RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 ANKRD26Q9UPS8 1709 aa16.21■□□□□ 0.19
CACNA1C-228ENST00000492150 BCORQ6W2J9 1755 aa16.21■□□□□ 0.18
CACNA1C-228ENST00000492150 NOGQ13253 232 aa16.2■□□□□ 0.18
CACNA1C-228ENST00000492150 CNKSR1Q969H4 720 aa16.2■□□□□ 0.18
CACNA1C-228ENST00000492150 CUL9Q8IWT3 2517 aa16.19■□□□□ 0.18
CACNA1C-228ENST00000492150 FZD9O00144 591 aa16.19■□□□□ 0.18
CACNA1C-228ENST00000492150 CTU1Q7Z7A3 348 aaKnown RBP16.19■□□□□ 0.18
CACNA1C-228ENST00000492150 POLKQ9UBT6 870 aa16.19■□□□□ 0.18
CACNA1C-228ENST00000492150 AKAP11Q9UKA4 1901 aa16.19■□□□□ 0.18
CACNA1C-228ENST00000492150 BCL2L12Q9HB09 334 aa16.18■□□□□ 0.18
CACNA1C-228ENST00000492150 HPS5Q9UPZ3 1129 aa16.18■□□□□ 0.18
CACNA1C-228ENST00000492150 HSP90AB1P08238 724 aaKnown RBP16.17■□□□□ 0.18
CACNA1C-228ENST00000492150 STYK1Q6J9G0 422 aa16.17■□□□□ 0.18
CACNA1C-228ENST00000492150 PRPF40BQ6NWY9 871 aaKnown RBP16.17■□□□□ 0.18
CACNA1C-228ENST00000492150 COL15A1P39059 1388 aa16.16■□□□□ 0.18
CACNA1C-228ENST00000492150 TRAF5O00463 557 aa16.16■□□□□ 0.18
CACNA1C-228ENST00000492150 FKBP4Q02790 459 aaKnown RBP eCLIP16.16■□□□□ 0.18
CACNA1C-228ENST00000492150 EIF4A2Q14240 407 aaKnown RBP16.16■□□□□ 0.18
CACNA1C-228ENST00000492150 PKN2Q16513 984 aaKnown RBP16.16■□□□□ 0.18
CACNA1C-228ENST00000492150 PTCD1O75127 700 aaKnown RBP16.15■□□□□ 0.18
CACNA1C-228ENST00000492150 CCDC93Q567U6 631 aa16.15■□□□□ 0.18
CACNA1C-228ENST00000492150 AKAP4Q5JQC9 854 aa16.15■□□□□ 0.18
CACNA1C-228ENST00000492150 USP50Q70EL3 339 aaPredicted RBP16.15■□□□□ 0.18
CACNA1C-228ENST00000492150 C7orf43Q8WVR3 580 aa16.15■□□□□ 0.18
CACNA1C-228ENST00000492150 MKI67P46013 3256 aaKnown RBP16.15■□□□□ 0.18
CACNA1C-228ENST00000492150 SLC17A8Q8NDX2 589 aa16.14■□□□□ 0.17
CACNA1C-228ENST00000492150 SZT2Q5T011 3432 aa16.14■□□□□ 0.17
CACNA1C-228ENST00000492150 SCN11AQ9UI33 1791 aa16.13■□□□□ 0.17
CACNA1C-228ENST00000492150 CELF2O95319 508 aaKnown RBP16.13■□□□□ 0.17
CACNA1C-228ENST00000492150 LMOD1P29536 600 aaPredicted RBP16.13■□□□□ 0.17
CACNA1C-228ENST00000492150 SRGNP10124 158 aa16.12■□□□□ 0.17
CACNA1C-228ENST00000492150 BICDL1Q6ZP65 573 aa16.12■□□□□ 0.17
CACNA1C-228ENST00000492150 MASTLQ96GX5 879 aa16.12■□□□□ 0.17
CACNA1C-228ENST00000492150 PITPNM2Q9BZ72 1349 aa16.12■□□□□ 0.17
CACNA1C-228ENST00000492150 TNNT2P45379 298 aaPredicted RBP16.11■□□□□ 0.17
CACNA1C-228ENST00000492150 CABP4P57796 275 aa16.11■□□□□ 0.17
CACNA1C-228ENST00000492150 PRR5LQ6MZQ0 368 aa16.11■□□□□ 0.17
CACNA1C-228ENST00000492150 ZIC5Q96T25 663 aa16.11■□□□□ 0.17
CACNA1C-228ENST00000492150 ZNF277Q9NRM2 450 aaPredicted RBP16.11■□□□□ 0.17
CACNA1C-228ENST00000492150 SCNN1DP51172 638 aa16.1■□□□□ 0.17
CACNA1C-228ENST00000492150 SCN7AQ01118 1682 aa16.1■□□□□ 0.17
CACNA1C-228ENST00000492150 A0A0C4DFX4 3053 aa16.09■□□□□ 0.17
CACNA1C-228ENST00000492150 IARSP41252 1262 aaKnown RBP16.09■□□□□ 0.17
CACNA1C-228ENST00000492150 EPS15P42566 896 aa16.08■□□□□ 0.16
CACNA1C-228ENST00000492150 PLEKHO1Q53GL0 409 aaPredicted RBP16.08■□□□□ 0.16
CACNA1C-228ENST00000492150 ZNF530Q6P9A1 599 aaPredicted RBP16.08■□□□□ 0.16
CACNA1C-228ENST00000492150 RTKN2Q8IZC4 609 aa16.08■□□□□ 0.16
CACNA1C-228ENST00000492150 RNF186Q9NXI6 227 aa16.08■□□□□ 0.16
CACNA1C-228ENST00000492150 RBBP6Q7Z6E9 1792 aaKnown RBP16.08■□□□□ 0.16
CACNA1C-228ENST00000492150 CYP19A1P11511 503 aaPredicted RBP16.07■□□□□ 0.16
CACNA1C-228ENST00000492150 DNAJC10Q8IXB1 793 aa16.07■□□□□ 0.16
CACNA1C-228ENST00000492150 FAM155AB1AL88 458 aaPredicted RBP16.06■□□□□ 0.16
CACNA1C-228ENST00000492150 EIF6P56537 245 aaKnown RBP16.06■□□□□ 0.16
CACNA1C-228ENST00000492150 JDP2Q8WYK2 163 aa16.06■□□□□ 0.16
CACNA1C-228ENST00000492150 TRIOBPQ9H2D6 2365 aa16.06■□□□□ 0.16
CACNA1C-228ENST00000492150 TRPA1O75762 1119 aa16.05■□□□□ 0.16
CACNA1C-228ENST00000492150 AMOTQ4VCS5 1084 aa16.05■□□□□ 0.16
CACNA1C-228ENST00000492150 AEBP1Q8IUX7 1158 aa16.05■□□□□ 0.16
CACNA1C-228ENST00000492150 POLR3GLQ9BT43 218 aa16.05■□□□□ 0.16
CACNA1C-228ENST00000492150 PGAP2Q9UHJ9 254 aa16.05■□□□□ 0.16
CACNA1C-228ENST00000492150 ZBTB1Q9Y2K1 713 aa16.05■□□□□ 0.16
CACNA1C-228ENST00000492150 SNED1Q8TER0 1413 aa16.04■□□□□ 0.16
CACNA1C-228ENST00000492150 MTHFSP49914 203 aa16.04■□□□□ 0.16
CACNA1C-228ENST00000492150 MNX1P50219 401 aaPredicted RBP16.04■□□□□ 0.16
CACNA1C-228ENST00000492150 TBC1D9BQ66K14 1250 aa16.04■□□□□ 0.16
CACNA1C-228ENST00000492150 NFATC2IPQ8NCF5 419 aa16.04■□□□□ 0.16
CACNA1C-228ENST00000492150 CNBD1Q8NA66 436 aa16.03■□□□□ 0.16
CACNA1C-228ENST00000492150 CCDC102AQ96A19 550 aa16.03■□□□□ 0.16
CACNA1C-228ENST00000492150 PSMD1Q99460 953 aa16.03■□□□□ 0.16
CACNA1C-228ENST00000492150 ADARB2Q9NS39 739 aaKnown RBP16.03■□□□□ 0.16
CACNA1C-228ENST00000492150 COLQQ9Y215 455 aaPredicted RBP16.03■□□□□ 0.16
CACNA1C-228ENST00000492150 GJA3Q9Y6H8 435 aa16.03■□□□□ 0.16
CACNA1C-228ENST00000492150 COL4A5P29400 1685 aa16.02■□□□□ 0.16
CACNA1C-228ENST00000492150 HUNKP57058 714 aa16.02■□□□□ 0.16
CACNA1C-228ENST00000492150 ST5P78524 1137 aa16.02■□□□□ 0.16
CACNA1C-228ENST00000492150 RGMBQ6NW40 437 aa16.02■□□□□ 0.16
CACNA1C-228ENST00000492150 FBXO46Q6PJ61 603 aaPredicted RBP16.02■□□□□ 0.16
CACNA1C-228ENST00000492150 SYNE4Q8N205 404 aa16.02■□□□□ 0.16
CACNA1C-228ENST00000492150 TIMELESSQ9UNS1 1208 aa16.02■□□□□ 0.16
CACNA1C-228ENST00000492150 COL6A3P12111 3177 aa16.02■□□□□ 0.15
CACNA1C-228ENST00000492150 A0A087WZG4 1122 aa16.01■□□□□ 0.15
CACNA1C-228ENST00000492150 KIF23Q02241 960 aaPredicted RBP16.01■□□□□ 0.15
CACNA1C-228ENST00000492150 C1orf141Q5JVX7 400 aa16.01■□□□□ 0.15
CACNA1C-228ENST00000492150 REM2Q8IYK8 340 aaPredicted RBP16.01■□□□□ 0.15
CACNA1C-228ENST00000492150 CCDC24Q8N4L8 307 aa16.01■□□□□ 0.15
CACNA1C-228ENST00000492150 ZC3H15Q8WU90 426 aaKnown RBP16.01■□□□□ 0.15
CACNA1C-228ENST00000492150 GLIS2Q9BZE0 524 aaPredicted RBP16.01■□□□□ 0.15
CACNA1C-228ENST00000492150 PANK3Q9H999 370 aa16.01■□□□□ 0.15
CACNA1C-228ENST00000492150 NPR1P16066 1061 aa16■□□□□ 0.15
CACNA1C-228ENST00000492150 EIF5P55010 431 aaKnown RBP15.99■□□□□ 0.15
CACNA1C-228ENST00000492150 SULT6B1Q6IMI4 303 aa15.99■□□□□ 0.15
CACNA1C-228ENST00000492150 CDC37L1Q7L3B6 337 aa15.99■□□□□ 0.15
CACNA1C-228ENST00000492150 ZNF408Q9H9D4 720 aa15.99■□□□□ 0.15
CACNA1C-228ENST00000492150 GPRC5DQ9NZD1 345 aa15.99■□□□□ 0.15
CACNA1C-228ENST00000492150 KLRG2A4D1S0 409 aaPredicted RBP15.98■□□□□ 0.15
CACNA1C-228ENST00000492150 HDAC9Q9UKV0 1011 aa15.98■□□□□ 0.15
CACNA1C-228ENST00000492150 TRIM26Q12899 539 aaPredicted RBP15.97■□□□□ 0.15
CACNA1C-228ENST00000492150 NOM1Q5C9Z4 860 aaKnown RBP15.97■□□□□ 0.15
CACNA1C-228ENST00000492150 MORC1Q86VD1 984 aa15.97■□□□□ 0.15
CACNA1C-228ENST00000492150 VSIG10Q8N0Z9 540 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms