RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 TRIM35Q9UPQ4 493 aa15.51■□□□□ 0.07
MDC1-207ENST00000492462 ARFGEF1Q9Y6D6 1849 aa15.5■□□□□ 0.07
MDC1-207ENST00000492462 NPM2Q86SE8 214 aaKnown RBP15.5■□□□□ 0.07
MDC1-207ENST00000492462 NGEFQ8N5V2 710 aa15.49■□□□□ 0.07
MDC1-207ENST00000492462 PIM2Q9P1W9 311 aa15.49■□□□□ 0.07
MDC1-207ENST00000492462 DLEC1Q9Y238 1755 aa15.49■□□□□ 0.07
MDC1-207ENST00000492462 LMOD3Q0VAK6 560 aa15.48■□□□□ 0.07
MDC1-207ENST00000492462 PRR5LQ6MZQ0 368 aa15.48■□□□□ 0.07
MDC1-207ENST00000492462 TOMM70O94826 608 aa15.47■□□□□ 0.07
MDC1-207ENST00000492462 COL11A2P13942 1736 aaPredicted RBP15.47■□□□□ 0.07
MDC1-207ENST00000492462 HTRA3P83110 453 aa15.47■□□□□ 0.07
MDC1-207ENST00000492462 HLFQ16534 295 aa15.47■□□□□ 0.07
MDC1-207ENST00000492462 KRT24Q2M2I5 525 aa15.47■□□□□ 0.07
MDC1-207ENST00000492462 DALRD3Q5D0E6 543 aaKnown RBP15.47■□□□□ 0.07
MDC1-207ENST00000492462 TTLL7Q6ZT98 887 aa15.47■□□□□ 0.07
MDC1-207ENST00000492462 ARHGAP27Q6ZUM4 889 aa15.47■□□□□ 0.07
MDC1-207ENST00000492462 SETDB2Q96T68 719 aa15.47■□□□□ 0.07
MDC1-207ENST00000492462 CHL1O00533 1208 aa15.46■□□□□ 0.07
MDC1-207ENST00000492462 APAF1O14727 1248 aa15.46■□□□□ 0.07
MDC1-207ENST00000492462 MYL6BP14649 208 aa15.46■□□□□ 0.07
MDC1-207ENST00000492462 C2CD5Q86YS7 1000 aa15.46■□□□□ 0.07
MDC1-207ENST00000492462 LAS1LQ9Y4W2 734 aaKnown RBP15.46■□□□□ 0.07
MDC1-207ENST00000492462 NUP98P52948 1817 aa15.45■□□□□ 0.06
MDC1-207ENST00000492462 ANXA1P04083 346 aa15.45■□□□□ 0.06
MDC1-207ENST00000492462 EIF2S2P20042 333 aaKnown RBP15.44■□□□□ 0.06
MDC1-207ENST00000492462 PDIA6Q15084 440 aa15.44■□□□□ 0.06
MDC1-207ENST00000492462 PROSER3Q2NL68 480 aa15.44■□□□□ 0.06
MDC1-207ENST00000492462 CLEC4GQ6UXB4 293 aa15.44■□□□□ 0.06
MDC1-207ENST00000492462 CNBD1Q8NA66 436 aa15.44■□□□□ 0.06
MDC1-207ENST00000492462 NECTIN2Q92692 538 aa15.44■□□□□ 0.06
MDC1-207ENST00000492462 BABAM1Q9NWV8 329 aa15.44■□□□□ 0.06
MDC1-207ENST00000492462 FAM177BA6PVY3 158 aa15.43■□□□□ 0.06
MDC1-207ENST00000492462 H0YIN7 160 aa15.43■□□□□ 0.06
MDC1-207ENST00000492462 LRP10Q7Z4F1 713 aa15.43■□□□□ 0.06
MDC1-207ENST00000492462 BRIP1Q9BX63 1249 aa15.43■□□□□ 0.06
MDC1-207ENST00000492462 NIP7Q9Y221 180 aaKnown RBP eCLIP15.43■□□□□ 0.06
MDC1-207ENST00000492462 ZNF652Q9Y2D9 606 aa15.43■□□□□ 0.06
MDC1-207ENST00000492462 SBF1O95248 1867 aa15.42■□□□□ 0.06
MDC1-207ENST00000492462 NBPF5PQ86XG9 351 aaPredicted RBP15.42■□□□□ 0.06
MDC1-207ENST00000492462 ZBTB3Q9H5J0 574 aa15.42■□□□□ 0.06
MDC1-207ENST00000492462 CACNA1SQ13698 1873 aa15.42■□□□□ 0.06
MDC1-207ENST00000492462 MAP3K15Q6ZN16 1313 aa15.42■□□□□ 0.06
MDC1-207ENST00000492462 TTLL6Q8N841 843 aa15.41■□□□□ 0.06
MDC1-207ENST00000492462 ERBB4Q15303 1308 aa15.41■□□□□ 0.06
MDC1-207ENST00000492462 RGL2O15211 777 aa15.4■□□□□ 0.06
MDC1-207ENST00000492462 NPHP1O15259 732 aa15.4■□□□□ 0.06
MDC1-207ENST00000492462 PDE6BP35913 854 aa15.4■□□□□ 0.06
MDC1-207ENST00000492462 ST5P78524 1137 aa15.4■□□□□ 0.06
MDC1-207ENST00000492462 RASSF7Q02833 373 aa15.4■□□□□ 0.06
MDC1-207ENST00000492462 KIF6Q6ZMV9 814 aa15.4■□□□□ 0.06
MDC1-207ENST00000492462 ZNF622Q969S3 477 aaKnown RBP eCLIP15.4■□□□□ 0.06
MDC1-207ENST00000492462 SLX4Q8IY92 1834 aa15.4■□□□□ 0.06
MDC1-207ENST00000492462 ERVV-1B6SEH8 477 aa15.39■□□□□ 0.05
MDC1-207ENST00000492462 ANP32CO43423 234 aa15.39■□□□□ 0.05
MDC1-207ENST00000492462 ZNF853P0CG23 659 aa15.39■□□□□ 0.05
MDC1-207ENST00000492462 GPTP24298 496 aa15.39■□□□□ 0.05
MDC1-207ENST00000492462 C9orf131Q5VYM1 1079 aa15.39■□□□□ 0.05
MDC1-207ENST00000492462 CFAP44Q96MT7 982 aa15.39■□□□□ 0.05
MDC1-207ENST00000492462 MRS2Q9HD23 443 aa15.39■□□□□ 0.05
MDC1-207ENST00000492462 MBIPQ9NS73 344 aa15.39■□□□□ 0.05
MDC1-207ENST00000492462 ZNF219Q9P2Y4 722 aaPredicted RBP15.39■□□□□ 0.05
MDC1-207ENST00000492462 CCDC88AQ3V6T2 1871 aa15.39■□□□□ 0.05
MDC1-207ENST00000492462 TNRC6CQ9HCJ0 1690 aaKnown RBP15.38■□□□□ 0.05
MDC1-207ENST00000492462 UBN2Q6ZU65 1347 aa15.38■□□□□ 0.05
MDC1-207ENST00000492462 ABCC12Q96J65 1359 aa15.37■□□□□ 0.05
MDC1-207ENST00000492462 HSPA1AP0DMV8 641 aaKnown RBP15.37■□□□□ 0.05
MDC1-207ENST00000492462 HSPA1BP0DMV9 641 aaKnown RBP15.37■□□□□ 0.05
MDC1-207ENST00000492462 SRGNP10124 158 aa15.37■□□□□ 0.05
MDC1-207ENST00000492462 TPTE2Q6XPS3 522 aa15.37■□□□□ 0.05
MDC1-207ENST00000492462 NUTM1Q86Y26 1132 aa15.37■□□□□ 0.05
MDC1-207ENST00000492462 XAGE3Q8WTP9 111 aa15.37■□□□□ 0.05
MDC1-207ENST00000492462 ARFGEF2Q9Y6D5 1785 aa15.36■□□□□ 0.05
MDC1-207ENST00000492462 NFKBIEO00221 500 aa15.36■□□□□ 0.05
MDC1-207ENST00000492462 C21orf2O43822 256 aa15.36■□□□□ 0.05
MDC1-207ENST00000492462 AIMP1Q12904 312 aaKnown RBP15.36■□□□□ 0.05
MDC1-207ENST00000492462 SUSD4Q5VX71 490 aa15.36■□□□□ 0.05
MDC1-207ENST00000492462 DUSP27Q5VZP5 1158 aa15.36■□□□□ 0.05
MDC1-207ENST00000492462 GIGYF2Q6Y7W6 1299 aaKnown RBP15.36■□□□□ 0.05
MDC1-207ENST00000492462 COPS6Q7L5N1 327 aa15.36■□□□□ 0.05
MDC1-207ENST00000492462 ZNF34Q8IZ26 560 aa15.36■□□□□ 0.05
MDC1-207ENST00000492462 RNF181Q9P0P0 153 aa15.36■□□□□ 0.05
MDC1-207ENST00000492462 CHPF2Q9P2E5 772 aa15.36■□□□□ 0.05
MDC1-207ENST00000492462 PDZRN3Q9UPQ7 1066 aa15.36■□□□□ 0.05
MDC1-207ENST00000492462 FER1L6Q2WGJ9 1857 aa15.35■□□□□ 0.05
MDC1-207ENST00000492462 KLRG2A4D1S0 409 aaPredicted RBP15.35■□□□□ 0.05
MDC1-207ENST00000492462 ERFEQ4G0M1 354 aa15.35■□□□□ 0.05
MDC1-207ENST00000492462 HDGFL1Q5TGJ6 251 aa15.35■□□□□ 0.05
MDC1-207ENST00000492462 STYK1Q6J9G0 422 aa15.35■□□□□ 0.05
MDC1-207ENST00000492462 MASTLQ96GX5 879 aa15.35■□□□□ 0.05
MDC1-207ENST00000492462 DDX21Q9NR30 783 aaKnown RBP eCLIP15.35■□□□□ 0.05
MDC1-207ENST00000492462 IFT57Q9NWB7 429 aa15.35■□□□□ 0.05
MDC1-207ENST00000492462 ANKRD36CQ5JPF3 1778 aa15.34■□□□□ 0.05
MDC1-207ENST00000492462 ELL2O00472 640 aaPredicted RBP15.34■□□□□ 0.05
MDC1-207ENST00000492462 GTF2E1P29083 439 aaPredicted RBP15.34■□□□□ 0.05
MDC1-207ENST00000492462 GNAI1P63096 354 aa15.34■□□□□ 0.05
MDC1-207ENST00000492462 PRPF40BQ6NWY9 871 aaKnown RBP15.34■□□□□ 0.05
MDC1-207ENST00000492462 RBM46Q8TBY0 533 aaKnown RBP15.34■□□□□ 0.05
MDC1-207ENST00000492462 HOXB7P09629 217 aa15.33■□□□□ 0.04
MDC1-207ENST00000492462 FAM161AQ3B820 660 aa15.33■□□□□ 0.04
MDC1-207ENST00000492462 C8orf58Q8NAV2 365 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms