RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 SOX10P56693 466 aa15.11■□□□□ 0.01
SRGAP3-210ENST00000491467 AEBP1Q8IUX7 1158 aa15.11■□□□□ 0.01
SRGAP3-210ENST00000491467 RTF1Q92541 710 aaKnown RBP15.11■□□□□ 0.01
SRGAP3-210ENST00000491467 API5Q9BZZ5 524 aaKnown RBP15.11■□□□□ 0.01
SRGAP3-210ENST00000491467 ZNF219Q9P2Y4 722 aaPredicted RBP15.11■□□□□ 0.01
SRGAP3-210ENST00000491467 ZC3H4Q9UPT8 1303 aaKnown RBP15.11■□□□□ 0.01
SRGAP3-210ENST00000491467 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.1■□□□□ 0.01
SRGAP3-210ENST00000491467 TMEM88BA6NKF7 163 aa15.1■□□□□ 0.01
SRGAP3-210ENST00000491467 HDAC1Q13547 482 aaPredicted RBP15.1■□□□□ 0.01
SRGAP3-210ENST00000491467 AMIGO3Q86WK7 504 aa15.1■□□□□ 0.01
SRGAP3-210ENST00000491467 DCAF5Q96JK2 942 aa15.1■□□□□ 0.01
SRGAP3-210ENST00000491467 PIM2Q9P1W9 311 aa15.1■□□□□ 0.01
SRGAP3-210ENST00000491467 POTECB2RU33 542 aa15.09■□□□□ 0.01
SRGAP3-210ENST00000491467 DGKZQ13574 1117 aa15.09■□□□□ 0.01
SRGAP3-210ENST00000491467 DEFB115Q30KQ5 88 aa15.09■□□□□ 0.01
SRGAP3-210ENST00000491467 DALRD3Q5D0E6 543 aaKnown RBP15.08■□□□□ 0
SRGAP3-210ENST00000491467 THUMPD2Q9BTF0 503 aaKnown RBP15.08■□□□□ 0
SRGAP3-210ENST00000491467 TSKSQ9UJT2 592 aa15.08■□□□□ 0
SRGAP3-210ENST00000491467 PCDHB15Q9Y5E8 787 aa15.08■□□□□ 0
SRGAP3-210ENST00000491467 WDR33Q9C0J8 1336 aaKnown RBP15.08■□□□□ 0
SRGAP3-210ENST00000491467 RGPD2P0DJD1 1756 aa15.08■□□□□ 0
SRGAP3-210ENST00000491467 MTHFSDQ2M296 383 aaKnown RBP15.07■□□□□ 0
SRGAP3-210ENST00000491467 HABP4Q5JVS0 413 aaKnown RBP15.07■□□□□ 0
SRGAP3-210ENST00000491467 ITPRIPQ8IWB1 547 aa15.07■□□□□ 0
SRGAP3-210ENST00000491467 CHMP4AQ9BY43 222 aa15.07■□□□□ 0
SRGAP3-210ENST00000491467 ZBTB40Q9NUA8 1239 aa15.07■□□□□ 0
SRGAP3-210ENST00000491467 GNAT3A8MTJ3 354 aa15.06■□□□□ 0
SRGAP3-210ENST00000491467 KCNA3P22001 575 aa15.06■□□□□ 0
SRGAP3-210ENST00000491467 RASSF7Q02833 373 aa15.06■□□□□ 0
SRGAP3-210ENST00000491467 TMEM57Q8N5G2 664 aa15.06■□□□□ 0
SRGAP3-210ENST00000491467 C8orf58Q8NAV2 365 aa15.06■□□□□ 0
SRGAP3-210ENST00000491467 CCDC87Q9NVE4 849 aa15.06■□□□□ 0
SRGAP3-210ENST00000491467 TNNQ9UQP3 1299 aa15.06■□□□□ 0
SRGAP3-210ENST00000491467 POTEIP0CG38 1075 aa15.05■□□□□ -0
SRGAP3-210ENST00000491467 POTEJP0CG39 1038 aa15.05■□□□□ -0
SRGAP3-210ENST00000491467 DPY19L2Q6NUT2 758 aa15.05■□□□□ -0
SRGAP3-210ENST00000491467 TSPYL6Q8N831 410 aa15.05■□□□□ -0
SRGAP3-210ENST00000491467 IPO9Q96P70 1041 aaKnown RBP15.05■□□□□ -0
SRGAP3-210ENST00000491467 ABCC4O15439 1325 aa15.05■□□□□ -0
SRGAP3-210ENST00000491467 FAM208AQ9UK61 1670 aaKnown RBP15.05■□□□□ -0
SRGAP3-210ENST00000491467 NCAPD2Q15021 1401 aa15.04■□□□□ -0
SRGAP3-210ENST00000491467 PTPRCP08575 1304 aa15.04■□□□□ -0
SRGAP3-210ENST00000491467 PASKQ96RG2 1323 aa15.04■□□□□ -0
SRGAP3-210ENST00000491467 DCTN1Q14203 1278 aa15.04■□□□□ -0
SRGAP3-210ENST00000491467 LMNB1P20700 586 aa15.03■□□□□ -0
SRGAP3-210ENST00000491467 SSFA2P28290 1259 aa15.03■□□□□ -0
SRGAP3-210ENST00000491467 MCM10Q7L590 875 aa15.03■□□□□ -0
SRGAP3-210ENST00000491467 RASSF10A6NK89 507 aa15.02■□□□□ -0
SRGAP3-210ENST00000491467 ZBTB7BO15156 539 aaPredicted RBP15.02■□□□□ -0
SRGAP3-210ENST00000491467 SMC5Q8IY18 1101 aa15.02■□□□□ -0
SRGAP3-210ENST00000491467 DDRGK1Q96HY6 314 aa15.02■□□□□ -0
SRGAP3-210ENST00000491467 C4AP0C0L4 1744 aa15.01□□□□□ -0.01
SRGAP3-210ENST00000491467 AMOTQ4VCS5 1084 aa15.01□□□□□ -0.01
SRGAP3-210ENST00000491467 INTS3Q68E01 1043 aaKnown RBP15.01□□□□□ -0.01
SRGAP3-210ENST00000491467 ERICH6Q7L0X2 663 aa15.01□□□□□ -0.01
SRGAP3-210ENST00000491467 PDZRN3Q9UPQ7 1066 aa15.01□□□□□ -0.01
SRGAP3-210ENST00000491467 KDM3BQ7LBC6 1761 aa15.01□□□□□ -0.01
SRGAP3-210ENST00000491467 RGS3P49796 1198 aa15□□□□□ -0.01
SRGAP3-210ENST00000491467 TAF7Q15545 349 aaPredicted RBP15□□□□□ -0.01
SRGAP3-210ENST00000491467 NBPF15Q8N660 670 aa15□□□□□ -0.01
SRGAP3-210ENST00000491467 TSPYL4Q9UJ04 414 aa15□□□□□ -0.01
SRGAP3-210ENST00000491467 ELL2O00472 640 aaPredicted RBP14.99□□□□□ -0.01
SRGAP3-210ENST00000491467 GRM1Q13255 1194 aa14.99□□□□□ -0.01
SRGAP3-210ENST00000491467 C8orf34Q49A92 452 aa14.99□□□□□ -0.01
SRGAP3-210ENST00000491467 PLEKHO1Q53GL0 409 aaPredicted RBP14.99□□□□□ -0.01
SRGAP3-210ENST00000491467 PAXIP1Q6ZW49 1069 aaPredicted RBP14.99□□□□□ -0.01
SRGAP3-210ENST00000491467 ANP32EQ9BTT0 268 aa14.99□□□□□ -0.01
SRGAP3-210ENST00000491467 ABT1Q9ULW3 272 aaKnown RBP14.99□□□□□ -0.01
SRGAP3-210ENST00000491467 KDM6AO15550 1401 aaPredicted RBP14.99□□□□□ -0.01
SRGAP3-210ENST00000491467 PALLDQ8WX93 1383 aa14.98□□□□□ -0.01
SRGAP3-210ENST00000491467 SLC17A8Q8NDX2 589 aa14.98□□□□□ -0.01
SRGAP3-210ENST00000491467 ZBTB47Q9UFB7 747 aaPredicted RBP14.98□□□□□ -0.01
SRGAP3-210ENST00000491467 PARP3Q9Y6F1 533 aa14.98□□□□□ -0.01
SRGAP3-210ENST00000491467 DICER1Q9UPY3 1922 aaKnown RBP14.98□□□□□ -0.01
SRGAP3-210ENST00000491467 CCDC30Q5VVM6 783 aa14.97□□□□□ -0.01
SRGAP3-210ENST00000491467 NLGN1Q8N2Q7 840 aa14.97□□□□□ -0.01
SRGAP3-210ENST00000491467 ANKRD24Q8TF21 1146 aa14.97□□□□□ -0.01
SRGAP3-210ENST00000491467 CEMIPQ8WUJ3 1361 aa14.97□□□□□ -0.01
SRGAP3-210ENST00000491467 THSD7BQ9C0I4 1608 aa14.96□□□□□ -0.01
SRGAP3-210ENST00000491467 SIPA1L3O60292 1781 aaPredicted RBP14.96□□□□□ -0.01
SRGAP3-210ENST00000491467 LTBP1Q14766 1721 aa14.96□□□□□ -0.01
SRGAP3-210ENST00000491467 AKAP4Q5JQC9 854 aa14.96□□□□□ -0.01
SRGAP3-210ENST00000491467 NBPF6Q5VWK0 638 aa14.96□□□□□ -0.01
SRGAP3-210ENST00000491467 LTV1Q96GA3 475 aaPredicted RBP14.96□□□□□ -0.01
SRGAP3-210ENST00000491467 NBPF4Q96M43 638 aa14.96□□□□□ -0.01
SRGAP3-210ENST00000491467 NOP58Q9Y2X3 529 aaKnown RBP14.96□□□□□ -0.01
SRGAP3-210ENST00000491467 ADAMTS7Q9UKP4 1686 aa14.96□□□□□ -0.01
SRGAP3-210ENST00000491467 HOXB7P09629 217 aa14.95□□□□□ -0.02
SRGAP3-210ENST00000491467 LDHDQ86WU2 507 aa14.95□□□□□ -0.02
SRGAP3-210ENST00000491467 IL17REQ8NFR9 667 aa14.95□□□□□ -0.02
SRGAP3-210ENST00000491467 GPR101Q96P66 508 aaPredicted RBP14.95□□□□□ -0.02
SRGAP3-210ENST00000491467 STK31Q9BXU1 1019 aa14.95□□□□□ -0.02
SRGAP3-210ENST00000491467 SCN11AQ9UI33 1791 aa14.94□□□□□ -0.02
SRGAP3-210ENST00000491467 GNPATO15228 680 aa14.94□□□□□ -0.02
SRGAP3-210ENST00000491467 ITGBL1O95965 494 aaPredicted RBP14.94□□□□□ -0.02
SRGAP3-210ENST00000491467 CHRNA5P30532 468 aa14.94□□□□□ -0.02
SRGAP3-210ENST00000491467 FXR1P51114 621 aaKnown RBP eCLIP14.94□□□□□ -0.02
SRGAP3-210ENST00000491467 RPAP2Q8IXW5 612 aaPredicted RBP14.94□□□□□ -0.02
SRGAP3-210ENST00000491467 SLC4A2P04920 1241 aa14.93□□□□□ -0.02
SRGAP3-210ENST00000491467 ECE1P42892 770 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms