RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 H0YIN7 160 aa17.79■□□□□ 0.44
CDK9-204ENST00000491521 PRR5LQ6MZQ0 368 aa17.79■□□□□ 0.44
CDK9-204ENST00000491521 CNBD1Q8NA66 436 aa17.79■□□□□ 0.44
CDK9-204ENST00000491521 ZNF622Q969S3 477 aaKnown RBP eCLIP17.79■□□□□ 0.44
CDK9-204ENST00000491521 ANKRD31Q8N7Z5 1873 aa17.79■□□□□ 0.44
CDK9-204ENST00000491521 FAM177BA6PVY3 158 aa17.78■□□□□ 0.44
CDK9-204ENST00000491521 EIF4A1P60842 406 aaKnown RBP17.78■□□□□ 0.44
CDK9-204ENST00000491521 ZNF219Q9P2Y4 722 aaPredicted RBP17.78■□□□□ 0.44
CDK9-204ENST00000491521 TSPYL4Q9UJ04 414 aa17.78■□□□□ 0.44
CDK9-204ENST00000491521 DLEC1Q9Y238 1755 aa17.78■□□□□ 0.44
CDK9-204ENST00000491521 TMPOP42166 694 aaKnown RBP17.77■□□□□ 0.44
CDK9-204ENST00000491521 TTLL6Q8N841 843 aa17.77■□□□□ 0.44
CDK9-204ENST00000491521 RNF181Q9P0P0 153 aa17.77■□□□□ 0.44
CDK9-204ENST00000491521 ZNF652Q9Y2D9 606 aa17.77■□□□□ 0.44
CDK9-204ENST00000491521 MYL6BP14649 208 aa17.76■□□□□ 0.43
CDK9-204ENST00000491521 ST5P78524 1137 aa17.76■□□□□ 0.43
CDK9-204ENST00000491521 RASSF7Q02833 373 aa17.76■□□□□ 0.43
CDK9-204ENST00000491521 NBPF5PQ86XG9 351 aaPredicted RBP17.76■□□□□ 0.43
CDK9-204ENST00000491521 COL11A2P13942 1736 aaPredicted RBP17.75■□□□□ 0.43
CDK9-204ENST00000491521 CEP350Q5VT06 3117 aa17.75■□□□□ 0.43
CDK9-204ENST00000491521 PDE6BP35913 854 aa17.75■□□□□ 0.43
CDK9-204ENST00000491521 BRIP1Q9BX63 1249 aa17.75■□□□□ 0.43
CDK9-204ENST00000491521 NIP7Q9Y221 180 aaKnown RBP eCLIP17.75■□□□□ 0.43
CDK9-204ENST00000491521 LAS1LQ9Y4W2 734 aaKnown RBP17.75■□□□□ 0.43
CDK9-204ENST00000491521 CACNA1SQ13698 1873 aa17.74■□□□□ 0.43
CDK9-204ENST00000491521 LMOD3Q0VAK6 560 aa17.74■□□□□ 0.43
CDK9-204ENST00000491521 HLFQ16534 295 aa17.74■□□□□ 0.43
CDK9-204ENST00000491521 EIF2S2P20042 333 aaKnown RBP17.73■□□□□ 0.43
CDK9-204ENST00000491521 CLEC4GQ6UXB4 293 aa17.73■□□□□ 0.43
CDK9-204ENST00000491521 SBF1O95248 1867 aa17.73■□□□□ 0.43
CDK9-204ENST00000491521 KIF6Q6ZMV9 814 aa17.72■□□□□ 0.43
CDK9-204ENST00000491521 TTLL7Q6ZT98 887 aa17.72■□□□□ 0.43
CDK9-204ENST00000491521 NECTIN2Q92692 538 aa17.72■□□□□ 0.43
CDK9-204ENST00000491521 C21orf2O43822 256 aa17.71■□□□□ 0.43
CDK9-204ENST00000491521 ZBTB3Q9H5J0 574 aa17.71■□□□□ 0.43
CDK9-204ENST00000491521 NMRK2Q9NPI5 230 aa17.71■□□□□ 0.43
CDK9-204ENST00000491521 CCDC88AQ3V6T2 1871 aa17.7■□□□□ 0.42
CDK9-204ENST00000491521 GTF2E1P29083 439 aaPredicted RBP17.7■□□□□ 0.42
CDK9-204ENST00000491521 NUP98P52948 1817 aa17.7■□□□□ 0.42
CDK9-204ENST00000491521 KIF3CO14782 793 aa17.69■□□□□ 0.42
CDK9-204ENST00000491521 GPTP24298 496 aa17.69■□□□□ 0.42
CDK9-204ENST00000491521 TPTE2Q6XPS3 522 aa17.69■□□□□ 0.42
CDK9-204ENST00000491521 PDZRN3Q9UPQ7 1066 aa17.69■□□□□ 0.42
CDK9-204ENST00000491521 MAP3K15Q6ZN16 1313 aa17.69■□□□□ 0.42
CDK9-204ENST00000491521 SLX4Q8IY92 1834 aa17.68■□□□□ 0.42
CDK9-204ENST00000491521 ANXA1P04083 346 aa17.68■□□□□ 0.42
CDK9-204ENST00000491521 LMNB1P20700 586 aa17.68■□□□□ 0.42
CDK9-204ENST00000491521 TRIM35Q9UPQ4 493 aa17.68■□□□□ 0.42
CDK9-204ENST00000491521 ZBED9Q6R2W3 1325 aa17.68■□□□□ 0.42
CDK9-204ENST00000491521 NFKBIEO00221 500 aa17.67■□□□□ 0.42
CDK9-204ENST00000491521 SRGNP10124 158 aa17.67■□□□□ 0.42
CDK9-204ENST00000491521 PRELPP51888 382 aa17.67■□□□□ 0.42
CDK9-204ENST00000491521 CCDC27Q2M243 656 aa17.67■□□□□ 0.42
CDK9-204ENST00000491521 KRT24Q2M2I5 525 aa17.67■□□□□ 0.42
CDK9-204ENST00000491521 NCBP3Q53F19 620 aaKnown RBP17.67■□□□□ 0.42
CDK9-204ENST00000491521 STYK1Q6J9G0 422 aa17.67■□□□□ 0.42
CDK9-204ENST00000491521 PRPF40BQ6NWY9 871 aaKnown RBP17.67■□□□□ 0.42
CDK9-204ENST00000491521 WWC1Q8IX03 1113 aa17.67■□□□□ 0.42
CDK9-204ENST00000491521 MASTLQ96GX5 879 aa17.67■□□□□ 0.42
CDK9-204ENST00000491521 PROSER3Q2NL68 480 aa17.66■□□□□ 0.42
CDK9-204ENST00000491521 NUTM1Q86Y26 1132 aa17.66■□□□□ 0.42
CDK9-204ENST00000491521 CNKSR1Q969H4 720 aa17.66■□□□□ 0.42
CDK9-204ENST00000491521 TIAM2Q8IVF5 1701 aa17.65■□□□□ 0.42
CDK9-204ENST00000491521 ERVV-1B6SEH8 477 aa17.65■□□□□ 0.42
CDK9-204ENST00000491521 C16orf71Q8IYS4 520 aaPredicted RBP17.65■□□□□ 0.42
CDK9-204ENST00000491521 BABAM1Q9NWV8 329 aa17.65■□□□□ 0.42
CDK9-204ENST00000491521 KDM2BQ8NHM5 1336 aa17.65■□□□□ 0.42
CDK9-204ENST00000491521 AIMP1Q12904 312 aaKnown RBP17.64■□□□□ 0.41
CDK9-204ENST00000491521 RRAGCQ9HB90 399 aa17.64■□□□□ 0.41
CDK9-204ENST00000491521 ERBB4Q15303 1308 aa17.64■□□□□ 0.41
CDK9-204ENST00000491521 CHL1O00533 1208 aa17.63■□□□□ 0.41
CDK9-204ENST00000491521 RGL2O15211 777 aa17.63■□□□□ 0.41
CDK9-204ENST00000491521 NPR1P16066 1061 aa17.63■□□□□ 0.41
CDK9-204ENST00000491521 CALD1Q05682 793 aaKnown RBP17.63■□□□□ 0.41
CDK9-204ENST00000491521 GOLGA2Q08379 1002 aa17.63■□□□□ 0.41
CDK9-204ENST00000491521 PDIA6Q15084 440 aa17.63■□□□□ 0.41
CDK9-204ENST00000491521 ERFEQ4G0M1 354 aa17.63■□□□□ 0.41
CDK9-204ENST00000491521 WDR63Q8IWG1 891 aa17.63■□□□□ 0.41
CDK9-204ENST00000491521 NYXQ9GZU5 481 aa17.63■□□□□ 0.41
CDK9-204ENST00000491521 TNRC6CQ9HCJ0 1690 aaKnown RBP17.63■□□□□ 0.41
CDK9-204ENST00000491521 UBN2Q6ZU65 1347 aa17.63■□□□□ 0.41
CDK9-204ENST00000491521 ABCC12Q96J65 1359 aa17.63■□□□□ 0.41
CDK9-204ENST00000491521 ARFGEF2Q9Y6D5 1785 aa17.63■□□□□ 0.41
CDK9-204ENST00000491521 FER1L6Q2WGJ9 1857 aa17.63■□□□□ 0.41
CDK9-204ENST00000491521 SUSD4Q5VX71 490 aa17.62■□□□□ 0.41
CDK9-204ENST00000491521 OLFM4Q6UX06 510 aa17.61■□□□□ 0.41
CDK9-204ENST00000491521 XAGE3Q8WTP9 111 aa17.61■□□□□ 0.41
CDK9-204ENST00000491521 TAOK3Q9H2K8 898 aa17.61■□□□□ 0.41
CDK9-204ENST00000491521 TOMM70O94826 608 aa17.6■□□□□ 0.41
CDK9-204ENST00000491521 HSPA6P17066 643 aa17.6■□□□□ 0.41
CDK9-204ENST00000491521 GIGYF2Q6Y7W6 1299 aaKnown RBP17.6■□□□□ 0.41
CDK9-204ENST00000491521 COPS6Q7L5N1 327 aa17.6■□□□□ 0.41
CDK9-204ENST00000491521 LRP10Q7Z4F1 713 aa17.6■□□□□ 0.41
CDK9-204ENST00000491521 ZNF428Q96B54 188 aa17.6■□□□□ 0.41
CDK9-204ENST00000491521 CDCA7LQ96GN5 454 aa17.6■□□□□ 0.41
CDK9-204ENST00000491521 CHPF2Q9P2E5 772 aa17.6■□□□□ 0.41
CDK9-204ENST00000491521 ZNF521Q96K83 1311 aa17.6■□□□□ 0.41
CDK9-204ENST00000491521 SOGA3Q5TF21 947 aa17.59■□□□□ 0.41
CDK9-204ENST00000491521 HDGFL1Q5TGJ6 251 aa17.59■□□□□ 0.41
CDK9-204ENST00000491521 ZNF34Q8IZ26 560 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms