RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 KDM3BQ7LBC6 1761 aa17.21■□□□□ 0.35
NUP188-208ENST00000491502 DDR1Q08345 913 aa17.21■□□□□ 0.35
NUP188-208ENST00000491502 NFIXQ14938 502 aa17.21■□□□□ 0.35
NUP188-208ENST00000491502 SMC4Q9NTJ3 1288 aa17.21■□□□□ 0.35
NUP188-208ENST00000491502 KIF16BQ96L93 1317 aa17.21■□□□□ 0.34
NUP188-208ENST00000491502 PDE3AQ14432 1141 aa17.2■□□□□ 0.34
NUP188-208ENST00000491502 DZIP3Q86Y13 1208 aaKnown RBP17.2■□□□□ 0.34
NUP188-208ENST00000491502 C10orf71Q711Q0 1435 aa17.2■□□□□ 0.34
NUP188-208ENST00000491502 KIF13BQ9NQT8 1826 aa17.19■□□□□ 0.34
NUP188-208ENST00000491502 RGL2O15211 777 aa17.19■□□□□ 0.34
NUP188-208ENST00000491502 YBX3P16989 372 aaKnown RBP eCLIP17.19■□□□□ 0.34
NUP188-208ENST00000491502 BRPF1P55201 1214 aaPredicted RBP17.19■□□□□ 0.34
NUP188-208ENST00000491502 CLEC4GQ6UXB4 293 aa17.19■□□□□ 0.34
NUP188-208ENST00000491502 PPP4R2Q9NY27 417 aa17.19■□□□□ 0.34
NUP188-208ENST00000491502 NBPF26B4DH59 902 aa17.18■□□□□ 0.34
NUP188-208ENST00000491502 VAMP4O75379 141 aa17.18■□□□□ 0.34
NUP188-208ENST00000491502 BCAR3O75815 825 aa17.18■□□□□ 0.34
NUP188-208ENST00000491502 CAMTA2O94983 1202 aa17.18■□□□□ 0.34
NUP188-208ENST00000491502 SERPINB2P05120 415 aa17.18■□□□□ 0.34
NUP188-208ENST00000491502 IRX6P78412 446 aaPredicted RBP17.18■□□□□ 0.34
NUP188-208ENST00000491502 NBPF10Q6P3W6 841 aaKnown RBP17.18■□□□□ 0.34
NUP188-208ENST00000491502 NBPF15Q8N660 670 aa17.18■□□□□ 0.34
NUP188-208ENST00000491502 ZNF652Q9Y2D9 606 aa17.18■□□□□ 0.34
NUP188-208ENST00000491502 ERBB4Q15303 1308 aa17.18■□□□□ 0.34
NUP188-208ENST00000491502 CHD4Q14839 1912 aa17.17■□□□□ 0.34
NUP188-208ENST00000491502 A0A0G2JLW4 131 aa17.17■□□□□ 0.34
NUP188-208ENST00000491502 HOXB7P09629 217 aa17.17■□□□□ 0.34
NUP188-208ENST00000491502 PIP4K2AP48426 406 aaPredicted RBP17.17■□□□□ 0.34
NUP188-208ENST00000491502 ZKSCAN2Q63HK3 967 aa17.17■□□□□ 0.34
NUP188-208ENST00000491502 FRAT1Q92837 279 aaPredicted RBP17.17■□□□□ 0.34
NUP188-208ENST00000491502 SETDB2Q96T68 719 aa17.17■□□□□ 0.34
NUP188-208ENST00000491502 DPEP1P16444 411 aa17.16■□□□□ 0.34
NUP188-208ENST00000491502 AAMPQ13685 434 aa17.16■□□□□ 0.34
NUP188-208ENST00000491502 TBC1D9BQ66K14 1250 aa17.16■□□□□ 0.34
NUP188-208ENST00000491502 BICDL1Q6ZP65 573 aa17.16■□□□□ 0.34
NUP188-208ENST00000491502 C8orf58Q8NAV2 365 aa17.16■□□□□ 0.34
NUP188-208ENST00000491502 SSH1Q8WYL5 1049 aa17.16■□□□□ 0.34
NUP188-208ENST00000491502 PXDNLA1KZ92 1463 aa17.16■□□□□ 0.34
NUP188-208ENST00000491502 PLIN1O60240 522 aa17.15■□□□□ 0.34
NUP188-208ENST00000491502 LAMB4A4D0S4 1761 aa17.15■□□□□ 0.34
NUP188-208ENST00000491502 ARHGAP45Q92619 1136 aa17.14■□□□□ 0.33
NUP188-208ENST00000491502 STK31Q9BXU1 1019 aa17.14■□□□□ 0.33
NUP188-208ENST00000491502 PIM2Q9P1W9 311 aa17.14■□□□□ 0.33
NUP188-208ENST00000491502 PDZRN3Q9UPQ7 1066 aa17.14■□□□□ 0.33
NUP188-208ENST00000491502 CARMIL3Q8ND23 1372 aa17.14■□□□□ 0.33
NUP188-208ENST00000491502 ERVV-1B6SEH8 477 aa17.13■□□□□ 0.33
NUP188-208ENST00000491502 ELL2O00472 640 aaPredicted RBP17.13■□□□□ 0.33
NUP188-208ENST00000491502 CCDC30Q5VVM6 783 aa17.13■□□□□ 0.33
NUP188-208ENST00000491502 FTSJ3Q8IY81 847 aaKnown RBP17.13■□□□□ 0.33
NUP188-208ENST00000491502 TSPYL6Q8N831 410 aa17.13■□□□□ 0.33
NUP188-208ENST00000491502 CHMP4BQ9H444 224 aaKnown RBP17.13■□□□□ 0.33
NUP188-208ENST00000491502 SCN7AQ01118 1682 aa17.13■□□□□ 0.33
NUP188-208ENST00000491502 EIF2S2P20042 333 aaKnown RBP17.12■□□□□ 0.33
NUP188-208ENST00000491502 KCNA3P22001 575 aa17.12■□□□□ 0.33
NUP188-208ENST00000491502 KIF6Q6ZMV9 814 aa17.12■□□□□ 0.33
NUP188-208ENST00000491502 BCS1LQ9Y276 419 aa17.12■□□□□ 0.33
NUP188-208ENST00000491502 NRXN2Q9P2S2 1712 aa17.12■□□□□ 0.33
NUP188-208ENST00000491502 N4BP2Q86UW6 1770 aaPredicted RBP17.12■□□□□ 0.33
NUP188-208ENST00000491502 AFDNP55196 1824 aaKnown RBP17.12■□□□□ 0.33
NUP188-208ENST00000491502 NPHP1O15259 732 aa17.11■□□□□ 0.33
NUP188-208ENST00000491502 MYL6BP14649 208 aa17.11■□□□□ 0.33
NUP188-208ENST00000491502 ATF7IPQ6VMQ6 1270 aa17.11■□□□□ 0.33
NUP188-208ENST00000491502 MRPL50Q8N5N7 158 aaKnown RBP17.11■□□□□ 0.33
NUP188-208ENST00000491502 BRIP1Q9BX63 1249 aa17.11■□□□□ 0.33
NUP188-208ENST00000491502 BCL2L13Q9BXK5 485 aa17.11■□□□□ 0.33
NUP188-208ENST00000491502 API5Q9BZZ5 524 aaKnown RBP17.11■□□□□ 0.33
NUP188-208ENST00000491502 WWC3Q9ULE0 1092 aa17.11■□□□□ 0.33
NUP188-208ENST00000491502 KIAA1551Q9HCM1 1747 aa17.1■□□□□ 0.33
NUP188-208ENST00000491502 H0YIN7 160 aa17.1■□□□□ 0.33
NUP188-208ENST00000491502 PDE6BP35913 854 aa17.1■□□□□ 0.33
NUP188-208ENST00000491502 DALRD3Q5D0E6 543 aaKnown RBP17.1■□□□□ 0.33
NUP188-208ENST00000491502 DZIP1LQ8IYY4 767 aaKnown RBP17.1■□□□□ 0.33
NUP188-208ENST00000491502 NOB1Q9ULX3 412 aaKnown RBP17.1■□□□□ 0.33
NUP188-208ENST00000491502 BCORQ6W2J9 1755 aa17.1■□□□□ 0.33
NUP188-208ENST00000491502 CHRNA5P30532 468 aa17.09■□□□□ 0.33
NUP188-208ENST00000491502 ST5P78524 1137 aa17.09■□□□□ 0.33
NUP188-208ENST00000491502 PRR5LQ6MZQ0 368 aa17.09■□□□□ 0.33
NUP188-208ENST00000491502 TPTE2Q6XPS3 522 aa17.09■□□□□ 0.33
NUP188-208ENST00000491502 NBPF5PQ86XG9 351 aaPredicted RBP17.09■□□□□ 0.33
NUP188-208ENST00000491502 CNBD1Q8NA66 436 aa17.09■□□□□ 0.33
NUP188-208ENST00000491502 NIP7Q9Y221 180 aaKnown RBP eCLIP17.09■□□□□ 0.33
NUP188-208ENST00000491502 MAP3K15Q6ZN16 1313 aa17.09■□□□□ 0.33
NUP188-208ENST00000491502 PTPRCP08575 1304 aa17.08■□□□□ 0.32
NUP188-208ENST00000491502 PDIA6Q15084 440 aa17.08■□□□□ 0.32
NUP188-208ENST00000491502 HLFQ16534 295 aa17.08■□□□□ 0.32
NUP188-208ENST00000491502 C2CD5Q86YS7 1000 aa17.08■□□□□ 0.32
NUP188-208ENST00000491502 EXOC6Q8TAG9 804 aa17.08■□□□□ 0.32
NUP188-208ENST00000491502 CCDC136Q96JN2 1154 aa17.08■□□□□ 0.32
NUP188-208ENST00000491502 CRBNQ96SW2 442 aa17.08■□□□□ 0.32
NUP188-208ENST00000491502 HDGFL1Q5TGJ6 251 aa17.07■□□□□ 0.32
NUP188-208ENST00000491502 TTLL7Q6ZT98 887 aa17.07■□□□□ 0.32
NUP188-208ENST00000491502 DDX21Q9NR30 783 aaKnown RBP eCLIP17.07■□□□□ 0.32
NUP188-208ENST00000491502 GIGYF2Q6Y7W6 1299 aaKnown RBP17.06■□□□□ 0.32
NUP188-208ENST00000491502 ARHGAP27Q6ZUM4 889 aa17.06■□□□□ 0.32
NUP188-208ENST00000491502 TTLL6Q8N841 843 aa17.06■□□□□ 0.32
NUP188-208ENST00000491502 ZNF784Q8NCA9 323 aaPredicted RBP17.06■□□□□ 0.32
NUP188-208ENST00000491502 UTRNP46939 3433 aa17.06■□□□□ 0.32
NUP188-208ENST00000491502 GOLGB1Q14789 3259 aaKnown RBP17.06■□□□□ 0.32
NUP188-208ENST00000491502 BRCA1P38398 1863 aaKnown RBP17.05■□□□□ 0.32
NUP188-208ENST00000491502 SLC4A2P04920 1241 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms