RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 BABAM1Q9NWV8 329 aa11.1□□□□□ -0.63
SMARCB1-207ENST00000491967 NUP98P52948 1817 aa11.09□□□□□ -0.63
SMARCB1-207ENST00000491967 ERVV-1B6SEH8 477 aa11.09□□□□□ -0.63
SMARCB1-207ENST00000491967 NFKBIEO00221 500 aa11.09□□□□□ -0.63
SMARCB1-207ENST00000491967 NEFMP07197 916 aa11.09□□□□□ -0.63
SMARCB1-207ENST00000491967 CNBD1Q8NA66 436 aa11.09□□□□□ -0.63
SMARCB1-207ENST00000491967 RBM46Q8TBY0 533 aaKnown RBP11.09□□□□□ -0.63
SMARCB1-207ENST00000491967 RNF181Q9P0P0 153 aa11.09□□□□□ -0.63
SMARCB1-207ENST00000491967 ZNF330Q9Y3S2 320 aaPredicted RBP11.09□□□□□ -0.63
SMARCB1-207ENST00000491967 LTBP3Q9NS15 1303 aa11.09□□□□□ -0.63
SMARCB1-207ENST00000491967 TNRC6CQ9HCJ0 1690 aaKnown RBP11.08□□□□□ -0.64
SMARCB1-207ENST00000491967 RASSF7Q02833 373 aa11.08□□□□□ -0.64
SMARCB1-207ENST00000491967 LRP10Q7Z4F1 713 aa11.08□□□□□ -0.64
SMARCB1-207ENST00000491967 NPM2Q86SE8 214 aaKnown RBP11.08□□□□□ -0.64
SMARCB1-207ENST00000491967 CNKSR1Q969H4 720 aa11.08□□□□□ -0.64
SMARCB1-207ENST00000491967 THUMPD2Q9BTF0 503 aaKnown RBP11.08□□□□□ -0.64
SMARCB1-207ENST00000491967 ZNF652Q9Y2D9 606 aa11.08□□□□□ -0.64
SMARCB1-207ENST00000491967 KDM2BQ8NHM5 1336 aa11.08□□□□□ -0.64
SMARCB1-207ENST00000491967 GLTPD2A6NH11 291 aa11.07□□□□□ -0.64
SMARCB1-207ENST00000491967 TMPOP42166 694 aaKnown RBP11.07□□□□□ -0.64
SMARCB1-207ENST00000491967 DDX10Q13206 875 aaKnown RBP11.07□□□□□ -0.64
SMARCB1-207ENST00000491967 HLFQ16534 295 aa11.07□□□□□ -0.64
SMARCB1-207ENST00000491967 TPTE2Q6XPS3 522 aa11.07□□□□□ -0.64
SMARCB1-207ENST00000491967 CCDC24Q8N4L8 307 aa11.07□□□□□ -0.64
SMARCB1-207ENST00000491967 MASTLQ96GX5 879 aa11.07□□□□□ -0.64
SMARCB1-207ENST00000491967 ERBB4Q15303 1308 aa11.07□□□□□ -0.64
SMARCB1-207ENST00000491967 MYBBP1AQ9BQG0 1328 aaKnown RBP11.07□□□□□ -0.64
SMARCB1-207ENST00000491967 ST5P78524 1137 aa11.06□□□□□ -0.64
SMARCB1-207ENST00000491967 PDIA6Q15084 440 aa11.06□□□□□ -0.64
SMARCB1-207ENST00000491967 NBPF5PQ86XG9 351 aaPredicted RBP11.06□□□□□ -0.64
SMARCB1-207ENST00000491967 DNAJC5GQ8N7S2 189 aa11.06□□□□□ -0.64
SMARCB1-207ENST00000491967 ZNF622Q969S3 477 aaKnown RBP eCLIP11.06□□□□□ -0.64
SMARCB1-207ENST00000491967 NIP7Q9Y221 180 aaKnown RBP eCLIP11.06□□□□□ -0.64
SMARCB1-207ENST00000491967 MAPK8IP3Q9UPT6 1336 aa11.06□□□□□ -0.64
SMARCB1-207ENST00000491967 IBTKQ9P2D0 1353 aaPredicted RBP11.05□□□□□ -0.64
SMARCB1-207ENST00000491967 POTECB2RU33 542 aa11.05□□□□□ -0.64
SMARCB1-207ENST00000491967 C21orf2O43822 256 aa11.05□□□□□ -0.64
SMARCB1-207ENST00000491967 APLP1P51693 650 aa11.05□□□□□ -0.64
SMARCB1-207ENST00000491967 RIPK4P57078 832 aa11.05□□□□□ -0.64
SMARCB1-207ENST00000491967 FSTL1Q12841 308 aa11.05□□□□□ -0.64
SMARCB1-207ENST00000491967 CRY2Q49AN0 593 aa11.05□□□□□ -0.64
SMARCB1-207ENST00000491967 RIC1Q4ADV7 1423 aa11.05□□□□□ -0.64
SMARCB1-207ENST00000491967 PRPF40BQ6NWY9 871 aaKnown RBP11.05□□□□□ -0.64
SMARCB1-207ENST00000491967 TIAM2Q8IVF5 1701 aa11.05□□□□□ -0.64
SMARCB1-207ENST00000491967 WDR90Q96KV7 1748 aa11.05□□□□□ -0.64
SMARCB1-207ENST00000491967 RRAGCQ9HB90 399 aa11.05□□□□□ -0.64
SMARCB1-207ENST00000491967 MAP3K15Q6ZN16 1313 aa11.05□□□□□ -0.64
SMARCB1-207ENST00000491967 CACNA1SQ13698 1873 aa11.04□□□□□ -0.64
SMARCB1-207ENST00000491967 SNED1Q8TER0 1413 aa11.04□□□□□ -0.64
SMARCB1-207ENST00000491967 CHL1O00533 1208 aa11.04□□□□□ -0.64
SMARCB1-207ENST00000491967 NPR1P16066 1061 aa11.04□□□□□ -0.64
SMARCB1-207ENST00000491967 SOGA3Q5TF21 947 aa11.04□□□□□ -0.64
SMARCB1-207ENST00000491967 TTLL7Q6ZT98 887 aa11.04□□□□□ -0.64
SMARCB1-207ENST00000491967 ZNF34Q8IZ26 560 aa11.04□□□□□ -0.64
SMARCB1-207ENST00000491967 TRIM35Q9UPQ4 493 aa11.04□□□□□ -0.64
SMARCB1-207ENST00000491967 VEGFAP15692 232 aaPredicted RBP11.03□□□□□ -0.64
SMARCB1-207ENST00000491967 HOXA10P31260 410 aaPredicted RBP11.03□□□□□ -0.64
SMARCB1-207ENST00000491967 LMOD3Q0VAK6 560 aa11.03□□□□□ -0.64
SMARCB1-207ENST00000491967 RUNDC1Q96C34 613 aa11.03□□□□□ -0.64
SMARCB1-207ENST00000491967 TAOK3Q9H2K8 898 aa11.03□□□□□ -0.64
SMARCB1-207ENST00000491967 GIGYF2Q6Y7W6 1299 aaKnown RBP11.02□□□□□ -0.65
SMARCB1-207ENST00000491967 NYXQ9GZU5 481 aa11.02□□□□□ -0.65
SMARCB1-207ENST00000491967 PRKRIP1Q9H875 184 aaPredicted RBP11.02□□□□□ -0.65
SMARCB1-207ENST00000491967 TSPYL4Q9UJ04 414 aa11.02□□□□□ -0.65
SMARCB1-207ENST00000491967 ADAMTS8Q9UP79 889 aa11.02□□□□□ -0.65
SMARCB1-207ENST00000491967 RRP7AQ9Y3A4 280 aaKnown RBP11.02□□□□□ -0.65
SMARCB1-207ENST00000491967 UBN2Q6ZU65 1347 aa11.02□□□□□ -0.65
SMARCB1-207ENST00000491967 ALDH1B1P30837 517 aa11.01□□□□□ -0.65
SMARCB1-207ENST00000491967 ERFEQ4G0M1 354 aa11.01□□□□□ -0.65
SMARCB1-207ENST00000491967 SLC10A5Q5PT55 438 aa11.01□□□□□ -0.65
SMARCB1-207ENST00000491967 ABCC12Q96J65 1359 aa11.01□□□□□ -0.65
SMARCB1-207ENST00000491967 NPHP1O15259 732 aa11□□□□□ -0.65
SMARCB1-207ENST00000491967 PROSER3Q2NL68 480 aa11□□□□□ -0.65
SMARCB1-207ENST00000491967 CCDC93Q567U6 631 aa11□□□□□ -0.65
SMARCB1-207ENST00000491967 SUSD4Q5VX71 490 aa11□□□□□ -0.65
SMARCB1-207ENST00000491967 DPY19L2Q6NUT2 758 aa11□□□□□ -0.65
SMARCB1-207ENST00000491967 KIF6Q6ZMV9 814 aa11□□□□□ -0.65
SMARCB1-207ENST00000491967 RTKN2Q8IZC4 609 aa11□□□□□ -0.65
SMARCB1-207ENST00000491967 SMC1BQ8NDV3 1235 aa11□□□□□ -0.65
SMARCB1-207ENST00000491967 L3MBTL3Q96JM7 780 aaPredicted RBP11□□□□□ -0.65
SMARCB1-207ENST00000491967 NTSR2O95665 410 aa10.99□□□□□ -0.65
SMARCB1-207ENST00000491967 ZNF853P0CG23 659 aa10.99□□□□□ -0.65
SMARCB1-207ENST00000491967 MYL6BP14649 208 aa10.99□□□□□ -0.65
SMARCB1-207ENST00000491967 FKBP4Q02790 459 aaKnown RBP eCLIP10.99□□□□□ -0.65
SMARCB1-207ENST00000491967 PARP10Q53GL7 1025 aa10.99□□□□□ -0.65
SMARCB1-207ENST00000491967 CC2D2BQ6DHV5 1058 aa10.99□□□□□ -0.65
SMARCB1-207ENST00000491967 C16orf71Q8IYS4 520 aaPredicted RBP10.99□□□□□ -0.65
SMARCB1-207ENST00000491967 NGEFQ8N5V2 710 aa10.99□□□□□ -0.65
SMARCB1-207ENST00000491967 CRAMP1Q96RY5 1269 aa10.99□□□□□ -0.65
SMARCB1-207ENST00000491967 PSMD1Q99460 953 aa10.99□□□□□ -0.65
SMARCB1-207ENST00000491967 ZBTB3Q9H5J0 574 aa10.99□□□□□ -0.65
SMARCB1-207ENST00000491967 SCN4AP35499 1836 aa10.99□□□□□ -0.65
SMARCB1-207ENST00000491967 ANKRD36CQ5JPF3 1778 aa10.98□□□□□ -0.65
SMARCB1-207ENST00000491967 HOXB7P09629 217 aa10.98□□□□□ -0.65
SMARCB1-207ENST00000491967 GRIPAP1Q4V328 841 aa10.98□□□□□ -0.65
SMARCB1-207ENST00000491967 OLFM4Q6UX06 510 aa10.98□□□□□ -0.65
SMARCB1-207ENST00000491967 NUTM1Q86Y26 1132 aa10.98□□□□□ -0.65
SMARCB1-207ENST00000491967 CCDC146Q8IYE0 955 aa10.98□□□□□ -0.65
SMARCB1-207ENST00000491967 JMYQ8N9B5 988 aa10.98□□□□□ -0.65
SMARCB1-207ENST00000491967 CFAP44Q96MT7 982 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms