RNA–Protein interactions for RNA: ENST00000492430.1

RBM5-222, Transcript of RNA binding motif protein 5, human

TSL 3

Gene RBM5, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM5-222	ENST00000492430	TM4SF1	P30408	202 aa		12.02	□□□□□ -0.49
RBM5-222	ENST00000492430	PDIA6	Q15084	440 aa		12.02	□□□□□ -0.49
RBM5-222	ENST00000492430	KRT24	Q2M2I5	525 aa		12.02	□□□□□ -0.49
RBM5-222	ENST00000492430	HDGFL1	Q5TGJ6	251 aa		12.02	□□□□□ -0.49
RBM5-222	ENST00000492430	MYH16	Q9H6N6	1097 aa		12.02	□□□□□ -0.49
RBM5-222	ENST00000492430	MAP3K15	Q6ZN16	1313 aa		12.02	□□□□□ -0.49
RBM5-222	ENST00000492430	POLRMT	O00411	1230 aa	Known RBP	12.01	□□□□□ -0.49
RBM5-222	ENST00000492430	DDR1	Q08345	913 aa		12.01	□□□□□ -0.49
RBM5-222	ENST00000492430	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.01	□□□□□ -0.49
RBM5-222	ENST00000492430	DBF4	Q9UBU7	674 aa	Predicted RBP	12.01	□□□□□ -0.49
RBM5-222	ENST00000492430	NFIX	Q14938	502 aa		12	□□□□□ -0.49
RBM5-222	ENST00000492430	KIF6	Q6ZMV9	814 aa		12	□□□□□ -0.49
RBM5-222	ENST00000492430	C8orf58	Q8NAV2	365 aa		12	□□□□□ -0.49
RBM5-222	ENST00000492430	TSR2	Q969E8	191 aa	Known RBP	12	□□□□□ -0.49
RBM5-222	ENST00000492430	SYT17	Q9BSW7	474 aa		12	□□□□□ -0.49
RBM5-222	ENST00000492430	PARP3	Q9Y6F1	533 aa		12	□□□□□ -0.49
RBM5-222	ENST00000492430		E9PSI1	815 aa		11.99	□□□□□ -0.49
RBM5-222	ENST00000492430	EIF2S2	P20042	333 aa	Known RBP	11.99	□□□□□ -0.49
RBM5-222	ENST00000492430	PIP4K2A	P48426	406 aa	Predicted RBP	11.99	□□□□□ -0.49
RBM5-222	ENST00000492430	GOLGA2	Q08379	1002 aa		11.99	□□□□□ -0.49
RBM5-222	ENST00000492430	PROSER3	Q2NL68	480 aa		11.99	□□□□□ -0.49
RBM5-222	ENST00000492430	TWISTNB	Q3B726	338 aa	Predicted RBP	11.99	□□□□□ -0.49
RBM5-222	ENST00000492430	CCDC30	Q5VVM6	783 aa		11.99	□□□□□ -0.49
RBM5-222	ENST00000492430	HYPK	Q9NX55	129 aa		11.99	□□□□□ -0.49
RBM5-222	ENST00000492430	CHPF2	Q9P2E5	772 aa		11.99	□□□□□ -0.49
RBM5-222	ENST00000492430	TBC1D2B	Q9UPU7	963 aa		11.99	□□□□□ -0.49
RBM5-222	ENST00000492430	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.99	□□□□□ -0.49
RBM5-222	ENST00000492430	FER1L6	Q2WGJ9	1857 aa		11.99	□□□□□ -0.49
RBM5-222	ENST00000492430	DICER1	Q9UPY3	1922 aa	Known RBP	11.98	□□□□□ -0.49
RBM5-222	ENST00000492430	SBF1	O95248	1867 aa		11.98	□□□□□ -0.49
RBM5-222	ENST00000492430	RNF123	Q5XPI4	1314 aa		11.98	□□□□□ -0.49
RBM5-222	ENST00000492430	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.98	□□□□□ -0.49
RBM5-222	ENST00000492430	GOLGB1	Q14789	3259 aa	Known RBP	11.98	□□□□□ -0.49
RBM5-222	ENST00000492430	LRRC37A	A6NMS7	1700 aa		11.97	□□□□□ -0.49
RBM5-222	ENST00000492430	MYL6B	P14649	208 aa		11.97	□□□□□ -0.49
RBM5-222	ENST00000492430	TGFB2	P61812	414 aa		11.97	□□□□□ -0.49
RBM5-222	ENST00000492430	HSP90AB3P	Q58FF7	597 aa		11.97	□□□□□ -0.49
RBM5-222	ENST00000492430	TBC1D9B	Q66K14	1250 aa		11.97	□□□□□ -0.49
RBM5-222	ENST00000492430	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.97	□□□□□ -0.49
RBM5-222	ENST00000492430	TTLL7	Q6ZT98	887 aa		11.97	□□□□□ -0.49
RBM5-222	ENST00000492430	TRMT2A	Q8IZ69	625 aa	Known RBP	11.97	□□□□□ -0.49
RBM5-222	ENST00000492430	TSPYL6	Q8N831	410 aa		11.97	□□□□□ -0.49
RBM5-222	ENST00000492430	CCDC88A	Q3V6T2	1871 aa		11.97	□□□□□ -0.49
RBM5-222	ENST00000492430	ZBED9	Q6R2W3	1325 aa		11.96	□□□□□ -0.49
RBM5-222	ENST00000492430	SLFN5	Q08AF3	891 aa		11.96	□□□□□ -0.49
RBM5-222	ENST00000492430	ZNF428	Q96B54	188 aa		11.96	□□□□□ -0.49
RBM5-222	ENST00000492430	SETDB2	Q96T68	719 aa		11.96	□□□□□ -0.49
RBM5-222	ENST00000492430	PDZRN3	Q9UPQ7	1066 aa		11.96	□□□□□ -0.49
RBM5-222	ENST00000492430	SALL2	Q9Y467	1007 aa	Predicted RBP	11.96	□□□□□ -0.49
RBM5-222	ENST00000492430	ANXA1	P04083	346 aa		11.95	□□□□□ -0.5
RBM5-222	ENST00000492430	SERPINB2	P05120	415 aa		11.95	□□□□□ -0.5
RBM5-222	ENST00000492430	CT47B1	P0C2W7	299 aa	Predicted RBP	11.95	□□□□□ -0.5
RBM5-222	ENST00000492430	EXOSC9	Q06265	439 aa	Known RBP	11.95	□□□□□ -0.5
RBM5-222	ENST00000492430	COPS6	Q7L5N1	327 aa		11.95	□□□□□ -0.5
RBM5-222	ENST00000492430	ZNF34	Q8IZ26	560 aa		11.95	□□□□□ -0.5
RBM5-222	ENST00000492430	PLBD2	Q8NHP8	589 aa		11.95	□□□□□ -0.5
RBM5-222	ENST00000492430	XAGE3	Q8WTP9	111 aa		11.95	□□□□□ -0.5
RBM5-222	ENST00000492430	STK31	Q9BXU1	1019 aa		11.95	□□□□□ -0.5
RBM5-222	ENST00000492430	SLX4	Q8IY92	1834 aa		11.95	□□□□□ -0.5
RBM5-222	ENST00000492430	UBN2	Q6ZU65	1347 aa		11.94	□□□□□ -0.5
RBM5-222	ENST00000492430	SENP3-EIF4A1	A0A087X0R7	540 aa		11.94	□□□□□ -0.5
RBM5-222	ENST00000492430	VAMP4	O75379	141 aa		11.94	□□□□□ -0.5
RBM5-222	ENST00000492430	HLF	Q16534	295 aa		11.94	□□□□□ -0.5
RBM5-222	ENST00000492430	PARP10	Q53GL7	1025 aa		11.94	□□□□□ -0.5
RBM5-222	ENST00000492430	PRR5L	Q6MZQ0	368 aa		11.94	□□□□□ -0.5
RBM5-222	ENST00000492430	CNBD1	Q8NA66	436 aa		11.94	□□□□□ -0.5
RBM5-222	ENST00000492430	NLGN2	Q8NFZ4	835 aa		11.94	□□□□□ -0.5
RBM5-222	ENST00000492430	NYX	Q9GZU5	481 aa		11.94	□□□□□ -0.5
RBM5-222	ENST00000492430	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
RBM5-222	ENST00000492430	TIAM2	Q8IVF5	1701 aa		11.94	□□□□□ -0.5
RBM5-222	ENST00000492430	UTRN	P46939	3433 aa		11.93	□□□□□ -0.5
RBM5-222	ENST00000492430	ELL2	O00472	640 aa	Predicted RBP	11.93	□□□□□ -0.5
RBM5-222	ENST00000492430	NECTIN2	Q92692	538 aa		11.93	□□□□□ -0.5
RBM5-222	ENST00000492430	ZBTB3	Q9H5J0	574 aa		11.93	□□□□□ -0.5
RBM5-222	ENST00000492430	ADCY9	O60503	1353 aa		11.92	□□□□□ -0.5
RBM5-222	ENST00000492430		A0A1B0GUL6	1792 aa		11.92	□□□□□ -0.5
RBM5-222	ENST00000492430	DDX58	O95786	925 aa	Known RBP	11.92	□□□□□ -0.5
RBM5-222	ENST00000492430	ST5	P78524	1137 aa		11.92	□□□□□ -0.5
RBM5-222	ENST00000492430	TRIM28	Q13263	835 aa	Known RBP	11.92	□□□□□ -0.5
RBM5-222	ENST00000492430	ANKRD13D	Q6ZTN6	518 aa		11.92	□□□□□ -0.5
RBM5-222	ENST00000492430	BRIP1	Q9BX63	1249 aa		11.92	□□□□□ -0.5
RBM5-222	ENST00000492430	SPEF2	Q9C093	1822 aa		11.92	□□□□□ -0.5
RBM5-222	ENST00000492430	ABCC12	Q96J65	1359 aa		11.92	□□□□□ -0.5
RBM5-222	ENST00000492430	KLRG2	A4D1S0	409 aa	Predicted RBP	11.91	□□□□□ -0.5
RBM5-222	ENST00000492430	NTSR2	O95665	410 aa		11.91	□□□□□ -0.5
RBM5-222	ENST00000492430	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
RBM5-222	ENST00000492430	TCIRG1	Q13488	830 aa		11.91	□□□□□ -0.5
RBM5-222	ENST00000492430	TPTE2	Q6XPS3	522 aa		11.91	□□□□□ -0.5
RBM5-222	ENST00000492430	BICDL1	Q6ZP65	573 aa		11.91	□□□□□ -0.5
RBM5-222	ENST00000492430	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.91	□□□□□ -0.5
RBM5-222	ENST00000492430	KLHL34	Q8N239	644 aa		11.91	□□□□□ -0.5
RBM5-222	ENST00000492430	ISCA1	Q9BUE6	129 aa		11.91	□□□□□ -0.5
RBM5-222	ENST00000492430	TAF1	P21675	1872 aa		11.91	□□□□□ -0.5
RBM5-222	ENST00000492430	PDE6B	P35913	854 aa		11.9	□□□□□ -0.5
RBM5-222	ENST00000492430	LTBP1	Q14766	1721 aa		11.9	□□□□□ -0.5
RBM5-222	ENST00000492430	PPP1R42	Q7Z4L9	355 aa		11.9	□□□□□ -0.5
RBM5-222	ENST00000492430	PHAX	Q9H814	394 aa	Known RBP	11.9	□□□□□ -0.5
RBM5-222	ENST00000492430	DCAF8L1	A6NGE4	600 aa		11.89	□□□□□ -0.51
RBM5-222	ENST00000492430	KCNA3	P22001	575 aa		11.89	□□□□□ -0.51
RBM5-222	ENST00000492430	BRPF1	P55201	1214 aa	Predicted RBP	11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms