RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 NFKBIEO00221 500 aa20.83■□□□□ 0.93
SMPD4-220ENST00000491319 LMNB1P20700 586 aa20.83■□□□□ 0.93
SMPD4-220ENST00000491319 THUMPD2Q9BTF0 503 aaKnown RBP20.83■□□□□ 0.93
SMPD4-220ENST00000491319 ZC3H4Q9UPT8 1303 aaKnown RBP20.82■□□□□ 0.92
SMPD4-220ENST00000491319 ST5P78524 1137 aa20.82■□□□□ 0.92
SMPD4-220ENST00000491319 NFE2L2Q16236 605 aa20.82■□□□□ 0.92
SMPD4-220ENST00000491319 ZNF219Q9P2Y4 722 aaPredicted RBP20.82■□□□□ 0.92
SMPD4-220ENST00000491319 PDZRN3Q9UPQ7 1066 aa20.82■□□□□ 0.92
SMPD4-220ENST00000491319 CLEC4GQ6UXB4 293 aa20.81■□□□□ 0.92
SMPD4-220ENST00000491319 ZNF652Q9Y2D9 606 aa20.81■□□□□ 0.92
SMPD4-220ENST00000491319 MAPK8IP3Q9UPT6 1336 aa20.8■□□□□ 0.92
SMPD4-220ENST00000491319 C21orf2O43822 256 aa20.8■□□□□ 0.92
SMPD4-220ENST00000491319 C16orf71Q8IYS4 520 aaPredicted RBP20.8■□□□□ 0.92
SMPD4-220ENST00000491319 NBPF5PQ86XG9 351 aaPredicted RBP20.79■□□□□ 0.92
SMPD4-220ENST00000491319 RBM46Q8TBY0 533 aaKnown RBP20.79■□□□□ 0.92
SMPD4-220ENST00000491319 RRAGCQ9HB90 399 aa20.79■□□□□ 0.92
SMPD4-220ENST00000491319 SRGNP10124 158 aa20.78■□□□□ 0.92
SMPD4-220ENST00000491319 PNISRQ8TF01 805 aaKnown RBP20.78■□□□□ 0.92
SMPD4-220ENST00000491319 APLP1P51693 650 aa20.77■□□□□ 0.92
SMPD4-220ENST00000491319 EIF4A1P60842 406 aaKnown RBP20.77■□□□□ 0.92
SMPD4-220ENST00000491319 STYK1Q6J9G0 422 aa20.77■□□□□ 0.92
SMPD4-220ENST00000491319 NIP7Q9Y221 180 aaKnown RBP eCLIP20.77■□□□□ 0.92
SMPD4-220ENST00000491319 RALBP1Q15311 655 aa20.76■□□□□ 0.91
SMPD4-220ENST00000491319 HLFQ16534 295 aa20.76■□□□□ 0.91
SMPD4-220ENST00000491319 PRPF40BQ6NWY9 871 aaKnown RBP20.76■□□□□ 0.91
SMPD4-220ENST00000491319 CNKSR1Q969H4 720 aa20.76■□□□□ 0.91
SMPD4-220ENST00000491319 MASTLQ96GX5 879 aa20.76■□□□□ 0.91
SMPD4-220ENST00000491319 PNNQ9H307 717 aaKnown RBP20.76■□□□□ 0.91
SMPD4-220ENST00000491319 GLTPD2A6NH11 291 aa20.75■□□□□ 0.91
SMPD4-220ENST00000491319 FAM177BA6PVY3 158 aa20.75■□□□□ 0.91
SMPD4-220ENST00000491319 RGL2O15211 777 aa20.75■□□□□ 0.91
SMPD4-220ENST00000491319 NGEFQ8N5V2 710 aa20.75■□□□□ 0.91
SMPD4-220ENST00000491319 ANKRD36CQ5JPF3 1778 aa20.74■□□□□ 0.91
SMPD4-220ENST00000491319 DDX10Q13206 875 aaKnown RBP20.73■□□□□ 0.91
SMPD4-220ENST00000491319 TAOK3Q9H2K8 898 aa20.73■□□□□ 0.91
SMPD4-220ENST00000491319 RRP7AQ9Y3A4 280 aaKnown RBP20.73■□□□□ 0.91
SMPD4-220ENST00000491319 LTBP3Q9NS15 1303 aa20.73■□□□□ 0.91
SMPD4-220ENST00000491319 FSTL1Q12841 308 aa20.72■□□□□ 0.91
SMPD4-220ENST00000491319 TPTE2Q6XPS3 522 aa20.72■□□□□ 0.91
SMPD4-220ENST00000491319 ABCC12Q96J65 1359 aa20.72■□□□□ 0.91
SMPD4-220ENST00000491319 MYL6BP14649 208 aa20.71■□□□□ 0.91
SMPD4-220ENST00000491319 RIPK4P57078 832 aa20.71■□□□□ 0.91
SMPD4-220ENST00000491319 ERFEQ4G0M1 354 aa20.71■□□□□ 0.91
SMPD4-220ENST00000491319 TTLL7Q6ZT98 887 aa20.71■□□□□ 0.91
SMPD4-220ENST00000491319 TSPYL4Q9UJ04 414 aa20.71■□□□□ 0.91
SMPD4-220ENST00000491319 MAP3K15Q6ZN16 1313 aa20.71■□□□□ 0.91
SMPD4-220ENST00000491319 MYBBP1AQ9BQG0 1328 aaKnown RBP20.71■□□□□ 0.91
SMPD4-220ENST00000491319 KLRG2A4D1S0 409 aaPredicted RBP20.7■□□□□ 0.9
SMPD4-220ENST00000491319 NPR1P16066 1061 aa20.7■□□□□ 0.9
SMPD4-220ENST00000491319 ERVV-1B6SEH8 477 aa20.69■□□□□ 0.9
SMPD4-220ENST00000491319 VEGFAP15692 232 aaPredicted RBP20.69■□□□□ 0.9
SMPD4-220ENST00000491319 HTRA3P83110 453 aa20.69■□□□□ 0.9
SMPD4-220ENST00000491319 SOGA3Q5TF21 947 aa20.69■□□□□ 0.9
SMPD4-220ENST00000491319 KIF6Q6ZMV9 814 aa20.69■□□□□ 0.9
SMPD4-220ENST00000491319 LAMB2P55268 1798 aa20.68■□□□□ 0.9
SMPD4-220ENST00000491319 TMPOP42166 694 aaKnown RBP20.68■□□□□ 0.9
SMPD4-220ENST00000491319 DNAJC5GQ8N7S2 189 aa20.68■□□□□ 0.9
SMPD4-220ENST00000491319 SMC1BQ8NDV3 1235 aa20.68■□□□□ 0.9
SMPD4-220ENST00000491319 C7orf43Q8WVR3 580 aa20.68■□□□□ 0.9
SMPD4-220ENST00000491319 ZBTB3Q9H5J0 574 aa20.68■□□□□ 0.9
SMPD4-220ENST00000491319 POTECB2RU33 542 aa20.67■□□□□ 0.9
SMPD4-220ENST00000491319 GTF2E1P29083 439 aaPredicted RBP20.67■□□□□ 0.9
SMPD4-220ENST00000491319 CCDC93Q567U6 631 aa20.67■□□□□ 0.9
SMPD4-220ENST00000491319 OLFM4Q6UX06 510 aa20.67■□□□□ 0.9
SMPD4-220ENST00000491319 NUTM1Q86Y26 1132 aa20.67■□□□□ 0.9
SMPD4-220ENST00000491319 CCDC146Q8IYE0 955 aa20.67■□□□□ 0.9
SMPD4-220ENST00000491319 UBN2Q6ZU65 1347 aa20.67■□□□□ 0.9
SMPD4-220ENST00000491319 SCN4AP35499 1836 aa20.67■□□□□ 0.9
SMPD4-220ENST00000491319 GPTP24298 496 aa20.66■□□□□ 0.9
SMPD4-220ENST00000491319 DPY19L2Q6NUT2 758 aa20.66■□□□□ 0.9
SMPD4-220ENST00000491319 ERBB4Q15303 1308 aa20.66■□□□□ 0.9
SMPD4-220ENST00000491319 IBTKQ9P2D0 1353 aaPredicted RBP20.66■□□□□ 0.9
SMPD4-220ENST00000491319 LMOD3Q0VAK6 560 aa20.65■□□□□ 0.9
SMPD4-220ENST00000491319 NYXQ9GZU5 481 aa20.65■□□□□ 0.9
SMPD4-220ENST00000491319 RIC1Q4ADV7 1423 aa20.64■□□□□ 0.89
SMPD4-220ENST00000491319 EIF2S2P20042 333 aaKnown RBP20.64■□□□□ 0.89
SMPD4-220ENST00000491319 SNED1Q8TER0 1413 aa20.63■□□□□ 0.89
SMPD4-220ENST00000491319 ANXA1P04083 346 aa20.63■□□□□ 0.89
SMPD4-220ENST00000491319 NEUROD2Q15784 382 aa20.63■□□□□ 0.89
SMPD4-220ENST00000491319 PROSER3Q2NL68 480 aa20.63■□□□□ 0.89
SMPD4-220ENST00000491319 LRP10Q7Z4F1 713 aa20.63■□□□□ 0.89
SMPD4-220ENST00000491319 DDNO94850 711 aaPredicted RBP20.62■□□□□ 0.89
SMPD4-220ENST00000491319 FKBP4Q02790 459 aaKnown RBP eCLIP20.62■□□□□ 0.89
SMPD4-220ENST00000491319 PDIA6Q15084 440 aa20.62■□□□□ 0.89
SMPD4-220ENST00000491319 CRY2Q49AN0 593 aa20.62■□□□□ 0.89
SMPD4-220ENST00000491319 SUSD4Q5VX71 490 aa20.62■□□□□ 0.89
SMPD4-220ENST00000491319 GIGYF2Q6Y7W6 1299 aaKnown RBP20.62■□□□□ 0.89
SMPD4-220ENST00000491319 ZNF34Q8IZ26 560 aa20.62■□□□□ 0.89
SMPD4-220ENST00000491319 BABAM1Q9NWV8 329 aa20.62■□□□□ 0.89
SMPD4-220ENST00000491319 ALDH1B1P30837 517 aa20.61■□□□□ 0.89
SMPD4-220ENST00000491319 ZNF277Q9NRM2 450 aaPredicted RBP20.61■□□□□ 0.89
SMPD4-220ENST00000491319 NTSR2O95665 410 aa20.6■□□□□ 0.89
SMPD4-220ENST00000491319 WDR43Q15061 677 aaKnown RBP eCLIP20.6■□□□□ 0.89
SMPD4-220ENST00000491319 NECTIN2Q92692 538 aa20.6■□□□□ 0.89
SMPD4-220ENST00000491319 KLRG1Q96E93 195 aa20.6■□□□□ 0.89
SMPD4-220ENST00000491319 TAF1P21675 1872 aa20.59■□□□□ 0.89
SMPD4-220ENST00000491319 KRT24Q2M2I5 525 aa20.59■□□□□ 0.89
SMPD4-220ENST00000491319 RTKN2Q8IZC4 609 aa20.59■□□□□ 0.89
SMPD4-220ENST00000491319 RPGRQ92834 1020 aaKnown RBP20.59■□□□□ 0.89
SMPD4-220ENST00000491319 RUNDC1Q96C34 613 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms