RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 TTLL7Q6ZT98 887 aa23.69■■□□□ 1.38
MCF2L-230ENST00000491028 DZIP3Q86Y13 1208 aaKnown RBP23.69■■□□□ 1.38
MCF2L-230ENST00000491028 PLBD2Q8NHP8 589 aa23.69■■□□□ 1.38
MCF2L-230ENST00000491028 ABCC4O15439 1325 aa23.68■■□□□ 1.38
MCF2L-230ENST00000491028 MAP3K15Q6ZN16 1313 aa23.68■■□□□ 1.38
MCF2L-230ENST00000491028 PLIN1O60240 522 aa23.68■■□□□ 1.38
MCF2L-230ENST00000491028 ANKRD13DQ6ZTN6 518 aa23.68■■□□□ 1.38
MCF2L-230ENST00000491028 STK32BQ9NY57 414 aa23.68■■□□□ 1.38
MCF2L-230ENST00000491028 PI4KAP2A4QPH2 592 aa23.67■■□□□ 1.38
MCF2L-230ENST00000491028 PDE3AQ14432 1141 aa23.67■■□□□ 1.38
MCF2L-230ENST00000491028 RIC3Q7Z5B4 369 aa23.67■■□□□ 1.38
MCF2L-230ENST00000491028 PI4KAP1Q8N8J0 262 aa23.67■■□□□ 1.38
MCF2L-230ENST00000491028 FLAD1Q8NFF5 587 aa23.67■■□□□ 1.38
MCF2L-230ENST00000491028 ANKRD36CQ5JPF3 1778 aa23.67■■□□□ 1.38
MCF2L-230ENST00000491028 ERVV-1B6SEH8 477 aa23.66■■□□□ 1.38
MCF2L-230ENST00000491028 RGL2O15211 777 aa23.66■■□□□ 1.38
MCF2L-230ENST00000491028 TRAPPC3LQ5T215 181 aa23.66■■□□□ 1.38
MCF2L-230ENST00000491028 FTSJ3Q8IY81 847 aaKnown RBP23.66■■□□□ 1.38
MCF2L-230ENST00000491028 DZIP1LQ8IYY4 767 aaKnown RBP23.66■■□□□ 1.38
MCF2L-230ENST00000491028 DNAAF4Q8WXU2 420 aa23.66■■□□□ 1.38
MCF2L-230ENST00000491028 ANO8Q9HCE9 1232 aaPredicted RBP23.66■■□□□ 1.38
MCF2L-230ENST00000491028 TFCP2L1Q9NZI6 479 aa23.66■■□□□ 1.38
MCF2L-230ENST00000491028 NUP98P52948 1817 aa23.66■■□□□ 1.38
MCF2L-230ENST00000491028 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.65■■□□□ 1.38
MCF2L-230ENST00000491028 SLC15A2Q16348 729 aa23.65■■□□□ 1.38
MCF2L-230ENST00000491028 MAP3K2Q9Y2U5 619 aa23.65■■□□□ 1.38
MCF2L-230ENST00000491028 ATP10DQ9P241 1426 aa23.65■■□□□ 1.38
MCF2L-230ENST00000491028 PHF14O94880 888 aa23.64■■□□□ 1.37
MCF2L-230ENST00000491028 AMIGO3Q86WK7 504 aa23.64■■□□□ 1.37
MCF2L-230ENST00000491028 ARHGEF1Q92888 912 aaKnown RBP23.64■■□□□ 1.37
MCF2L-230ENST00000491028 ARXQ96QS3 562 aa23.64■■□□□ 1.37
MCF2L-230ENST00000491028 ZBTB3Q9H5J0 574 aa23.64■■□□□ 1.37
MCF2L-230ENST00000491028 NARFQ9UHQ1 456 aa23.64■■□□□ 1.37
MCF2L-230ENST00000491028 TBC1D2BQ9UPU7 963 aa23.64■■□□□ 1.37
MCF2L-230ENST00000491028 F6X3S4 739 aa23.63■■□□□ 1.37
MCF2L-230ENST00000491028 CAMTA2O94983 1202 aa23.63■■□□□ 1.37
MCF2L-230ENST00000491028 CLUAP1Q96AJ1 413 aa23.63■■□□□ 1.37
MCF2L-230ENST00000491028 TNNQ9UQP3 1299 aa23.63■■□□□ 1.37
MCF2L-230ENST00000491028 RFC4P35249 363 aa23.62■■□□□ 1.37
MCF2L-230ENST00000491028 HSP90AB3PQ58FF7 597 aa23.62■■□□□ 1.37
MCF2L-230ENST00000491028 GIGYF2Q6Y7W6 1299 aaKnown RBP23.62■■□□□ 1.37
MCF2L-230ENST00000491028 METTL22Q9BUU2 404 aaPredicted RBP23.62■■□□□ 1.37
MCF2L-230ENST00000491028 USP42Q9H9J4 1324 aaKnown RBP23.61■■□□□ 1.37
MCF2L-230ENST00000491028 ZPR1O75312 459 aa23.61■■□□□ 1.37
MCF2L-230ENST00000491028 CCT4P50991 539 aaKnown RBP23.61■■□□□ 1.37
MCF2L-230ENST00000491028 NEXNQ0ZGT2 675 aa23.61■■□□□ 1.37
MCF2L-230ENST00000491028 ZNF652Q9Y2D9 606 aa23.61■■□□□ 1.37
MCF2L-230ENST00000491028 AFDNP55196 1824 aaKnown RBP23.61■■□□□ 1.37
MCF2L-230ENST00000491028 PNPLA7Q6ZV29 1317 aa23.6■■□□□ 1.37
MCF2L-230ENST00000491028 INTS3Q68E01 1043 aaKnown RBP23.6■■□□□ 1.37
MCF2L-230ENST00000491028 SLC4A10Q6U841 1118 aa23.6■■□□□ 1.37
MCF2L-230ENST00000491028 CLEC4GQ6UXB4 293 aa23.6■■□□□ 1.37
MCF2L-230ENST00000491028 SMIM5Q71RC9 77 aa23.6■■□□□ 1.37
MCF2L-230ENST00000491028 IBTKQ9P2D0 1353 aaPredicted RBP23.6■■□□□ 1.37
MCF2L-230ENST00000491028 RLBP1P12271 317 aa23.59■■□□□ 1.37
MCF2L-230ENST00000491028 C20orf194Q5TEA3 1177 aa23.59■■□□□ 1.37
MCF2L-230ENST00000491028 PANK1Q8TE04 598 aa23.59■■□□□ 1.37
MCF2L-230ENST00000491028 BEND3Q5T5X7 828 aa23.58■■□□□ 1.37
MCF2L-230ENST00000491028 USPL1Q5W0Q7 1092 aa23.58■■□□□ 1.37
MCF2L-230ENST00000491028 TMEM57Q8N5G2 664 aa23.58■■□□□ 1.37
MCF2L-230ENST00000491028 LINS1Q8NG48 757 aa23.58■■□□□ 1.37
MCF2L-230ENST00000491028 MYD88Q99836 296 aa23.58■■□□□ 1.37
MCF2L-230ENST00000491028 SRCIN1Q9C0H9 1055 aa23.58■■□□□ 1.37
MCF2L-230ENST00000491028 ALDH1L1O75891 902 aa23.57■■□□□ 1.36
MCF2L-230ENST00000491028 TCIRG1Q13488 830 aa23.57■■□□□ 1.36
MCF2L-230ENST00000491028 HLFQ16534 295 aa23.57■■□□□ 1.36
MCF2L-230ENST00000491028 COL23A1Q86Y22 540 aaPredicted RBP23.57■■□□□ 1.36
MCF2L-230ENST00000491028 SRP68Q9UHB9 627 aaKnown RBP23.57■■□□□ 1.36
MCF2L-230ENST00000491028 MVPQ14764 893 aaKnown RBP23.56■■□□□ 1.36
MCF2L-230ENST00000491028 NEFLP07196 543 aa23.55■■□□□ 1.36
MCF2L-230ENST00000491028 TRIM28Q13263 835 aaKnown RBP23.55■■□□□ 1.36
MCF2L-230ENST00000491028 ISCA1Q9BUE6 129 aa23.55■■□□□ 1.36
MCF2L-230ENST00000491028 BCL2L12Q9HB09 334 aa23.55■■□□□ 1.36
MCF2L-230ENST00000491028 COL24A1Q17RW2 1714 aa23.55■■□□□ 1.36
MCF2L-230ENST00000491028 IGKV5-2P06315 115 aa23.54■■□□□ 1.36
MCF2L-230ENST00000491028 ITPRIPQ8IWB1 547 aa23.54■■□□□ 1.36
MCF2L-230ENST00000491028 COG6Q9Y2V7 657 aa23.54■■□□□ 1.36
MCF2L-230ENST00000491028 NEURL1BA8MQ27 555 aa23.53■■□□□ 1.36
MCF2L-230ENST00000491028 GYS1P13807 737 aa23.53■■□□□ 1.36
MCF2L-230ENST00000491028 ZNF34Q8IZ26 560 aa23.53■■□□□ 1.36
MCF2L-230ENST00000491028 DDX19BQ9UMR2 479 aa23.53■■□□□ 1.36
MCF2L-230ENST00000491028 MSH5O43196 834 aa23.52■■□□□ 1.36
MCF2L-230ENST00000491028 PARP10Q53GL7 1025 aa23.52■■□□□ 1.36
MCF2L-230ENST00000491028 CCDC191Q8NCU4 936 aa23.52■■□□□ 1.36
MCF2L-230ENST00000491028 CHMP4BQ9H444 224 aaKnown RBP23.52■■□□□ 1.36
MCF2L-230ENST00000491028 CASZ1Q86V15 1759 aa23.52■■□□□ 1.36
MCF2L-230ENST00000491028 ATP5J2-PTCD1G3V325 749 aa23.51■■□□□ 1.35
MCF2L-230ENST00000491028 CWF19L2Q2TBE0 894 aaKnown RBP23.51■■□□□ 1.35
MCF2L-230ENST00000491028 CRBNQ96SW2 442 aa23.5■■□□□ 1.35
MCF2L-230ENST00000491028 CWC25Q9NXE8 425 aaPredicted RBP23.5■■□□□ 1.35
MCF2L-230ENST00000491028 NIP7Q9Y221 180 aaKnown RBP eCLIP23.5■■□□□ 1.35
MCF2L-230ENST00000491028 GPTP24298 496 aa23.49■■□□□ 1.35
MCF2L-230ENST00000491028 GCKRQ14397 625 aa23.49■■□□□ 1.35
MCF2L-230ENST00000491028 TBC1D9BQ66K14 1250 aa23.49■■□□□ 1.35
MCF2L-230ENST00000491028 NLRP10Q86W26 655 aa23.49■■□□□ 1.35
MCF2L-230ENST00000491028 SLC16A10Q8TF71 515 aa23.49■■□□□ 1.35
MCF2L-230ENST00000491028 UBN2Q6ZU65 1347 aa23.49■■□□□ 1.35
MCF2L-230ENST00000491028 IRX6P78412 446 aaPredicted RBP23.48■■□□□ 1.35
MCF2L-230ENST00000491028 FKBP8Q14318 412 aa23.48■■□□□ 1.35
MCF2L-230ENST00000491028 NLGN1Q8N2Q7 840 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms