RNA–Protein interactions for RNA: ENST00000491770.1

UBE2D4-211, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-211ENST00000491770 LHX8Q68G74 356 aa6.84□□□□□ -1.31
UBE2D4-211ENST00000491770 EYA1Q99502 592 aa6.84□□□□□ -1.31
UBE2D4-211ENST00000491770 CARD14Q9BXL6 1004 aa6.84□□□□□ -1.31
UBE2D4-211ENST00000491770 UBR3Q6ZT12 1888 aa6.83□□□□□ -1.32
UBE2D4-211ENST00000491770 PNPLA7Q6ZV29 1317 aa6.83□□□□□ -1.32
UBE2D4-211ENST00000491770 IGSF1Q8N6C5 1336 aa6.83□□□□□ -1.32
UBE2D4-211ENST00000491770 SCN11AQ9UI33 1791 aa6.83□□□□□ -1.32
UBE2D4-211ENST00000491770 ATP6V1AP38606 617 aa6.83□□□□□ -1.32
UBE2D4-211ENST00000491770 MTHFSP49914 203 aa6.83□□□□□ -1.32
UBE2D4-211ENST00000491770 KCNQ4P56696 695 aa6.83□□□□□ -1.32
UBE2D4-211ENST00000491770 HIC1Q14526 733 aa6.83□□□□□ -1.32
UBE2D4-211ENST00000491770 TSR1Q2NL82 804 aaKnown RBP6.83□□□□□ -1.32
UBE2D4-211ENST00000491770 SULT6B1Q6IMI4 303 aa6.83□□□□□ -1.32
UBE2D4-211ENST00000491770 TTC5Q8N0Z6 440 aa6.83□□□□□ -1.32
UBE2D4-211ENST00000491770 ZNF710Q8N1W2 664 aa6.83□□□□□ -1.32
UBE2D4-211ENST00000491770 KRI1Q8N9T8 703 aaKnown RBP6.83□□□□□ -1.32
UBE2D4-211ENST00000491770 POLKQ9UBT6 870 aa6.83□□□□□ -1.32
UBE2D4-211ENST00000491770 NUDCQ9Y266 331 aa6.83□□□□□ -1.32
UBE2D4-211ENST00000491770 LOC102724428A0A0B4J2F2 783 aa6.82□□□□□ -1.32
UBE2D4-211ENST00000491770 TRIM66O15016 1216 aa6.82□□□□□ -1.32
UBE2D4-211ENST00000491770 MAP3K7O43318 606 aa6.82□□□□□ -1.32
UBE2D4-211ENST00000491770 DIAPH1O60610 1272 aaKnown RBP6.82□□□□□ -1.32
UBE2D4-211ENST00000491770 HOXB1P14653 301 aaPredicted RBP6.82□□□□□ -1.32
UBE2D4-211ENST00000491770 PHKG2P15735 406 aa6.82□□□□□ -1.32
UBE2D4-211ENST00000491770 SIK1P57059 783 aa6.82□□□□□ -1.32
UBE2D4-211ENST00000491770 TEFQ10587 303 aa6.82□□□□□ -1.32
UBE2D4-211ENST00000491770 ZNF454Q8N9F8 522 aa6.82□□□□□ -1.32
UBE2D4-211ENST00000491770 FBXW7Q969H0 707 aa6.82□□□□□ -1.32
UBE2D4-211ENST00000491770 DCAF5Q96JK2 942 aa6.82□□□□□ -1.32
UBE2D4-211ENST00000491770 LHX6Q9UPM6 363 aa6.82□□□□□ -1.32
UBE2D4-211ENST00000491770 RTCBQ9Y3I0 505 aaKnown RBP6.82□□□□□ -1.32
UBE2D4-211ENST00000491770 NCAPD2Q15021 1401 aa6.82□□□□□ -1.32
UBE2D4-211ENST00000491770 IRF6O14896 467 aa6.81□□□□□ -1.32
UBE2D4-211ENST00000491770 SNPHO15079 494 aa6.81□□□□□ -1.32
UBE2D4-211ENST00000491770 CYP27B1O15528 508 aa6.81□□□□□ -1.32
UBE2D4-211ENST00000491770 HMOX1P09601 288 aa6.81□□□□□ -1.32
UBE2D4-211ENST00000491770 SSFA2P28290 1259 aa6.81□□□□□ -1.32
UBE2D4-211ENST00000491770 MAP2K5Q13163 448 aa6.81□□□□□ -1.32
UBE2D4-211ENST00000491770 ZDHHC16Q969W1 377 aa6.81□□□□□ -1.32
UBE2D4-211ENST00000491770 ADAM33Q9BZ11 813 aa6.81□□□□□ -1.32
UBE2D4-211ENST00000491770 LRRC4BQ9NT99 713 aa6.81□□□□□ -1.32
UBE2D4-211ENST00000491770 ZNF330Q9Y3S2 320 aaPredicted RBP6.81□□□□□ -1.32
UBE2D4-211ENST00000491770 C4AP0C0L4 1744 aa6.81□□□□□ -1.32
UBE2D4-211ENST00000491770 COL5A3P25940 1745 aaPredicted RBP6.81□□□□□ -1.32
UBE2D4-211ENST00000491770 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.8□□□□□ -1.32
UBE2D4-211ENST00000491770 PTCD1O75127 700 aaKnown RBP6.8□□□□□ -1.32
UBE2D4-211ENST00000491770 RFC4P35249 363 aa6.8□□□□□ -1.32
UBE2D4-211ENST00000491770 C6orf132Q5T0Z8 1188 aa6.8□□□□□ -1.32
UBE2D4-211ENST00000491770 GAS2L2Q8NHY3 880 aa6.8□□□□□ -1.32
UBE2D4-211ENST00000491770 PIGBQ92521 554 aa6.8□□□□□ -1.32
UBE2D4-211ENST00000491770 RTF1Q92541 710 aaKnown RBP6.8□□□□□ -1.32
UBE2D4-211ENST00000491770 SYT17Q9BSW7 474 aa6.8□□□□□ -1.32
UBE2D4-211ENST00000491770 PDGFDQ9GZP0 370 aaPredicted RBP6.8□□□□□ -1.32
UBE2D4-211ENST00000491770 MAP3K5Q99683 1374 aa6.8□□□□□ -1.32
UBE2D4-211ENST00000491770 CICQ96RK0 1608 aaPredicted RBP6.79□□□□□ -1.32
UBE2D4-211ENST00000491770 MAPK8IP3Q9UPT6 1336 aa6.79□□□□□ -1.32
UBE2D4-211ENST00000491770 ERVV-2B6SEH9 535 aa6.79□□□□□ -1.32
UBE2D4-211ENST00000491770 GRIN3BO60391 1043 aa6.79□□□□□ -1.32
UBE2D4-211ENST00000491770 AEBP1Q8IUX7 1158 aa6.79□□□□□ -1.32
UBE2D4-211ENST00000491770 CCDC102AQ96A19 550 aa6.79□□□□□ -1.32
UBE2D4-211ENST00000491770 CCDC87Q9NVE4 849 aa6.79□□□□□ -1.32
UBE2D4-211ENST00000491770 PARP3Q9Y6F1 533 aa6.79□□□□□ -1.32
UBE2D4-211ENST00000491770 ZNF831Q5JPB2 1677 aa6.78□□□□□ -1.32
UBE2D4-211ENST00000491770 ZPR1O75312 459 aa6.78□□□□□ -1.32
UBE2D4-211ENST00000491770 PDE4DQ08499 809 aa6.78□□□□□ -1.32
UBE2D4-211ENST00000491770 NEUROD2Q15784 382 aa6.78□□□□□ -1.32
UBE2D4-211ENST00000491770 AKAP4Q5JQC9 854 aa6.78□□□□□ -1.32
UBE2D4-211ENST00000491770 TRAPPC3LQ5T215 181 aa6.78□□□□□ -1.32
UBE2D4-211ENST00000491770 COL23A1Q86Y22 540 aaPredicted RBP6.78□□□□□ -1.32
UBE2D4-211ENST00000491770 WWC3Q9ULE0 1092 aa6.78□□□□□ -1.32
UBE2D4-211ENST00000491770 TJP1Q07157 1748 aa6.78□□□□□ -1.32
UBE2D4-211ENST00000491770 KDM6AO15550 1401 aaPredicted RBP6.77□□□□□ -1.33
UBE2D4-211ENST00000491770 COL24A1Q17RW2 1714 aa6.77□□□□□ -1.33
UBE2D4-211ENST00000491770 GIGYF1O75420 1035 aaPredicted RBP6.77□□□□□ -1.33
UBE2D4-211ENST00000491770 U2AF1L5P0DN76 240 aaPredicted RBP6.77□□□□□ -1.33
UBE2D4-211ENST00000491770 U2AF1Q01081 240 aaKnown RBP eCLIP6.77□□□□□ -1.33
UBE2D4-211ENST00000491770 ASAP1Q9ULH1 1129 aa6.77□□□□□ -1.33
UBE2D4-211ENST00000491770 KDRP35968 1356 aa6.77□□□□□ -1.33
UBE2D4-211ENST00000491770 CNTNAP4Q9C0A0 1308 aa6.76□□□□□ -1.33
UBE2D4-211ENST00000491770 MMP10P09238 476 aa6.76□□□□□ -1.33
UBE2D4-211ENST00000491770 TMEM132AQ24JP5 1023 aa6.76□□□□□ -1.33
UBE2D4-211ENST00000491770 NLGN1Q8N2Q7 840 aa6.76□□□□□ -1.33
UBE2D4-211ENST00000491770 TTC13Q8NBP0 860 aa6.76□□□□□ -1.33
UBE2D4-211ENST00000491770 LINC00116Q8NCU8 138 aa6.76□□□□□ -1.33
UBE2D4-211ENST00000491770 GPBP1L1Q9HC44 474 aaPredicted RBP6.76□□□□□ -1.33
UBE2D4-211ENST00000491770 NPC1L1Q9UHC9 1359 aa6.76□□□□□ -1.33
UBE2D4-211ENST00000491770 MRC1P22897 1456 aa6.76□□□□□ -1.33
UBE2D4-211ENST00000491770 LAMB4A4D0S4 1761 aa6.75□□□□□ -1.33
UBE2D4-211ENST00000491770 N4BP2Q86UW6 1770 aaPredicted RBP6.75□□□□□ -1.33
UBE2D4-211ENST00000491770 SCN7AQ01118 1682 aa6.75□□□□□ -1.33
UBE2D4-211ENST00000491770 COL15A1P39059 1388 aa6.75□□□□□ -1.33
UBE2D4-211ENST00000491770 GNAT3A8MTJ3 354 aa6.75□□□□□ -1.33
UBE2D4-211ENST00000491770 STARD3NLO95772 234 aa6.75□□□□□ -1.33
UBE2D4-211ENST00000491770 PRKAR2BP31323 418 aa6.75□□□□□ -1.33
UBE2D4-211ENST00000491770 IL13P35225 146 aa6.75□□□□□ -1.33
UBE2D4-211ENST00000491770 CRKLP46109 303 aaKnown RBP6.75□□□□□ -1.33
UBE2D4-211ENST00000491770 AMHR2Q16671 573 aa6.75□□□□□ -1.33
UBE2D4-211ENST00000491770 PPP4R3BQ5MIZ7 849 aa6.75□□□□□ -1.33
UBE2D4-211ENST00000491770 NFATC2IPQ8NCF5 419 aa6.75□□□□□ -1.33
UBE2D4-211ENST00000491770 NLGN2Q8NFZ4 835 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms