RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 CNBD1Q8NA66 436 aa18.95■□□□□ 0.62
ATG4B-222ENST00000491867 TBC1D2BQ9UPU7 963 aa18.95■□□□□ 0.62
ATG4B-222ENST00000491867 TNRC18O15417 2968 aaPredicted RBP18.95■□□□□ 0.62
ATG4B-222ENST00000491867 MASTLQ96GX5 879 aa18.94■□□□□ 0.62
ATG4B-222ENST00000491867 ZNF330Q9Y3S2 320 aaPredicted RBP18.94■□□□□ 0.62
ATG4B-222ENST00000491867 MRC1P22897 1456 aa18.94■□□□□ 0.62
ATG4B-222ENST00000491867 IL13P35225 146 aa18.93■□□□□ 0.62
ATG4B-222ENST00000491867 PNMA8AQ86V59 439 aaPredicted RBP18.93■□□□□ 0.62
ATG4B-222ENST00000491867 C7orf43Q8WVR3 580 aa18.93■□□□□ 0.62
ATG4B-222ENST00000491867 SETDB2Q96T68 719 aa18.93■□□□□ 0.62
ATG4B-222ENST00000491867 ZNF277Q9NRM2 450 aaPredicted RBP18.93■□□□□ 0.62
ATG4B-222ENST00000491867 CCDC93Q567U6 631 aa18.92■□□□□ 0.62
ATG4B-222ENST00000491867 BEGAINQ9BUH8 593 aa18.92■□□□□ 0.62
ATG4B-222ENST00000491867 CACNA1SQ13698 1873 aa18.91■□□□□ 0.62
ATG4B-222ENST00000491867 ST5P78524 1137 aa18.91■□□□□ 0.62
ATG4B-222ENST00000491867 CAPNS2Q96L46 248 aa18.91■□□□□ 0.62
ATG4B-222ENST00000491867 RNF123Q5XPI4 1314 aa18.91■□□□□ 0.62
ATG4B-222ENST00000491867 ADAMTSL1Q8N6G6 1762 aa18.91■□□□□ 0.62
ATG4B-222ENST00000491867 FKBP4Q02790 459 aaKnown RBP eCLIP18.9■□□□□ 0.62
ATG4B-222ENST00000491867 PAXIP1Q6ZW49 1069 aaPredicted RBP18.9■□□□□ 0.62
ATG4B-222ENST00000491867 MORC1Q86VD1 984 aa18.9■□□□□ 0.62
ATG4B-222ENST00000491867 GRM1Q13255 1194 aa18.89■□□□□ 0.61
ATG4B-222ENST00000491867 TTC5Q8N0Z6 440 aa18.89■□□□□ 0.61
ATG4B-222ENST00000491867 CFAP44Q96MT7 982 aa18.89■□□□□ 0.61
ATG4B-222ENST00000491867 DDX21Q9NR30 783 aaKnown RBP eCLIP18.89■□□□□ 0.61
ATG4B-222ENST00000491867 OLFM4Q6UX06 510 aa18.88■□□□□ 0.61
ATG4B-222ENST00000491867 GPR101Q96P66 508 aaPredicted RBP18.88■□□□□ 0.61
ATG4B-222ENST00000491867 PANK3Q9H999 370 aa18.88■□□□□ 0.61
ATG4B-222ENST00000491867 TSKSQ9UJT2 592 aa18.88■□□□□ 0.61
ATG4B-222ENST00000491867 SCN7AQ01118 1682 aa18.88■□□□□ 0.61
ATG4B-222ENST00000491867 CAMTA2O94983 1202 aa18.87■□□□□ 0.61
ATG4B-222ENST00000491867 IL6STP40189 918 aaPredicted RBP18.87■□□□□ 0.61
ATG4B-222ENST00000491867 ECE1P42892 770 aa18.87■□□□□ 0.61
ATG4B-222ENST00000491867 CYP4F22Q6NT55 531 aa18.87■□□□□ 0.61
ATG4B-222ENST00000491867 ZNF496Q96IT1 587 aaPredicted RBP18.87■□□□□ 0.61
ATG4B-222ENST00000491867 ARFGEF2Q9Y6D5 1785 aa18.86■□□□□ 0.61
ATG4B-222ENST00000491867 FZD9O00144 591 aa18.86■□□□□ 0.61
ATG4B-222ENST00000491867 HMOX1P09601 288 aa18.86■□□□□ 0.61
ATG4B-222ENST00000491867 FMR1Q06787 632 aaKnown RBP eCLIP18.86■□□□□ 0.61
ATG4B-222ENST00000491867 TRIM26Q12899 539 aaPredicted RBP18.86■□□□□ 0.61
ATG4B-222ENST00000491867 MTHFSDQ2M296 383 aaKnown RBP18.86■□□□□ 0.61
ATG4B-222ENST00000491867 UBR2Q8IWV8 1755 aa18.86■□□□□ 0.61
ATG4B-222ENST00000491867 A1BGP04217 495 aa18.85■□□□□ 0.61
ATG4B-222ENST00000491867 NPR1P16066 1061 aa18.85■□□□□ 0.61
ATG4B-222ENST00000491867 NPM2Q86SE8 214 aaKnown RBP18.85■□□□□ 0.61
ATG4B-222ENST00000491867 NBPF5PQ86XG9 351 aaPredicted RBP18.85■□□□□ 0.61
ATG4B-222ENST00000491867 RTKN2Q8IZC4 609 aa18.85■□□□□ 0.61
ATG4B-222ENST00000491867 GPC2Q8N158 579 aa18.85■□□□□ 0.61
ATG4B-222ENST00000491867 TEX13AQ9BXU3 409 aaPredicted RBP18.85■□□□□ 0.61
ATG4B-222ENST00000491867 HEG1Q9ULI3 1381 aa18.84■□□□□ 0.61
ATG4B-222ENST00000491867 IARSP41252 1262 aaKnown RBP18.84■□□□□ 0.61
ATG4B-222ENST00000491867 MCOLN1Q9GZU1 580 aa18.84■□□□□ 0.61
ATG4B-222ENST00000491867 THSD7BQ9C0I4 1608 aa18.83■□□□□ 0.61
ATG4B-222ENST00000491867 SYNE4Q8N205 404 aa18.83■□□□□ 0.6
ATG4B-222ENST00000491867 AOC2O75106 756 aa18.82■□□□□ 0.6
ATG4B-222ENST00000491867 CST9Q5W186 159 aa18.82■□□□□ 0.6
ATG4B-222ENST00000491867 ZNF790Q6PG37 636 aa18.82■□□□□ 0.6
ATG4B-222ENST00000491867 DZIP3Q86Y13 1208 aaKnown RBP18.82■□□□□ 0.6
ATG4B-222ENST00000491867 GJA3Q9Y6H8 435 aa18.82■□□□□ 0.6
ATG4B-222ENST00000491867 CASP8AP2Q9UKL3 1982 aa18.82■□□□□ 0.6
ATG4B-222ENST00000491867 TRAF5O00463 557 aa18.81■□□□□ 0.6
ATG4B-222ENST00000491867 KLRG2A4D1S0 409 aaPredicted RBP18.8■□□□□ 0.6
ATG4B-222ENST00000491867 LMOD1P29536 600 aaPredicted RBP18.8■□□□□ 0.6
ATG4B-222ENST00000491867 MAP2K2P36507 400 aa18.8■□□□□ 0.6
ATG4B-222ENST00000491867 JDP2Q8WYK2 163 aa18.8■□□□□ 0.6
ATG4B-222ENST00000491867 EPS15P42566 896 aa18.79■□□□□ 0.6
ATG4B-222ENST00000491867 TEFQ10587 303 aa18.79■□□□□ 0.6
ATG4B-222ENST00000491867 TLL2Q9Y6L7 1015 aa18.79■□□□□ 0.6
ATG4B-222ENST00000491867 CA12O43570 354 aa18.78■□□□□ 0.6
ATG4B-222ENST00000491867 EIF6P56537 245 aaKnown RBP18.78■□□□□ 0.6
ATG4B-222ENST00000491867 FMNL2Q96PY5 1086 aa18.78■□□□□ 0.6
ATG4B-222ENST00000491867 PIP4K2AP48426 406 aaPredicted RBP18.77■□□□□ 0.6
ATG4B-222ENST00000491867 DGKZQ13574 1117 aa18.77■□□□□ 0.6
ATG4B-222ENST00000491867 CLEC4GQ6UXB4 293 aa18.77■□□□□ 0.6
ATG4B-222ENST00000491867 IL17REQ8NFR9 667 aa18.77■□□□□ 0.6
ATG4B-222ENST00000491867 LTBP1Q14766 1721 aa18.77■□□□□ 0.59
ATG4B-222ENST00000491867 SCNN1DP51172 638 aa18.76■□□□□ 0.59
ATG4B-222ENST00000491867 TPTE2Q6XPS3 522 aa18.76■□□□□ 0.59
ATG4B-222ENST00000491867 PSMD1Q99460 953 aa18.76■□□□□ 0.59
ATG4B-222ENST00000491867 TRPM7Q96QT4 1865 aa18.75■□□□□ 0.59
ATG4B-222ENST00000491867 FAM177BA6PVY3 158 aa18.75■□□□□ 0.59
ATG4B-222ENST00000491867 ALDH1B1P30837 517 aa18.75■□□□□ 0.59
ATG4B-222ENST00000491867 NIP7Q9Y221 180 aaKnown RBP eCLIP18.75■□□□□ 0.59
ATG4B-222ENST00000491867 ZNF652Q9Y2D9 606 aa18.75■□□□□ 0.59
ATG4B-222ENST00000491867 BCORQ6W2J9 1755 aa18.75■□□□□ 0.59
ATG4B-222ENST00000491867 COL4A5P29400 1685 aa18.74■□□□□ 0.59
ATG4B-222ENST00000491867 USP50Q70EL3 339 aaPredicted RBP18.74■□□□□ 0.59
ATG4B-222ENST00000491867 SAPCD2Q86UD0 394 aa18.74■□□□□ 0.59
ATG4B-222ENST00000491867 TIMELESSQ9UNS1 1208 aa18.74■□□□□ 0.59
ATG4B-222ENST00000491867 KNSTRNQ9Y448 316 aa18.74■□□□□ 0.59
ATG4B-222ENST00000491867 KCNQ3O43525 872 aa18.73■□□□□ 0.59
ATG4B-222ENST00000491867 BRPF1P55201 1214 aaPredicted RBP18.73■□□□□ 0.59
ATG4B-222ENST00000491867 USP16Q9Y5T5 823 aa18.73■□□□□ 0.59
ATG4B-222ENST00000491867 SNED1Q8TER0 1413 aa18.73■□□□□ 0.59
ATG4B-222ENST00000491867 GNAT3A8MTJ3 354 aa18.72■□□□□ 0.59
ATG4B-222ENST00000491867 CELF2O95319 508 aaKnown RBP18.72■□□□□ 0.59
ATG4B-222ENST00000491867 LARGE2Q8N3Y3 721 aa18.72■□□□□ 0.59
ATG4B-222ENST00000491867 DIAPH1O60610 1272 aaKnown RBP18.71■□□□□ 0.59
ATG4B-222ENST00000491867 CIAPIN1Q6FI81 312 aa18.71■□□□□ 0.59
ATG4B-222ENST00000491867 GTF2E1P29083 439 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms