RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 MKRN1Q9UHC7 482 aaKnown RBP17.9■□□□□ 0.46
USF1-206ENST00000491629 PRAMEF22A3QJZ6 481 aa17.89■□□□□ 0.45
USF1-206ENST00000491629 TEFQ10587 303 aa17.89■□□□□ 0.45
USF1-206ENST00000491629 STYK1Q6J9G0 422 aa17.89■□□□□ 0.45
USF1-206ENST00000491629 CNBD1Q8NA66 436 aa17.89■□□□□ 0.45
USF1-206ENST00000491629 SETDB2Q96T68 719 aa17.89■□□□□ 0.45
USF1-206ENST00000491629 TEX13AQ9BXU3 409 aaPredicted RBP17.89■□□□□ 0.45
USF1-206ENST00000491629 USP16Q9Y5T5 823 aa17.89■□□□□ 0.45
USF1-206ENST00000491629 PASKQ96RG2 1323 aa17.89■□□□□ 0.45
USF1-206ENST00000491629 CNKSR1Q969H4 720 aa17.88■□□□□ 0.45
USF1-206ENST00000491629 PHACTR3Q96KR7 559 aa17.88■□□□□ 0.45
USF1-206ENST00000491629 FMNL2Q96PY5 1086 aa17.88■□□□□ 0.45
USF1-206ENST00000491629 OLFM4Q6UX06 510 aa17.87■□□□□ 0.45
USF1-206ENST00000491629 MASTLQ96GX5 879 aa17.87■□□□□ 0.45
USF1-206ENST00000491629 CNTNAP1P78357 1384 aa17.87■□□□□ 0.45
USF1-206ENST00000491629 NUP98P52948 1817 aa17.86■□□□□ 0.45
USF1-206ENST00000491629 U2SURPO15042 1029 aaKnown RBP17.86■□□□□ 0.45
USF1-206ENST00000491629 FOXN1O15353 648 aa17.86■□□□□ 0.45
USF1-206ENST00000491629 DZIP3Q86Y13 1208 aaKnown RBP17.86■□□□□ 0.45
USF1-206ENST00000491629 GAS2L2Q8NHY3 880 aa17.86■□□□□ 0.45
USF1-206ENST00000491629 L3MBTL3Q96JM7 780 aaPredicted RBP17.86■□□□□ 0.45
USF1-206ENST00000491629 KLRG2A4D1S0 409 aaPredicted RBP17.85■□□□□ 0.45
USF1-206ENST00000491629 ITGBL1O95965 494 aaPredicted RBP17.85■□□□□ 0.45
USF1-206ENST00000491629 ZNF541Q9H0D2 1346 aa17.85■□□□□ 0.45
USF1-206ENST00000491629 TAF1DQ9H5J8 278 aaPredicted RBP17.85■□□□□ 0.45
USF1-206ENST00000491629 ST5P78524 1137 aa17.84■□□□□ 0.45
USF1-206ENST00000491629 DLG5Q8TDM6 1919 aa17.84■□□□□ 0.45
USF1-206ENST00000491629 LTBP1Q14766 1721 aa17.84■□□□□ 0.45
USF1-206ENST00000491629 SNED1Q8TER0 1413 aa17.83■□□□□ 0.45
USF1-206ENST00000491629 NPC1L1Q9UHC9 1359 aa17.83■□□□□ 0.45
USF1-206ENST00000491629 BTBD11A6QL63 1104 aa17.83■□□□□ 0.44
USF1-206ENST00000491629 LAMB4A4D0S4 1761 aa17.83■□□□□ 0.44
USF1-206ENST00000491629 COL4A5P29400 1685 aa17.83■□□□□ 0.44
USF1-206ENST00000491629 NBPF26B4DH59 902 aa17.82■□□□□ 0.44
USF1-206ENST00000491629 VEGFBP49765 207 aa17.82■□□□□ 0.44
USF1-206ENST00000491629 CNGB1Q14028 1251 aaPredicted RBP17.82■□□□□ 0.44
USF1-206ENST00000491629 NBPF10Q6P3W6 841 aaKnown RBP17.82■□□□□ 0.44
USF1-206ENST00000491629 LDHDQ86WU2 507 aa17.82■□□□□ 0.44
USF1-206ENST00000491629 NBPF15Q8N660 670 aa17.82■□□□□ 0.44
USF1-206ENST00000491629 RSPH6AQ9H0K4 717 aa17.82■□□□□ 0.44
USF1-206ENST00000491629 ZNF277Q9NRM2 450 aaPredicted RBP17.82■□□□□ 0.44
USF1-206ENST00000491629 PRKAR2BP31323 418 aa17.81■□□□□ 0.44
USF1-206ENST00000491629 SOGA3Q5TF21 947 aa17.81■□□□□ 0.44
USF1-206ENST00000491629 CLEC4GQ6UXB4 293 aa17.81■□□□□ 0.44
USF1-206ENST00000491629 NBPF5PQ86XG9 351 aaPredicted RBP17.81■□□□□ 0.44
USF1-206ENST00000491629 IQCA1LA6NCM1 817 aa17.8■□□□□ 0.44
USF1-206ENST00000491629 NPHP1O15259 732 aa17.8■□□□□ 0.44
USF1-206ENST00000491629 NPR1P16066 1061 aa17.8■□□□□ 0.44
USF1-206ENST00000491629 FKBP4Q02790 459 aaKnown RBP eCLIP17.8■□□□□ 0.44
USF1-206ENST00000491629 CCDC93Q567U6 631 aa17.8■□□□□ 0.44
USF1-206ENST00000491629 TRPM7Q96QT4 1865 aa17.79■□□□□ 0.44
USF1-206ENST00000491629 KDM3BQ7LBC6 1761 aa17.79■□□□□ 0.44
USF1-206ENST00000491629 HLFQ16534 295 aa17.78■□□□□ 0.44
USF1-206ENST00000491629 MCM10Q7L590 875 aa17.78■□□□□ 0.44
USF1-206ENST00000491629 PRDM10Q9NQV6 1147 aa17.78■□□□□ 0.44
USF1-206ENST00000491629 TMEM88BA6NKF7 163 aa17.77■□□□□ 0.44
USF1-206ENST00000491629 FZD9O00144 591 aa17.77■□□□□ 0.44
USF1-206ENST00000491629 SNRPA1P09661 255 aaKnown RBP17.77■□□□□ 0.44
USF1-206ENST00000491629 EAPPQ56P03 285 aaPredicted RBP17.77■□□□□ 0.44
USF1-206ENST00000491629 NPM2Q86SE8 214 aaKnown RBP17.77■□□□□ 0.44
USF1-206ENST00000491629 SLC51AQ86UW1 340 aa17.77■□□□□ 0.44
USF1-206ENST00000491629 WBP1LQ9NX94 342 aa17.77■□□□□ 0.44
USF1-206ENST00000491629 NIP7Q9Y221 180 aaKnown RBP eCLIP17.77■□□□□ 0.44
USF1-206ENST00000491629 RNF123Q5XPI4 1314 aa17.76■□□□□ 0.43
USF1-206ENST00000491629 FAM177BA6PVY3 158 aa17.76■□□□□ 0.43
USF1-206ENST00000491629 EPHX2P34913 555 aa17.76■□□□□ 0.43
USF1-206ENST00000491629 DCTN1Q14203 1278 aa17.76■□□□□ 0.43
USF1-206ENST00000491629 HACL1Q9UJ83 578 aa17.76■□□□□ 0.43
USF1-206ENST00000491629 THSD7BQ9C0I4 1608 aa17.76■□□□□ 0.43
USF1-206ENST00000491629 MAP1SQ66K74 1059 aaPredicted RBP17.75■□□□□ 0.43
USF1-206ENST00000491629 TPTE2Q6XPS3 522 aa17.75■□□□□ 0.43
USF1-206ENST00000491629 SYNE4Q8N205 404 aa17.75■□□□□ 0.43
USF1-206ENST00000491629 CCER1Q8TC90 406 aaPredicted RBP17.75■□□□□ 0.43
USF1-206ENST00000491629 ABCC12Q96J65 1359 aa17.75■□□□□ 0.43
USF1-206ENST00000491629 RASSF10A6NK89 507 aa17.74■□□□□ 0.43
USF1-206ENST00000491629 IARSP41252 1262 aaKnown RBP17.74■□□□□ 0.43
USF1-206ENST00000491629 CTCFP49711 727 aaPredicted RBP17.74■□□□□ 0.43
USF1-206ENST00000491629 RTKN2Q8IZC4 609 aa17.74■□□□□ 0.43
USF1-206ENST00000491629 ZNF652Q9Y2D9 606 aa17.74■□□□□ 0.43
USF1-206ENST00000491629 RGL2O15211 777 aa17.73■□□□□ 0.43
USF1-206ENST00000491629 LBX1P52954 281 aa17.73■□□□□ 0.43
USF1-206ENST00000491629 FMR1Q06787 632 aaKnown RBP eCLIP17.73■□□□□ 0.43
USF1-206ENST00000491629 CNTROBQ8N137 903 aa17.73■□□□□ 0.43
USF1-206ENST00000491629 CLEC11AQ9Y240 323 aa17.73■□□□□ 0.43
USF1-206ENST00000491629 CRY2Q49AN0 593 aa17.72■□□□□ 0.43
USF1-206ENST00000491629 MIS18AQ9NYP9 233 aa17.72■□□□□ 0.43
USF1-206ENST00000491629 HSPA8P11142 646 aaKnown RBP17.71■□□□□ 0.43
USF1-206ENST00000491629 NUTM1Q86Y26 1132 aa17.71■□□□□ 0.43
USF1-206ENST00000491629 GPC2Q8N158 579 aa17.71■□□□□ 0.43
USF1-206ENST00000491629 PSMD1Q99460 953 aa17.71■□□□□ 0.43
USF1-206ENST00000491629 LAMB2P55268 1798 aa17.71■□□□□ 0.43
USF1-206ENST00000491629 ALDH1B1P30837 517 aa17.7■□□□□ 0.42
USF1-206ENST00000491629 DEFB115Q30KQ5 88 aa17.7■□□□□ 0.42
USF1-206ENST00000491629 PNMA8AQ86V59 439 aaPredicted RBP17.7■□□□□ 0.42
USF1-206ENST00000491629 AIDAQ96BJ3 306 aa17.69■□□□□ 0.42
USF1-206ENST00000491629 TAF1P21675 1872 aa17.69■□□□□ 0.42
USF1-206ENST00000491629 WDR33Q9C0J8 1336 aaKnown RBP17.69■□□□□ 0.42
USF1-206ENST00000491629 U2AF1L5P0DN76 240 aaPredicted RBP17.68■□□□□ 0.42
USF1-206ENST00000491629 SCNN1DP51172 638 aa17.68■□□□□ 0.42
USF1-206ENST00000491629 U2AF1Q01081 240 aaKnown RBP eCLIP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms