RNA–Protein interactions for RNA: ENST00000492142.5

TRO-223, Transcript of trophinin, human

TSL 3

Gene TRO, Length 485 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRO-223	ENST00000492142	COL5A3	P25940	1745 aa	Predicted RBP	12.4	□□□□□ -0.42
TRO-223	ENST00000492142	TAF1L	Q8IZX4	1826 aa		12.4	□□□□□ -0.42
TRO-223	ENST00000492142		F6X3S4	739 aa		12.4	□□□□□ -0.42
TRO-223	ENST00000492142	RPS6KA4	O75676	772 aa		12.4	□□□□□ -0.42
TRO-223	ENST00000492142	DDX58	O95786	925 aa	Known RBP	12.4	□□□□□ -0.42
TRO-223	ENST00000492142	TRIM27	P14373	513 aa		12.4	□□□□□ -0.42
TRO-223	ENST00000492142	HMGB2	P26583	209 aa	Known RBP	12.4	□□□□□ -0.42
TRO-223	ENST00000492142	EIF5	P55010	431 aa	Known RBP	12.4	□□□□□ -0.42
TRO-223	ENST00000492142	C20orf194	Q5TEA3	1177 aa		12.4	□□□□□ -0.42
TRO-223	ENST00000492142	RIC3	Q7Z5B4	369 aa		12.4	□□□□□ -0.42
TRO-223	ENST00000492142	PANK1	Q8TE04	598 aa		12.4	□□□□□ -0.42
TRO-223	ENST00000492142	ARHGAP45	Q92619	1136 aa		12.4	□□□□□ -0.42
TRO-223	ENST00000492142	TBC1D2B	Q9UPU7	963 aa		12.4	□□□□□ -0.42
TRO-223	ENST00000492142	PI4KAP2	A4QPH2	592 aa		12.39	□□□□□ -0.43
TRO-223	ENST00000492142	PHF14	O94880	888 aa		12.39	□□□□□ -0.43
TRO-223	ENST00000492142	SLC4A10	Q6U841	1118 aa		12.39	□□□□□ -0.43
TRO-223	ENST00000492142	KSR2	Q6VAB6	950 aa		12.39	□□□□□ -0.43
TRO-223	ENST00000492142	ANKRD13D	Q6ZTN6	518 aa		12.39	□□□□□ -0.43
TRO-223	ENST00000492142	DZIP1L	Q8IYY4	767 aa	Known RBP	12.39	□□□□□ -0.43
TRO-223	ENST00000492142	PI4KAP1	Q8N8J0	262 aa		12.39	□□□□□ -0.43
TRO-223	ENST00000492142	MAP3K2	Q9Y2U5	619 aa		12.39	□□□□□ -0.43
TRO-223	ENST00000492142	RTCB	Q9Y3I0	505 aa	Known RBP	12.39	□□□□□ -0.43
TRO-223	ENST00000492142	CIC	Q96RK0	1608 aa	Predicted RBP	12.39	□□□□□ -0.43
TRO-223	ENST00000492142	C4B	P0C0L5	1744 aa		12.38	□□□□□ -0.43
TRO-223	ENST00000492142		A0A087WZG4	1122 aa		12.38	□□□□□ -0.43
TRO-223	ENST00000492142	RLBP1	P12271	317 aa		12.38	□□□□□ -0.43
TRO-223	ENST00000492142	ZNF827	Q17R98	1081 aa		12.38	□□□□□ -0.43
TRO-223	ENST00000492142	KIF6	Q6ZMV9	814 aa		12.38	□□□□□ -0.43
TRO-223	ENST00000492142	AMIGO3	Q86WK7	504 aa		12.38	□□□□□ -0.43
TRO-223	ENST00000492142	DZIP3	Q86Y13	1208 aa	Known RBP	12.38	□□□□□ -0.43
TRO-223	ENST00000492142	FTSJ3	Q8IY81	847 aa	Known RBP	12.38	□□□□□ -0.43
TRO-223	ENST00000492142	ZBTB3	Q9H5J0	574 aa		12.38	□□□□□ -0.43
TRO-223	ENST00000492142	TFCP2L1	Q9NZI6	479 aa		12.38	□□□□□ -0.43
TRO-223	ENST00000492142	MS4A1	P11836	297 aa		12.37	□□□□□ -0.43
TRO-223	ENST00000492142	PDE3A	Q14432	1141 aa		12.37	□□□□□ -0.43
TRO-223	ENST00000492142	TRAPPC3L	Q5T215	181 aa		12.37	□□□□□ -0.43
TRO-223	ENST00000492142	PLBD2	Q8NHP8	589 aa		12.37	□□□□□ -0.43
TRO-223	ENST00000492142	DNAAF4	Q8WXU2	420 aa		12.37	□□□□□ -0.43
TRO-223	ENST00000492142	AKT1S1	Q96B36	256 aa		12.37	□□□□□ -0.43
TRO-223	ENST00000492142	RREB1	Q92766	1687 aa		12.36	□□□□□ -0.43
TRO-223	ENST00000492142	ADCY9	O60503	1353 aa		12.36	□□□□□ -0.43
TRO-223	ENST00000492142	COL15A1	P39059	1388 aa		12.36	□□□□□ -0.43
TRO-223	ENST00000492142	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	12.36	□□□□□ -0.43
TRO-223	ENST00000492142	NEFL	P07196	543 aa		12.36	□□□□□ -0.43
TRO-223	ENST00000492142	HLF	Q16534	295 aa		12.36	□□□□□ -0.43
TRO-223	ENST00000492142	TMEM57	Q8N5G2	664 aa		12.36	□□□□□ -0.43
TRO-223	ENST00000492142	ARHGEF1	Q92888	912 aa	Known RBP	12.36	□□□□□ -0.43
TRO-223	ENST00000492142	STK32B	Q9NY57	414 aa		12.36	□□□□□ -0.43
TRO-223	ENST00000492142	COG6	Q9Y2V7	657 aa		12.36	□□□□□ -0.43
TRO-223	ENST00000492142	MAP3K15	Q6ZN16	1313 aa		12.36	□□□□□ -0.43
TRO-223	ENST00000492142	RGPD3	A6NKT7	1758 aa	Predicted RBP	12.35	□□□□□ -0.43
TRO-223	ENST00000492142	RGPD4	Q7Z3J3	1758 aa		12.35	□□□□□ -0.43
TRO-223	ENST00000492142	RFC4	P35249	363 aa		12.35	□□□□□ -0.43
TRO-223	ENST00000492142	CRBN	Q96SW2	442 aa		12.35	□□□□□ -0.43
TRO-223	ENST00000492142	MYD88	Q99836	296 aa		12.35	□□□□□ -0.43
TRO-223	ENST00000492142	METTL22	Q9BUU2	404 aa	Predicted RBP	12.35	□□□□□ -0.43
TRO-223	ENST00000492142	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.35	□□□□□ -0.43
TRO-223	ENST00000492142	SRP68	Q9UHB9	627 aa	Known RBP	12.35	□□□□□ -0.43
TRO-223	ENST00000492142	ABCC4	O15439	1325 aa		12.35	□□□□□ -0.43
TRO-223	ENST00000492142	ERVV-1	B6SEH8	477 aa		12.34	□□□□□ -0.43
TRO-223	ENST00000492142	ATP5J2-PTCD1	G3V325	749 aa		12.34	□□□□□ -0.43
TRO-223	ENST00000492142	ZPR1	O75312	459 aa		12.34	□□□□□ -0.43
TRO-223	ENST00000492142	CAMTA2	O94983	1202 aa		12.34	□□□□□ -0.43
TRO-223	ENST00000492142	NEXN	Q0ZGT2	675 aa		12.34	□□□□□ -0.43
TRO-223	ENST00000492142	SLC15A2	Q16348	729 aa		12.34	□□□□□ -0.43
TRO-223	ENST00000492142	ITPRIP	Q8IWB1	547 aa		12.34	□□□□□ -0.43
TRO-223	ENST00000492142	NARF	Q9UHQ1	456 aa		12.34	□□□□□ -0.43
TRO-223	ENST00000492142	SSFA2	P28290	1259 aa		12.33	□□□□□ -0.44
TRO-223	ENST00000492142	CCT4	P50991	539 aa	Known RBP	12.33	□□□□□ -0.44
TRO-223	ENST00000492142	TCIRG1	Q13488	830 aa		12.33	□□□□□ -0.44
TRO-223	ENST00000492142	FKBP8	Q14318	412 aa		12.33	□□□□□ -0.44
TRO-223	ENST00000492142	BEND3	Q5T5X7	828 aa		12.33	□□□□□ -0.44
TRO-223	ENST00000492142	USPL1	Q5W0Q7	1092 aa		12.33	□□□□□ -0.44
TRO-223	ENST00000492142	INTS3	Q68E01	1043 aa	Known RBP	12.33	□□□□□ -0.44
TRO-223	ENST00000492142	GIGYF2	Q6Y7W6	1299 aa	Known RBP	12.33	□□□□□ -0.44
TRO-223	ENST00000492142	COL23A1	Q86Y22	540 aa	Predicted RBP	12.33	□□□□□ -0.44
TRO-223	ENST00000492142	SRCIN1	Q9C0H9	1055 aa		12.33	□□□□□ -0.44
TRO-223	ENST00000492142	UBR3	Q6ZT12	1888 aa		12.32	□□□□□ -0.44
TRO-223	ENST00000492142	GPT	P24298	496 aa		12.32	□□□□□ -0.44
TRO-223	ENST00000492142	MVP	Q14764	893 aa	Known RBP	12.32	□□□□□ -0.44
TRO-223	ENST00000492142	CWF19L2	Q2TBE0	894 aa	Known RBP	12.32	□□□□□ -0.44
TRO-223	ENST00000492142	FLAD1	Q8NFF5	587 aa		12.32	□□□□□ -0.44
TRO-223	ENST00000492142	LINS1	Q8NG48	757 aa		12.32	□□□□□ -0.44
TRO-223	ENST00000492142	EXOC6	Q8TAG9	804 aa		12.32	□□□□□ -0.44
TRO-223	ENST00000492142	NUP188	Q5SRE5	1749 aa		12.31	□□□□□ -0.44
TRO-223	ENST00000492142	IGKV5-2	P06315	115 aa		12.31	□□□□□ -0.44
TRO-223	ENST00000492142	BCL2L12	Q9HB09	334 aa		12.31	□□□□□ -0.44
TRO-223	ENST00000492142	ZNF652	Q9Y2D9	606 aa		12.31	□□□□□ -0.44
TRO-223	ENST00000492142	PNPLA7	Q6ZV29	1317 aa		12.31	□□□□□ -0.44
TRO-223	ENST00000492142	USP42	Q9H9J4	1324 aa	Known RBP	12.31	□□□□□ -0.44
TRO-223	ENST00000492142	ARFGEF2	Q9Y6D5	1785 aa		12.3	□□□□□ -0.44
TRO-223	ENST00000492142	NEURL1B	A8MQ27	555 aa		12.3	□□□□□ -0.44
TRO-223	ENST00000492142	ALDH1L1	O75891	902 aa		12.3	□□□□□ -0.44
TRO-223	ENST00000492142	HSP90AB3P	Q58FF7	597 aa		12.3	□□□□□ -0.44
TRO-223	ENST00000492142	BICDL1	Q6ZP65	573 aa		12.3	□□□□□ -0.44
TRO-223	ENST00000492142	JARID2	Q92833	1246 aa	Predicted RBP	12.3	□□□□□ -0.44
TRO-223	ENST00000492142	ISCA1	Q9BUE6	129 aa		12.3	□□□□□ -0.44
TRO-223	ENST00000492142	NUP98	P52948	1817 aa		12.3	□□□□□ -0.44
TRO-223	ENST00000492142	FAM177B	A6PVY3	158 aa		12.29	□□□□□ -0.44
TRO-223	ENST00000492142	TBC1D9B	Q66K14	1250 aa		12.29	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms