RNA–Protein interactions for RNA: ENST00000492468.5

PABPC4-216, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 2,257 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-216ENST00000492468 RAB11FIP3O75154 756 aa17.61■□□□□ 0.41
PABPC4-216ENST00000492468 NUDT16Q96DE0 195 aaKnown RBP17.61■□□□□ 0.41
PABPC4-216ENST00000492468 OVOS2A0A0J9YW53 1432 aa17.61■□□□□ 0.41
PABPC4-216ENST00000492468 OVOS2Q6IE36 1432 aa17.61■□□□□ 0.41
PABPC4-216ENST00000492468 VPS37CA5D8V6 355 aaPredicted RBP17.6■□□□□ 0.41
PABPC4-216ENST00000492468 KRT85P78386 507 aa17.6■□□□□ 0.41
PABPC4-216ENST00000492468 NAA30Q147X3 362 aaPredicted RBP17.6■□□□□ 0.41
PABPC4-216ENST00000492468 ANO6Q4KMQ2 910 aa17.6■□□□□ 0.41
PABPC4-216ENST00000492468 CNTROBQ8N137 903 aa17.6■□□□□ 0.41
PABPC4-216ENST00000492468 TM6SF1Q9BZW5 370 aa17.6■□□□□ 0.41
PABPC4-216ENST00000492468 FMN2Q9NZ56 1722 aa17.6■□□□□ 0.41
PABPC4-216ENST00000492468 NRXN3Q9Y4C0 1643 aa17.6■□□□□ 0.41
PABPC4-216ENST00000492468 GTF2E1P29083 439 aaPredicted RBP17.6■□□□□ 0.41
PABPC4-216ENST00000492468 KCNB2Q92953 911 aa17.6■□□□□ 0.41
PABPC4-216ENST00000492468 ADGRL3Q9HAR2 1447 aa17.6■□□□□ 0.41
PABPC4-216ENST00000492468 USP44Q9H0E7 712 aa17.59■□□□□ 0.41
PABPC4-216ENST00000492468 ZSWIM6Q9HCJ5 1215 aa17.59■□□□□ 0.41
PABPC4-216ENST00000492468 PDRG1Q9NUG6 133 aa17.59■□□□□ 0.41
PABPC4-216ENST00000492468 NCKAP5LQ9HCH0 1330 aa17.59■□□□□ 0.41
PABPC4-216ENST00000492468 CDC25BP30305 580 aa17.59■□□□□ 0.41
PABPC4-216ENST00000492468 POLA2Q14181 598 aa17.59■□□□□ 0.41
PABPC4-216ENST00000492468 CAMK4Q16566 473 aa17.59■□□□□ 0.41
PABPC4-216ENST00000492468 CCDC61Q9Y6R9 512 aa17.59■□□□□ 0.41
PABPC4-216ENST00000492468 RAPGEF3O95398 923 aa17.58■□□□□ 0.4
PABPC4-216ENST00000492468 PDIA4P13667 645 aaKnown RBP17.58■□□□□ 0.4
PABPC4-216ENST00000492468 DRC7Q8IY82 874 aa17.58■□□□□ 0.4
PABPC4-216ENST00000492468 RHPN1Q8TCX5 695 aa17.58■□□□□ 0.4
PABPC4-216ENST00000492468 CACTINQ8WUQ7 758 aaKnown RBP17.58■□□□□ 0.4
PABPC4-216ENST00000492468 TRIM5Q9C035 493 aa17.58■□□□□ 0.4
PABPC4-216ENST00000492468 TNMDQ9H2S6 317 aa17.58■□□□□ 0.4
PABPC4-216ENST00000492468 FAM53CQ9NYF3 392 aa17.58■□□□□ 0.4
PABPC4-216ENST00000492468 SPG7Q9UQ90 795 aa17.58■□□□□ 0.4
PABPC4-216ENST00000492468 MAP3K5Q99683 1374 aa17.58■□□□□ 0.4
PABPC4-216ENST00000492468 USP42Q9H9J4 1324 aaKnown RBP17.58■□□□□ 0.4
PABPC4-216ENST00000492468 FOXO3O43524 673 aa17.58■□□□□ 0.4
PABPC4-216ENST00000492468 ME3Q16798 604 aa17.58■□□□□ 0.4
PABPC4-216ENST00000492468 ADCK5Q3MIX3 580 aa17.58■□□□□ 0.4
PABPC4-216ENST00000492468 ZNF397Q8NF99 534 aaPredicted RBP17.58■□□□□ 0.4
PABPC4-216ENST00000492468 DDX19AQ9NUU7 478 aaKnown RBP17.58■□□□□ 0.4
PABPC4-216ENST00000492468 TMEM51Q9NW97 253 aa17.58■□□□□ 0.4
PABPC4-216ENST00000492468 DTNBO60941 627 aa17.57■□□□□ 0.4
PABPC4-216ENST00000492468 UBTFL1P0CB47 393 aaPredicted RBP17.57■□□□□ 0.4
PABPC4-216ENST00000492468 TERF2Q15554 542 aa17.57■□□□□ 0.4
PABPC4-216ENST00000492468 CCDC30Q5VVM6 783 aa17.57■□□□□ 0.4
PABPC4-216ENST00000492468 CWC27Q6UX04 472 aaKnown RBP17.57■□□□□ 0.4
PABPC4-216ENST00000492468 CKAP2LQ8IYA6 745 aa17.57■□□□□ 0.4
PABPC4-216ENST00000492468 BBXQ8WY36 941 aaPredicted RBP17.57■□□□□ 0.4
PABPC4-216ENST00000492468 JAKMIP1Q96N16 626 aaKnown RBP17.57■□□□□ 0.4
PABPC4-216ENST00000492468 CLSTN2Q9H4D0 955 aa17.57■□□□□ 0.4
PABPC4-216ENST00000492468 DACT1Q9NYF0 836 aa17.57■□□□□ 0.4
PABPC4-216ENST00000492468 TTC21BQ7Z4L5 1316 aa17.56■□□□□ 0.4
PABPC4-216ENST00000492468 TPD52L1Q16890 204 aaPredicted RBP17.56■□□□□ 0.4
PABPC4-216ENST00000492468 MTHFSDQ2M296 383 aaKnown RBP17.56■□□□□ 0.4
PABPC4-216ENST00000492468 CDC37L1Q7L3B6 337 aa17.56■□□□□ 0.4
PABPC4-216ENST00000492468 KRT222Q8N1A0 295 aa17.56■□□□□ 0.4
PABPC4-216ENST00000492468 A2ML1A8K2U0 1454 aa17.56■□□□□ 0.4
PABPC4-216ENST00000492468 MAP3K19Q56UN5 1328 aa17.56■□□□□ 0.4
PABPC4-216ENST00000492468 CCDC144BQ3MJ40 725 aa17.56■□□□□ 0.4
PABPC4-216ENST00000492468 HSP90AB2PQ58FF8 381 aa17.56■□□□□ 0.4
PABPC4-216ENST00000492468 FBXO31Q5XUX0 539 aaPredicted RBP17.56■□□□□ 0.4
PABPC4-216ENST00000492468 CEP135Q66GS9 1140 aa17.56■□□□□ 0.4
PABPC4-216ENST00000492468 CCDC144CPQ8IYA2 1237 aa17.56■□□□□ 0.4
PABPC4-216ENST00000492468 CYP46A1Q9Y6A2 500 aa17.56■□□□□ 0.4
PABPC4-216ENST00000492468 NPHP3Q7Z494 1330 aa17.55■□□□□ 0.4
PABPC4-216ENST00000492468 SURF6O75683 361 aaKnown RBP17.55■□□□□ 0.4
PABPC4-216ENST00000492468 PTH1RQ03431 593 aa17.55■□□□□ 0.4
PABPC4-216ENST00000492468 PPP1R42Q7Z4L9 355 aa17.55■□□□□ 0.4
PABPC4-216ENST00000492468 KIF1BPQ96EK5 621 aa17.55■□□□□ 0.4
PABPC4-216ENST00000492468 KMT5BQ4FZB7 885 aa17.55■□□□□ 0.4
PABPC4-216ENST00000492468 LARP1BQ659C4 914 aaKnown RBP17.55■□□□□ 0.4
PABPC4-216ENST00000492468 CLIP2Q9UDT6 1046 aa17.55■□□□□ 0.4
PABPC4-216ENST00000492468 CHMP3Q9Y3E7 222 aa17.55■□□□□ 0.4
PABPC4-216ENST00000492468 RBM6P78332 1123 aaKnown RBP17.54■□□□□ 0.4
PABPC4-216ENST00000492468 SCAND2PQ9GZW5 306 aaPredicted RBP17.54■□□□□ 0.4
PABPC4-216ENST00000492468 KDRP35968 1356 aa17.54■□□□□ 0.4
PABPC4-216ENST00000492468 TOPAZ1Q8N9V7 1692 aa17.54■□□□□ 0.4
PABPC4-216ENST00000492468 PRPF40BQ6NWY9 871 aaKnown RBP17.54■□□□□ 0.4
PABPC4-216ENST00000492468 FAM173BQ6P4H8 233 aa17.54■□□□□ 0.4
PABPC4-216ENST00000492468 NYAP1Q6ZVC0 841 aa17.54■□□□□ 0.4
PABPC4-216ENST00000492468 NECAB1Q8N987 351 aa17.54■□□□□ 0.4
PABPC4-216ENST00000492468 PRR36Q9H6K5 1346 aa17.53■□□□□ 0.4
PABPC4-216ENST00000492468 ZNF165P49910 485 aa17.53■□□□□ 0.4
PABPC4-216ENST00000492468 SARM1Q6SZW1 724 aa17.53■□□□□ 0.4
PABPC4-216ENST00000492468 FERMT3Q86UX7 667 aa17.53■□□□□ 0.4
PABPC4-216ENST00000492468 RUFY2Q8WXA3 655 aa17.53■□□□□ 0.4
PABPC4-216ENST00000492468 TPCN1Q9ULQ1 816 aa17.53■□□□□ 0.4
PABPC4-216ENST00000492468 PPP6R1Q9UPN7 881 aa17.53■□□□□ 0.4
PABPC4-216ENST00000492468 TTC41PQ6P2S7 1318 aa17.53■□□□□ 0.4
PABPC4-216ENST00000492468 PDCP20941 246 aa17.52■□□□□ 0.4
PABPC4-216ENST00000492468 SLFNL1Q499Z3 407 aa17.52■□□□□ 0.4
PABPC4-216ENST00000492468 LRRC8AQ8IWT6 810 aa17.52■□□□□ 0.4
PABPC4-216ENST00000492468 OSCARQ8IYS5 282 aa17.52■□□□□ 0.4
PABPC4-216ENST00000492468 ZNF215Q9UL58 517 aaPredicted RBP17.52■□□□□ 0.4
PABPC4-216ENST00000492468 USP31Q70CQ4 1352 aa17.52■□□□□ 0.4
PABPC4-216ENST00000492468 ERBB3P21860 1342 aa17.52■□□□□ 0.4
PABPC4-216ENST00000492468 TECPR2O15040 1411 aa17.52■□□□□ 0.4
PABPC4-216ENST00000492468 CCDC66A2RUB6 948 aa17.52■□□□□ 0.4
PABPC4-216ENST00000492468 NEMFO60524 1076 aa17.52■□□□□ 0.4
PABPC4-216ENST00000492468 CAVIN2O95810 425 aa17.52■□□□□ 0.4
PABPC4-216ENST00000492468 NECTIN1Q15223 517 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms