST00000492991 HSP90AB3PQ58FF7 597 aa21.33■■□□□ 1.01
C9orf78-206ENST00000492991 JMYQ8N9B5 988 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms